RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 C7orf65Q6ZTY9 151 aa4.98□□□□□ -1.61
NPLOC4-216ENST00000574344 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
NPLOC4-216ENST00000574344 IGKV2D-30A0A075B6S6 120 aa4.96□□□□□ -1.62
NPLOC4-216ENST00000574344 COA5Q86WW8 74 aa4.96□□□□□ -1.62
NPLOC4-216ENST00000574344 MPLKIPQ8TAP9 179 aa4.95□□□□□ -1.62
NPLOC4-216ENST00000574344 HRES1P13985 223 aa4.94□□□□□ -1.62
NPLOC4-216ENST00000574344 ACYP2P14621 99 aa4.94□□□□□ -1.62
NPLOC4-216ENST00000574344 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
NPLOC4-216ENST00000574344 Q1T7F1 81 aa4.92□□□□□ -1.62
NPLOC4-216ENST00000574344 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
NPLOC4-216ENST00000574344 C4orf26Q17RF5 130 aa4.9□□□□□ -1.63
NPLOC4-216ENST00000574344 RBM12B-AS1Q9P1G2 102 aa4.9□□□□□ -1.63
NPLOC4-216ENST00000574344 A8MUN3 132 aa4.89□□□□□ -1.63
NPLOC4-216ENST00000574344 SPTSSBQ8NFR3 76 aa4.84□□□□□ -1.63
NPLOC4-216ENST00000574344 PRR15LQ9BU68 103 aa4.84□□□□□ -1.63
NPLOC4-216ENST00000574344 PSPHP1O15172 72 aa4.82□□□□□ -1.64
NPLOC4-216ENST00000574344 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
NPLOC4-216ENST00000574344 SPINK7P58062 85 aa4.8□□□□□ -1.64
NPLOC4-216ENST00000574344 LINC01558Q9Y6Z2 57 aa4.8□□□□□ -1.64
NPLOC4-216ENST00000574344 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
NPLOC4-216ENST00000574344 MT2AP02795 61 aa4.78□□□□□ -1.64
NPLOC4-216ENST00000574344 KRTAP10-10P60014 251 aa4.76□□□□□ -1.65
NPLOC4-216ENST00000574344 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
NPLOC4-216ENST00000574344 A0A1B0GU69 56 aa4.75□□□□□ -1.65
NPLOC4-216ENST00000574344 Q5VV11 94 aa4.75□□□□□ -1.65
NPLOC4-216ENST00000574344 MT1FP04733 61 aa4.74□□□□□ -1.65
NPLOC4-216ENST00000574344 SEC61GP60059 68 aa4.74□□□□□ -1.65
NPLOC4-216ENST00000574344 A6NED7 52 aa4.73□□□□□ -1.65
NPLOC4-216ENST00000574344 USH2AO75445 5202 aa4.69□□□□□ -1.66
NPLOC4-216ENST00000574344 SVIPQ8NHG7 77 aa4.68□□□□□ -1.66
NPLOC4-216ENST00000574344 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
NPLOC4-216ENST00000574344 LCE2BO14633 110 aa4.67□□□□□ -1.66
NPLOC4-216ENST00000574344 KRTAP9-3Q9BYQ3 159 aa4.67□□□□□ -1.66
NPLOC4-216ENST00000574344 SSPOA2VEC9 5147 aa4.66□□□□□ -1.66
NPLOC4-216ENST00000574344 CDC42SE1Q9NRR8 79 aa4.65□□□□□ -1.67
NPLOC4-216ENST00000574344 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
NPLOC4-216ENST00000574344 H1FX-AS1Q4G0G2 97 aa4.63□□□□□ -1.67
NPLOC4-216ENST00000574344 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
NPLOC4-216ENST00000574344 S4R3F8 94 aa4.63□□□□□ -1.67
NPLOC4-216ENST00000574344 UQCR11O14957 56 aa4.62□□□□□ -1.67
NPLOC4-216ENST00000574344 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
NPLOC4-216ENST00000574344 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
NPLOC4-216ENST00000574344 FCGBPQ9Y6R7 5405 aaPredicted RBP4.56□□□□□ -1.68
NPLOC4-216ENST00000574344 LCA10Q71F78 164 aa4.55□□□□□ -1.68
NPLOC4-216ENST00000574344 PMAIP1Q13794 54 aa4.52□□□□□ -1.69
NPLOC4-216ENST00000574344 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
NPLOC4-216ENST00000574344 SPATA8Q6RVD6 105 aa4.52□□□□□ -1.69
NPLOC4-216ENST00000574344 A0A1B0GU33 70 aa4.51□□□□□ -1.69
NPLOC4-216ENST00000574344 A8MU10 97 aa4.48□□□□□ -1.69
NPLOC4-216ENST00000574344 CSAG1Q6PB30 78 aa4.48□□□□□ -1.69
NPLOC4-216ENST00000574344 K7ERS5 55 aa4.45□□□□□ -1.7
NPLOC4-216ENST00000574344 KRTAP3-3Q9BYR6 98 aa4.45□□□□□ -1.7
NPLOC4-216ENST00000574344 A6NN06 94 aa4.42□□□□□ -1.7
NPLOC4-216ENST00000574344 H0YAA0 97 aa4.42□□□□□ -1.7
NPLOC4-216ENST00000574344 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
NPLOC4-216ENST00000574344 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
NPLOC4-216ENST00000574344 ADM2Q7Z4H4 148 aa4.39□□□□□ -1.71
NPLOC4-216ENST00000574344 SYNE2Q8WXH0 6885 aaKnown RBP4.35□□□□□ -1.71
NPLOC4-216ENST00000574344 M0QZ58 72 aa4.33□□□□□ -1.72
NPLOC4-216ENST00000574344 KRTAP6-3Q3LI67 103 aa4.33□□□□□ -1.72
NPLOC4-216ENST00000574344 KRTAP3-2Q9BYR7 98 aa4.33□□□□□ -1.72
NPLOC4-216ENST00000574344 MT1BP07438 61 aa4.32□□□□□ -1.72
NPLOC4-216ENST00000574344 P0C880 135 aa4.32□□□□□ -1.72
NPLOC4-216ENST00000574344 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
NPLOC4-216ENST00000574344 KRTAP19-8Q3LI54 63 aa4.3□□□□□ -1.72
NPLOC4-216ENST00000574344 A0A0D9SG42 100 aa4.28□□□□□ -1.72
NPLOC4-216ENST00000574344 R4GN34 69 aa4.28□□□□□ -1.72
NPLOC4-216ENST00000574344 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
NPLOC4-216ENST00000574344 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
NPLOC4-216ENST00000574344 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
NPLOC4-216ENST00000574344 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
NPLOC4-216ENST00000574344 ROMO1P60602 79 aa4.18□□□□□ -1.74
NPLOC4-216ENST00000574344 LINC01554Q52M75 96 aa4.18□□□□□ -1.74
NPLOC4-216ENST00000574344 KRTAP12-1P59990 96 aa4.15□□□□□ -1.75
NPLOC4-216ENST00000574344 PRAC1Q96KF2 57 aa4.15□□□□□ -1.75
NPLOC4-216ENST00000574344 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
NPLOC4-216ENST00000574344 PLAC4Q8WY50 150 aa4.11□□□□□ -1.75
NPLOC4-216ENST00000574344 PRO2289Q9P1D8 64 aa4.11□□□□□ -1.75
NPLOC4-216ENST00000574344 MUC12Q9UKN1 5478 aa4.1□□□□□ -1.75
NPLOC4-216ENST00000574344 KRTAP5-9P26371 169 aa4.1□□□□□ -1.75
NPLOC4-216ENST00000574344 KRTAP25-1Q3LHN0 102 aa4.07□□□□□ -1.76
NPLOC4-216ENST00000574344 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
NPLOC4-216ENST00000574344 CAMK2N1Q7Z7J9 78 aa4.05□□□□□ -1.76
NPLOC4-216ENST00000574344 NEBP20929 6669 aa4.05□□□□□ -1.76
NPLOC4-216ENST00000574344 MT1XP80297 61 aa4.04□□□□□ -1.76
NPLOC4-216ENST00000574344 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
NPLOC4-216ENST00000574344 KMT2DO14686 5537 aa4.02□□□□□ -1.77
NPLOC4-216ENST00000574344 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
NPLOC4-216ENST00000574344 MDN1Q9NU22 5596 aa3.98□□□□□ -1.77
NPLOC4-216ENST00000574344 SPRR2EP22531 72 aa3.98□□□□□ -1.77
NPLOC4-216ENST00000574344 SPRR2BP35325 72 aa3.98□□□□□ -1.77
NPLOC4-216ENST00000574344 SPRR2AP35326 72 aa3.98□□□□□ -1.77
NPLOC4-216ENST00000574344 KRTAP2-3P0C7H8 128 aa3.93□□□□□ -1.78
NPLOC4-216ENST00000574344 KRTAP2-4Q9BYR9 128 aa3.93□□□□□ -1.78
NPLOC4-216ENST00000574344 KRTAP4-8A0A0G2JLE6 195 aa3.89□□□□□ -1.79
NPLOC4-216ENST00000574344 KRTAP4-8Q9BYQ9 185 aa3.89□□□□□ -1.79
NPLOC4-216ENST00000574344 C10orf95Q9H7T3 257 aa3.89□□□□□ -1.79
NPLOC4-216ENST00000574344 PP632Q6XCG6 107 aa3.88□□□□□ -1.79
NPLOC4-216ENST00000574344 KRTAP10-7P60409 375 aaPredicted RBP3.87□□□□□ -1.79
NPLOC4-216ENST00000574344 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 184.3 ms