RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 TRAV7A0A075B6U4 112 aa11.38□□□□□ -0.59
LITAF-213ENST00000574701 FSIP2Q5CZC0 6907 aa11.33□□□□□ -0.6
LITAF-213ENST00000574701 KRTAP3-3Q9BYR6 98 aa11.31□□□□□ -0.6
LITAF-213ENST00000574701 NDUFC1O43677 76 aa11.28□□□□□ -0.6
LITAF-213ENST00000574701 LCE2BO14633 110 aa11.27□□□□□ -0.61
LITAF-213ENST00000574701 DMAC1Q96GE9 116 aa11.2□□□□□ -0.62
LITAF-213ENST00000574701 USH2AO75445 5202 aa11.15□□□□□ -0.62
LITAF-213ENST00000574701 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
LITAF-213ENST00000574701 SNURFQ9Y675 71 aa11.12□□□□□ -0.63
LITAF-213ENST00000574701 C20orf197Q8N268 126 aa11.06□□□□□ -0.64
LITAF-213ENST00000574701 H0YAA0 97 aa11.05□□□□□ -0.64
LITAF-213ENST00000574701 ACYP2P14621 99 aa11.02□□□□□ -0.65
LITAF-213ENST00000574701 KRTAP19-1Q8IUB9 90 aa10.99□□□□□ -0.65
LITAF-213ENST00000574701 SSPOA2VEC9 5147 aa10.98□□□□□ -0.65
LITAF-213ENST00000574701 CRIPTQ9P021 101 aa10.97□□□□□ -0.65
LITAF-213ENST00000574701 ADM2Q7Z4H4 148 aa10.95□□□□□ -0.66
LITAF-213ENST00000574701 SPRR2GQ9BYE4 73 aa10.94□□□□□ -0.66
LITAF-213ENST00000574701 SPANXA2-OT1Q8N9U9 137 aa10.93□□□□□ -0.66
LITAF-213ENST00000574701 COX7CP15954 63 aa10.9□□□□□ -0.66
LITAF-213ENST00000574701 CHKB-CPT1BH3BT56 60 aa10.88□□□□□ -0.67
LITAF-213ENST00000574701 SPTSSBQ8NFR3 76 aa10.87□□□□□ -0.67
LITAF-213ENST00000574701 KRTAP19-6Q3LI70 58 aa10.85□□□□□ -0.67
LITAF-213ENST00000574701 Q5VV11 94 aa10.84□□□□□ -0.67
LITAF-213ENST00000574701 KRTAP19-8Q3LI54 63 aa10.81□□□□□ -0.68
LITAF-213ENST00000574701 MT1BP07438 61 aa10.74□□□□□ -0.69
LITAF-213ENST00000574701 ANAPC13Q9BS18 74 aa10.74□□□□□ -0.69
LITAF-213ENST00000574701 P0C880 135 aa10.7□□□□□ -0.7
LITAF-213ENST00000574701 FCGBPQ9Y6R7 5405 aaPredicted RBP10.69□□□□□ -0.7
LITAF-213ENST00000574701 R4GN34 69 aa10.67□□□□□ -0.7
LITAF-213ENST00000574701 KRTAP3-2Q9BYR7 98 aa10.64□□□□□ -0.71
LITAF-213ENST00000574701 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.63□□□□□ -0.71
LITAF-213ENST00000574701 H7BZZ5 65 aa10.63□□□□□ -0.71
LITAF-213ENST00000574701 M0QZ58 72 aa10.6□□□□□ -0.71
LITAF-213ENST00000574701 COA5Q86WW8 74 aa10.6□□□□□ -0.71
LITAF-213ENST00000574701 CYSTM1Q9H1C7 97 aa10.6□□□□□ -0.71
LITAF-213ENST00000574701 A6NN06 94 aa10.55□□□□□ -0.72
LITAF-213ENST00000574701 CCDC179H3BU77 68 aa10.46□□□□□ -0.73
LITAF-213ENST00000574701 KRTAP10-5P60370 271 aa10.45□□□□□ -0.74
LITAF-213ENST00000574701 PLAC4Q8WY50 150 aa10.44□□□□□ -0.74
LITAF-213ENST00000574701 LINC01554Q52M75 96 aa10.42□□□□□ -0.74
LITAF-213ENST00000574701 KRTAP9-7A8MTY7 169 aa10.4□□□□□ -0.74
LITAF-213ENST00000574701 SEC61GP60059 68 aa10.34□□□□□ -0.75
LITAF-213ENST00000574701 MACF1Q9UPN3 7388 aaKnown RBP10.31□□□□□ -0.76
LITAF-213ENST00000574701 ATP5EP56381 51 aaPredicted RBP10.31□□□□□ -0.76
LITAF-213ENST00000574701 PRO2289Q9P1D8 64 aa10.29□□□□□ -0.76
LITAF-213ENST00000574701 SERP1Q9Y6X1 66 aa10.29□□□□□ -0.76
LITAF-213ENST00000574701 MT1XP80297 61 aa10.17□□□□□ -0.78
LITAF-213ENST00000574701 TMEM258P61165 79 aa10.15□□□□□ -0.78
LITAF-213ENST00000574701 KRTAP13-4Q3LI77 160 aa10.14□□□□□ -0.79
LITAF-213ENST00000574701 SYNE2Q8WXH0 6885 aaKnown RBP10.13□□□□□ -0.79
LITAF-213ENST00000574701 A0A1B0GU69 56 aa10.08□□□□□ -0.8
LITAF-213ENST00000574701 KRTAP6-3Q3LI67 103 aa10.07□□□□□ -0.8
LITAF-213ENST00000574701 A0A1B0GU33 70 aa10.06□□□□□ -0.8
LITAF-213ENST00000574701 SPATA8Q6RVD6 105 aa9.97□□□□□ -0.81
LITAF-213ENST00000574701 A0A0D9SG42 100 aa9.94□□□□□ -0.82
LITAF-213ENST00000574701 PRR15LQ9BU68 103 aa9.93□□□□□ -0.82
LITAF-213ENST00000574701 KRTAP12-2P59991 146 aa9.89□□□□□ -0.83
LITAF-213ENST00000574701 CAMK2N1Q7Z7J9 78 aa9.89□□□□□ -0.83
LITAF-213ENST00000574701 LINC01558Q9Y6Z2 57 aa9.84□□□□□ -0.83
LITAF-213ENST00000574701 SMIM26A0A096LP01 95 aa9.82□□□□□ -0.84
LITAF-213ENST00000574701 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
LITAF-213ENST00000574701 KRTAP5-9P26371 169 aa9.75□□□□□ -0.85
LITAF-213ENST00000574701 PCP4P48539 62 aa9.72□□□□□ -0.85
LITAF-213ENST00000574701 KRTAP10-7P60409 375 aaPredicted RBP9.72□□□□□ -0.85
LITAF-213ENST00000574701 KRTAP12-1P59990 96 aa9.71□□□□□ -0.86
LITAF-213ENST00000574701 KRTAP8-1Q8IUC2 63 aa9.7□□□□□ -0.86
LITAF-213ENST00000574701 KRTAP10-12P60413 245 aa9.67□□□□□ -0.86
LITAF-213ENST00000574701 A8MU10 97 aa9.66□□□□□ -0.86
LITAF-213ENST00000574701 KMT2DO14686 5537 aa9.65□□□□□ -0.87
LITAF-213ENST00000574701 SPRR2FQ96RM1 72 aa9.6□□□□□ -0.87
LITAF-213ENST00000574701 KRTAP4-8A0A0G2JLE6 195 aa9.59□□□□□ -0.87
LITAF-213ENST00000574701 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
LITAF-213ENST00000574701 UQCR11O14957 56 aa9.56□□□□□ -0.88
LITAF-213ENST00000574701 V9GYY9 64 aa9.56□□□□□ -0.88
LITAF-213ENST00000574701 MUC12Q9UKN1 5478 aa9.55□□□□□ -0.88
LITAF-213ENST00000574701 NEBP20929 6669 aa9.51□□□□□ -0.89
LITAF-213ENST00000574701 Q1T7F1 81 aa9.45□□□□□ -0.9
LITAF-213ENST00000574701 PSPHP1O15172 72 aa9.4□□□□□ -0.9
LITAF-213ENST00000574701 SPRR2EP22531 72 aa9.38□□□□□ -0.91
LITAF-213ENST00000574701 SPRR2BP35325 72 aa9.38□□□□□ -0.91
LITAF-213ENST00000574701 SPRR2AP35326 72 aa9.38□□□□□ -0.91
LITAF-213ENST00000574701 MIR22HGQ0VDD5 57 aa9.38□□□□□ -0.91
LITAF-213ENST00000574701 MDN1Q9NU22 5596 aa9.31□□□□□ -0.92
LITAF-213ENST00000574701 RPS28P62857 69 aaKnown RBP9.27□□□□□ -0.93
LITAF-213ENST00000574701 LCE1AQ5T7P2 110 aa9.25□□□□□ -0.93
LITAF-213ENST00000574701 C10orf95Q9H7T3 257 aa9.23□□□□□ -0.93
LITAF-213ENST00000574701 TNP1P09430 55 aa9.21□□□□□ -0.94
LITAF-213ENST00000574701 K7ERS5 55 aa9.2□□□□□ -0.94
LITAF-213ENST00000574701 KRTAP20-1Q3LI63 56 aa9.18□□□□□ -0.94
LITAF-213ENST00000574701 A6NED7 52 aa9.14□□□□□ -0.95
LITAF-213ENST00000574701 KRTAP19-7Q3SYF9 63 aa9.07□□□□□ -0.96
LITAF-213ENST00000574701 SPRR2DP22532 72 aa9.06□□□□□ -0.96
LITAF-213ENST00000574701 KRTAP2-3P0C7H8 128 aa9.02□□□□□ -0.97
LITAF-213ENST00000574701 KRTAP2-4Q9BYR9 128 aa9.02□□□□□ -0.97
LITAF-213ENST00000574701 MT1EP04732 61 aa9.01□□□□□ -0.97
LITAF-213ENST00000574701 KRTAP19-5Q3LI72 72 aa8.98□□□□□ -0.97
LITAF-213ENST00000574701 LCE3AQ5TA76 89 aa8.98□□□□□ -0.97
LITAF-213ENST00000574701 KRTAP25-1Q3LHN0 102 aa8.87□□□□□ -0.99
LITAF-213ENST00000574701 KRTAP19-3Q7Z4W3 81 aa8.87□□□□□ -0.99
LITAF-213ENST00000574701 LCE5AQ5TCM9 118 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms