RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 M0R2T5 61 aa4.69□□□□□ -1.66
NPLOC4-219ENST00000576713 CCDC179H3BU77 68 aa4.67□□□□□ -1.66
NPLOC4-219ENST00000576713 FAM236DA0A1B0GTK5 79 aa4.66□□□□□ -1.66
NPLOC4-219ENST00000576713 UQCRQO14949 82 aa4.66□□□□□ -1.66
NPLOC4-219ENST00000576713 FAM236CP0DP71 79 aa4.66□□□□□ -1.66
NPLOC4-219ENST00000576713 RBM12B-AS1Q9P1G2 102 aa4.66□□□□□ -1.66
NPLOC4-219ENST00000576713 HIST1H4AP62805 103 aaKnown RBP4.65□□□□□ -1.67
NPLOC4-219ENST00000576713 LCE1FQ5T754 118 aa4.65□□□□□ -1.67
NPLOC4-219ENST00000576713 A0A087WVE0 104 aa4.64□□□□□ -1.67
NPLOC4-219ENST00000576713 ATOX1O00244 68 aa4.64□□□□□ -1.67
NPLOC4-219ENST00000576713 FAM236AA0A1B0GUQ0 79 aa4.63□□□□□ -1.67
NPLOC4-219ENST00000576713 FAM236BA0A1B0GV22 79 aa4.63□□□□□ -1.67
NPLOC4-219ENST00000576713 COX7CP15954 63 aa4.62□□□□□ -1.67
NPLOC4-219ENST00000576713 ATP5EP2Q5VTU8 51 aa4.62□□□□□ -1.67
NPLOC4-219ENST00000576713 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
NPLOC4-219ENST00000576713 FSIP2Q5CZC0 6907 aa4.62□□□□□ -1.67
NPLOC4-219ENST00000576713 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
NPLOC4-219ENST00000576713 C7orf65Q6ZTY9 151 aa4.61□□□□□ -1.67
NPLOC4-219ENST00000576713 MT2AP02795 61 aa4.59□□□□□ -1.67
NPLOC4-219ENST00000576713 C4orf26Q17RF5 130 aa4.59□□□□□ -1.67
NPLOC4-219ENST00000576713 SMIM20Q8N5G0 67 aa4.58□□□□□ -1.68
NPLOC4-219ENST00000576713 TP53AIP1Q9HCN2 124 aa4.57□□□□□ -1.68
NPLOC4-219ENST00000576713 MT1FP04733 61 aa4.56□□□□□ -1.68
NPLOC4-219ENST00000576713 TMEM258P61165 79 aa4.56□□□□□ -1.68
NPLOC4-219ENST00000576713 SERP2Q8N6R1 65 aa4.56□□□□□ -1.68
NPLOC4-219ENST00000576713 H1FX-AS1Q4G0G2 97 aa4.55□□□□□ -1.68
NPLOC4-219ENST00000576713 OCR1Q9BZK8 76 aa4.54□□□□□ -1.68
NPLOC4-219ENST00000576713 USH2AO75445 5202 aa4.53□□□□□ -1.68
NPLOC4-219ENST00000576713 TRAV22A0A0B4J277 110 aa4.53□□□□□ -1.68
NPLOC4-219ENST00000576713 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
NPLOC4-219ENST00000576713 CYP4F30PQ9H0H9 118 aa4.53□□□□□ -1.68
NPLOC4-219ENST00000576713 H0Y9P7 68 aa4.5□□□□□ -1.69
NPLOC4-219ENST00000576713 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
NPLOC4-219ENST00000576713 C5orf47Q569G3 176 aa4.49□□□□□ -1.69
NPLOC4-219ENST00000576713 C1orf64Q8NEQ6 169 aa4.49□□□□□ -1.69
NPLOC4-219ENST00000576713 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
NPLOC4-219ENST00000576713 TRAV7A0A075B6U4 112 aa4.47□□□□□ -1.69
NPLOC4-219ENST00000576713 LOC101927531A0A1B0GV80 90 aa4.47□□□□□ -1.69
NPLOC4-219ENST00000576713 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
NPLOC4-219ENST00000576713 KLKP1Q107X0 134 aa4.46□□□□□ -1.7
NPLOC4-219ENST00000576713 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
NPLOC4-219ENST00000576713 NDUFC1O43677 76 aa4.44□□□□□ -1.7
NPLOC4-219ENST00000576713 ATP5EP56381 51 aaPredicted RBP4.44□□□□□ -1.7
NPLOC4-219ENST00000576713 LCA10Q71F78 164 aa4.44□□□□□ -1.7
NPLOC4-219ENST00000576713 LINC00208Q96KT6 92 aa4.44□□□□□ -1.7
NPLOC4-219ENST00000576713 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
NPLOC4-219ENST00000576713 SERP1Q9Y6X1 66 aa4.42□□□□□ -1.7
NPLOC4-219ENST00000576713 S4R3F8 94 aa4.42□□□□□ -1.7
NPLOC4-219ENST00000576713 H7BZZ5 65 aa4.39□□□□□ -1.71
NPLOC4-219ENST00000576713 C20orf197Q8N268 126 aa4.38□□□□□ -1.71
NPLOC4-219ENST00000576713 MP68P56378 58 aa4.37□□□□□ -1.71
NPLOC4-219ENST00000576713 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
NPLOC4-219ENST00000576713 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
NPLOC4-219ENST00000576713 CSAG1Q6PB30 78 aa4.34□□□□□ -1.71
NPLOC4-219ENST00000576713 LCE3CQ5T5A8 94 aa4.33□□□□□ -1.72
NPLOC4-219ENST00000576713 FCGBPQ9Y6R7 5405 aaPredicted RBP4.32□□□□□ -1.72
NPLOC4-219ENST00000576713 H3BPC8 53 aa4.32□□□□□ -1.72
NPLOC4-219ENST00000576713 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
NPLOC4-219ENST00000576713 A8MUN3 132 aa4.29□□□□□ -1.72
NPLOC4-219ENST00000576713 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
NPLOC4-219ENST00000576713 DMAC1Q96GE9 116 aa4.28□□□□□ -1.72
NPLOC4-219ENST00000576713 SNURFQ9Y675 71 aa4.28□□□□□ -1.72
NPLOC4-219ENST00000576713 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
NPLOC4-219ENST00000576713 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
NPLOC4-219ENST00000576713 MT1BP07438 61 aa4.23□□□□□ -1.73
NPLOC4-219ENST00000576713 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
NPLOC4-219ENST00000576713 H0YAA0 97 aa4.2□□□□□ -1.74
NPLOC4-219ENST00000576713 KRTAP19-8Q3LI54 63 aa4.2□□□□□ -1.74
NPLOC4-219ENST00000576713 ADM2Q7Z4H4 148 aa4.2□□□□□ -1.74
NPLOC4-219ENST00000576713 Q1T7F1 81 aa4.19□□□□□ -1.74
NPLOC4-219ENST00000576713 P0C880 135 aa4.17□□□□□ -1.74
NPLOC4-219ENST00000576713 SPANXA2-OT1Q8N9U9 137 aa4.17□□□□□ -1.74
NPLOC4-219ENST00000576713 V9GYY9 64 aa4.17□□□□□ -1.74
NPLOC4-219ENST00000576713 ACYP2P14621 99 aa4.14□□□□□ -1.75
NPLOC4-219ENST00000576713 SYNE2Q8WXH0 6885 aaKnown RBP4.13□□□□□ -1.75
NPLOC4-219ENST00000576713 Q5VV11 94 aa4.13□□□□□ -1.75
NPLOC4-219ENST00000576713 BRK1Q8WUW1 75 aa4.12□□□□□ -1.75
NPLOC4-219ENST00000576713 CRIPTQ9P021 101 aa4.12□□□□□ -1.75
NPLOC4-219ENST00000576713 A8MU10 97 aa4.08□□□□□ -1.76
NPLOC4-219ENST00000576713 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.08□□□□□ -1.76
NPLOC4-219ENST00000576713 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
NPLOC4-219ENST00000576713 CHKB-CPT1BH3BT56 60 aa4.05□□□□□ -1.76
NPLOC4-219ENST00000576713 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
NPLOC4-219ENST00000576713 COA5Q86WW8 74 aa4.04□□□□□ -1.76
NPLOC4-219ENST00000576713 A6NN06 94 aa4.03□□□□□ -1.76
NPLOC4-219ENST00000576713 M0QZ58 72 aa4.03□□□□□ -1.76
NPLOC4-219ENST00000576713 R4GN34 69 aa4.03□□□□□ -1.76
NPLOC4-219ENST00000576713 PMAIP1Q13794 54 aa4.01□□□□□ -1.77
NPLOC4-219ENST00000576713 SPTSSBQ8NFR3 76 aa4.01□□□□□ -1.77
NPLOC4-219ENST00000576713 PSPHP1O15172 72 aa3.99□□□□□ -1.77
NPLOC4-219ENST00000576713 MT1XP80297 61 aa3.99□□□□□ -1.77
NPLOC4-219ENST00000576713 KRTAP13-4Q3LI77 160 aa3.99□□□□□ -1.77
NPLOC4-219ENST00000576713 LINC01554Q52M75 96 aa3.98□□□□□ -1.77
NPLOC4-219ENST00000576713 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
NPLOC4-219ENST00000576713 KMT2DO14686 5537 aa3.96□□□□□ -1.78
NPLOC4-219ENST00000576713 SEC61GP60059 68 aa3.95□□□□□ -1.78
NPLOC4-219ENST00000576713 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
NPLOC4-219ENST00000576713 PRR15LQ9BU68 103 aa3.95□□□□□ -1.78
NPLOC4-219ENST00000576713 CDC42SE1Q9NRR8 79 aa3.94□□□□□ -1.78
NPLOC4-219ENST00000576713 KTN1-AS1Q86SY8 53 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms