RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 LINC00313P59037 77 aa7.28□□□□□ -1.24
ATP2A3-215ENST00000576957 NOTCH2NLQ7Z3S9 236 aa7.28□□□□□ -1.24
ATP2A3-215ENST00000576957 Q5W150 140 aa7.24□□□□□ -1.25
ATP2A3-215ENST00000576957 DMAC1Q96GE9 116 aa7.24□□□□□ -1.25
ATP2A3-215ENST00000576957 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
ATP2A3-215ENST00000576957 LCA10Q71F78 164 aa7.22□□□□□ -1.25
ATP2A3-215ENST00000576957 IGKV2-30P06310 120 aa7.21□□□□□ -1.26
ATP2A3-215ENST00000576957 KTN1-AS1Q86SY8 53 aa7.21□□□□□ -1.26
ATP2A3-215ENST00000576957 CRCT1Q9UGL9 99 aa7.2□□□□□ -1.26
ATP2A3-215ENST00000576957 SEC61GP60059 68 aa7.19□□□□□ -1.26
ATP2A3-215ENST00000576957 SPTSSBQ8NFR3 76 aa7.19□□□□□ -1.26
ATP2A3-215ENST00000576957 KRTAP19-2Q3LHN2 52 aa7.18□□□□□ -1.26
ATP2A3-215ENST00000576957 A6NN06 94 aa7.15□□□□□ -1.26
ATP2A3-215ENST00000576957 MT1HP80294 61 aa7.15□□□□□ -1.26
ATP2A3-215ENST00000576957 C9orf92A6NGG3 77 aa7.14□□□□□ -1.27
ATP2A3-215ENST00000576957 KRTAP16-1A8MUX0 517 aa7.13□□□□□ -1.27
ATP2A3-215ENST00000576957 A8MU10 97 aa7.12□□□□□ -1.27
ATP2A3-215ENST00000576957 SPINK7P58062 85 aa7.11□□□□□ -1.27
ATP2A3-215ENST00000576957 A0A1B0GU69 56 aa7.1□□□□□ -1.27
ATP2A3-215ENST00000576957 C7orf65Q6ZTY9 151 aa7.09□□□□□ -1.27
ATP2A3-215ENST00000576957 FSIP2Q5CZC0 6907 aa7.08□□□□□ -1.28
ATP2A3-215ENST00000576957 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
ATP2A3-215ENST00000576957 IGKV2D-30A0A075B6S6 120 aa7.05□□□□□ -1.28
ATP2A3-215ENST00000576957 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
ATP2A3-215ENST00000576957 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
ATP2A3-215ENST00000576957 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
ATP2A3-215ENST00000576957 M0R2T5 61 aa7.01□□□□□ -1.29
ATP2A3-215ENST00000576957 UQCR11O14957 56 aa7.01□□□□□ -1.29
ATP2A3-215ENST00000576957 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
ATP2A3-215ENST00000576957 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.29
ATP2A3-215ENST00000576957 MIR22HGQ0VDD5 57 aa6.96□□□□□ -1.3
ATP2A3-215ENST00000576957 RBM12B-AS1Q9P1G2 102 aa6.95□□□□□ -1.3
ATP2A3-215ENST00000576957 A8MUU9 505 aa6.87□□□□□ -1.31
ATP2A3-215ENST00000576957 C20orf166-AS1Q96NR2 134 aa6.86□□□□□ -1.31
ATP2A3-215ENST00000576957 KRTAP9-7A8MTY7 169 aa6.75□□□□□ -1.33
ATP2A3-215ENST00000576957 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
ATP2A3-215ENST00000576957 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.7□□□□□ -1.34
ATP2A3-215ENST00000576957 A0A1B0GU33 70 aa6.68□□□□□ -1.34
ATP2A3-215ENST00000576957 PRAC1Q96KF2 57 aa6.68□□□□□ -1.34
ATP2A3-215ENST00000576957 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
ATP2A3-215ENST00000576957 USH2AO75445 5202 aa6.66□□□□□ -1.34
ATP2A3-215ENST00000576957 LINC01554Q52M75 96 aa6.65□□□□□ -1.34
ATP2A3-215ENST00000576957 SSPOA2VEC9 5147 aa6.64□□□□□ -1.35
ATP2A3-215ENST00000576957 K7ERS5 55 aa6.64□□□□□ -1.35
ATP2A3-215ENST00000576957 KRTAP3-1Q9BYR8 98 aa6.63□□□□□ -1.35
ATP2A3-215ENST00000576957 H0YAA0 97 aa6.61□□□□□ -1.35
ATP2A3-215ENST00000576957 MT2AP02795 61 aa6.61□□□□□ -1.35
ATP2A3-215ENST00000576957 ADM2Q7Z4H4 148 aa6.61□□□□□ -1.35
ATP2A3-215ENST00000576957 CSAG1Q6PB30 78 aa6.56□□□□□ -1.36
ATP2A3-215ENST00000576957 FCGBPQ9Y6R7 5405 aaPredicted RBP6.55□□□□□ -1.36
ATP2A3-215ENST00000576957 MT1FP04733 61 aa6.55□□□□□ -1.36
ATP2A3-215ENST00000576957 LCE2BO14633 110 aa6.54□□□□□ -1.36
ATP2A3-215ENST00000576957 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
ATP2A3-215ENST00000576957 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
ATP2A3-215ENST00000576957 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
ATP2A3-215ENST00000576957 KRTAP25-1Q3LHN0 102 aa6.47□□□□□ -1.37
ATP2A3-215ENST00000576957 S4R3F8 94 aa6.44□□□□□ -1.38
ATP2A3-215ENST00000576957 ROMO1P60602 79 aa6.39□□□□□ -1.39
ATP2A3-215ENST00000576957 KRTAP19-6Q3LI70 58 aa6.38□□□□□ -1.39
ATP2A3-215ENST00000576957 KRTAP3-3Q9BYR6 98 aa6.37□□□□□ -1.39
ATP2A3-215ENST00000576957 KRTAP3-2Q9BYR7 98 aa6.31□□□□□ -1.4
ATP2A3-215ENST00000576957 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
ATP2A3-215ENST00000576957 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
ATP2A3-215ENST00000576957 M0QZ58 72 aa6.22□□□□□ -1.41
ATP2A3-215ENST00000576957 KRTAP13-4Q3LI77 160 aa6.22□□□□□ -1.41
ATP2A3-215ENST00000576957 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.42
ATP2A3-215ENST00000576957 A0A0D9SG42 100 aa6.2□□□□□ -1.42
ATP2A3-215ENST00000576957 P0C880 135 aa6.17□□□□□ -1.42
ATP2A3-215ENST00000576957 CRIPTQ9P021 101 aa6.15□□□□□ -1.42
ATP2A3-215ENST00000576957 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
ATP2A3-215ENST00000576957 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
ATP2A3-215ENST00000576957 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
ATP2A3-215ENST00000576957 H3BS24 57 aa6.03□□□□□ -1.44
ATP2A3-215ENST00000576957 MT1BP07438 61 aa5.95□□□□□ -1.46
ATP2A3-215ENST00000576957 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
ATP2A3-215ENST00000576957 R4GN34 69 aa5.94□□□□□ -1.46
ATP2A3-215ENST00000576957 MUC12Q9UKN1 5478 aa5.94□□□□□ -1.46
ATP2A3-215ENST00000576957 KRTAP19-8Q3LI54 63 aa5.93□□□□□ -1.46
ATP2A3-215ENST00000576957 C10orf95Q9H7T3 257 aa5.93□□□□□ -1.46
ATP2A3-215ENST00000576957 KRTAP10-5P60370 271 aa5.89□□□□□ -1.47
ATP2A3-215ENST00000576957 NEBP20929 6669 aa5.88□□□□□ -1.47
ATP2A3-215ENST00000576957 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
ATP2A3-215ENST00000576957 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
ATP2A3-215ENST00000576957 KRTAP5-9P26371 169 aa5.84□□□□□ -1.47
ATP2A3-215ENST00000576957 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
ATP2A3-215ENST00000576957 KMT2DO14686 5537 aa5.75□□□□□ -1.49
ATP2A3-215ENST00000576957 MDN1Q9NU22 5596 aa5.74□□□□□ -1.49
ATP2A3-215ENST00000576957 NDUFAF8A1L188 74 aa5.67□□□□□ -1.5
ATP2A3-215ENST00000576957 CAMK2N1Q7Z7J9 78 aa5.67□□□□□ -1.5
ATP2A3-215ENST00000576957 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.5
ATP2A3-215ENST00000576957 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.5
ATP2A3-215ENST00000576957 PLAC4Q8WY50 150 aa5.63□□□□□ -1.51
ATP2A3-215ENST00000576957 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
ATP2A3-215ENST00000576957 PRO2289Q9P1D8 64 aa5.6□□□□□ -1.51
ATP2A3-215ENST00000576957 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
ATP2A3-215ENST00000576957 SPRR2EP22531 72 aa5.56□□□□□ -1.52
ATP2A3-215ENST00000576957 SPRR2BP35325 72 aa5.56□□□□□ -1.52
ATP2A3-215ENST00000576957 SPRR2AP35326 72 aa5.56□□□□□ -1.52
ATP2A3-215ENST00000576957 MT1XP80297 61 aa5.53□□□□□ -1.52
ATP2A3-215ENST00000576957 TNP1P09430 55 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms