RNA–Protein interactions for RNA: ENST00000574226.5

TVP23B-206, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23B, Length 1,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-206ENST00000574226 UQCRQO14949 82 aa7.52□□□□□ -1.21
TVP23B-206ENST00000574226 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.21
TVP23B-206ENST00000574226 SPRR2GQ9BYE4 73 aa7.47□□□□□ -1.21
TVP23B-206ENST00000574226 KRTAP4-8A0A0G2JLE6 195 aa7.46□□□□□ -1.22
TVP23B-206ENST00000574226 LINC00643Q86TS7 51 aa7.46□□□□□ -1.22
TVP23B-206ENST00000574226 H0Y9P7 68 aa7.45□□□□□ -1.22
TVP23B-206ENST00000574226 KLKP1Q107X0 134 aa7.45□□□□□ -1.22
TVP23B-206ENST00000574226 Q5VV11 94 aa7.44□□□□□ -1.22
TVP23B-206ENST00000574226 CRIPTQ9P021 101 aa7.42□□□□□ -1.22
TVP23B-206ENST00000574226 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
TVP23B-206ENST00000574226 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
TVP23B-206ENST00000574226 A8MUN3 132 aa7.4□□□□□ -1.22
TVP23B-206ENST00000574226 IMUPQ9GZP8 106 aa7.4□□□□□ -1.22
TVP23B-206ENST00000574226 NDUFC1O43677 76 aa7.38□□□□□ -1.23
TVP23B-206ENST00000574226 MT1BP07438 61 aa7.37□□□□□ -1.23
TVP23B-206ENST00000574226 A0A087WVE0 104 aa7.36□□□□□ -1.23
TVP23B-206ENST00000574226 A6NN06 94 aa7.36□□□□□ -1.23
TVP23B-206ENST00000574226 H0YAA0 97 aa7.35□□□□□ -1.23
TVP23B-206ENST00000574226 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
TVP23B-206ENST00000574226 LCE4AQ5TA78 99 aa7.35□□□□□ -1.23
TVP23B-206ENST00000574226 MP68P56378 58 aa7.34□□□□□ -1.23
TVP23B-206ENST00000574226 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
TVP23B-206ENST00000574226 LINC00208Q96KT6 92 aa7.33□□□□□ -1.24
TVP23B-206ENST00000574226 SYNE2Q8WXH0 6885 aaKnown RBP7.33□□□□□ -1.24
TVP23B-206ENST00000574226 J3QR89 54 aa7.3□□□□□ -1.24
TVP23B-206ENST00000574226 LCE1DQ5T752 114 aa7.3□□□□□ -1.24
TVP23B-206ENST00000574226 OCR1Q9BZK8 76 aa7.3□□□□□ -1.24
TVP23B-206ENST00000574226 A0A1B0GV90 55 aa7.27□□□□□ -1.25
TVP23B-206ENST00000574226 H3BPC8 53 aa7.26□□□□□ -1.25
TVP23B-206ENST00000574226 KRTAP10-5P60370 271 aa7.25□□□□□ -1.25
TVP23B-206ENST00000574226 SCGB1A1P11684 91 aa7.18□□□□□ -1.26
TVP23B-206ENST00000574226 ADM2Q7Z4H4 148 aa7.18□□□□□ -1.26
TVP23B-206ENST00000574226 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
TVP23B-206ENST00000574226 C20orf197Q8N268 126 aa7.14□□□□□ -1.27
TVP23B-206ENST00000574226 DMAC1Q96GE9 116 aa7.12□□□□□ -1.27
TVP23B-206ENST00000574226 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
TVP23B-206ENST00000574226 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
TVP23B-206ENST00000574226 R4GN34 69 aa7.06□□□□□ -1.28
TVP23B-206ENST00000574226 PLAC4Q8WY50 150 aa7.04□□□□□ -1.28
TVP23B-206ENST00000574226 SMIM20Q8N5G0 67 aa7.03□□□□□ -1.28
TVP23B-206ENST00000574226 TRAV7A0A075B6U4 112 aa7.02□□□□□ -1.29
TVP23B-206ENST00000574226 KRTAP5-9P26371 169 aa7□□□□□ -1.29
TVP23B-206ENST00000574226 K7ERU9 68 aa6.98□□□□□ -1.29
TVP23B-206ENST00000574226 P0C880 135 aa6.98□□□□□ -1.29
TVP23B-206ENST00000574226 ACYP2P14621 99 aa6.98□□□□□ -1.29
TVP23B-206ENST00000574226 M0QZ58 72 aa6.96□□□□□ -1.3
TVP23B-206ENST00000574226 SPTSSBQ8NFR3 76 aa6.95□□□□□ -1.3
TVP23B-206ENST00000574226 MT-ATP8P03928 68 aa6.92□□□□□ -1.3
TVP23B-206ENST00000574226 MT1XP80297 61 aa6.91□□□□□ -1.3
TVP23B-206ENST00000574226 MUC12Q9UKN1 5478 aa6.9□□□□□ -1.31
TVP23B-206ENST00000574226 NEBP20929 6669 aa6.89□□□□□ -1.31
TVP23B-206ENST00000574226 KRTAP4-2Q9BYR5 136 aa6.88□□□□□ -1.31
TVP23B-206ENST00000574226 LCE5AQ5TCM9 118 aa6.87□□□□□ -1.31
TVP23B-206ENST00000574226 KMT2DO14686 5537 aa6.85□□□□□ -1.31
TVP23B-206ENST00000574226 KRTAP4-11Q9BYQ6 195 aa6.85□□□□□ -1.31
TVP23B-206ENST00000574226 LINC01554Q52M75 96 aa6.84□□□□□ -1.31
TVP23B-206ENST00000574226 CHKB-CPT1BH3BT56 60 aa6.83□□□□□ -1.32
TVP23B-206ENST00000574226 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
TVP23B-206ENST00000574226 KRTAP20-1Q3LI63 56 aa6.79□□□□□ -1.32
TVP23B-206ENST00000574226 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
TVP23B-206ENST00000574226 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
TVP23B-206ENST00000574226 SPRR2FQ96RM1 72 aa6.76□□□□□ -1.33
TVP23B-206ENST00000574226 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
TVP23B-206ENST00000574226 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
TVP23B-206ENST00000574226 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
TVP23B-206ENST00000574226 SPRR2EP22531 72 aa6.67□□□□□ -1.34
TVP23B-206ENST00000574226 SPRR2BP35325 72 aa6.67□□□□□ -1.34
TVP23B-206ENST00000574226 SPRR2AP35326 72 aa6.67□□□□□ -1.34
TVP23B-206ENST00000574226 KRTAP2-3P0C7H8 128 aa6.65□□□□□ -1.34
TVP23B-206ENST00000574226 KRTAP2-4Q9BYR9 128 aa6.65□□□□□ -1.34
TVP23B-206ENST00000574226 KRTAP10-12P60413 245 aa6.6□□□□□ -1.35
TVP23B-206ENST00000574226 KRTAP10-7P60409 375 aaPredicted RBP6.57□□□□□ -1.36
TVP23B-206ENST00000574226 LCE1AQ5T7P2 110 aa6.57□□□□□ -1.36
TVP23B-206ENST00000574226 SEC61GP60059 68 aa6.52□□□□□ -1.37
TVP23B-206ENST00000574226 COA5Q86WW8 74 aa6.52□□□□□ -1.37
TVP23B-206ENST00000574226 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
TVP23B-206ENST00000574226 SERP1Q9Y6X1 66 aa6.49□□□□□ -1.37
TVP23B-206ENST00000574226 COX7CP15954 63 aa6.48□□□□□ -1.37
TVP23B-206ENST00000574226 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
TVP23B-206ENST00000574226 SPRR2DP22532 72 aa6.45□□□□□ -1.38
TVP23B-206ENST00000574226 KRTAP2-2Q9BYT5 123 aa6.43□□□□□ -1.38
TVP23B-206ENST00000574226 KRTAP2-1Q9BYU5 128 aa6.43□□□□□ -1.38
TVP23B-206ENST00000574226 H7BZZ5 65 aa6.38□□□□□ -1.39
TVP23B-206ENST00000574226 A0A1B0GU33 70 aa6.35□□□□□ -1.39
TVP23B-206ENST00000574226 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
TVP23B-206ENST00000574226 A0A0D9SG42 100 aa6.32□□□□□ -1.4
TVP23B-206ENST00000574226 SPATA8Q6RVD6 105 aa6.29□□□□□ -1.4
TVP23B-206ENST00000574226 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
TVP23B-206ENST00000574226 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
TVP23B-206ENST00000574226 A0A1B0GU69 56 aa6.23□□□□□ -1.41
TVP23B-206ENST00000574226 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
TVP23B-206ENST00000574226 SMIM26A0A096LP01 95 aa6.21□□□□□ -1.42
TVP23B-206ENST00000574226 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
TVP23B-206ENST00000574226 KRTAP19-7Q3SYF9 63 aa6.18□□□□□ -1.42
TVP23B-206ENST00000574226 MT1EP04732 61 aa6.13□□□□□ -1.43
TVP23B-206ENST00000574226 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
TVP23B-206ENST00000574226 KRTAP15-1Q3LI76 137 aa6.12□□□□□ -1.43
TVP23B-206ENST00000574226 KRTAP19-3Q7Z4W3 81 aa6.12□□□□□ -1.43
TVP23B-206ENST00000574226 PRR15LQ9BU68 103 aa6.09□□□□□ -1.43
TVP23B-206ENST00000574226 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms