RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 KRTAP19-8Q3LI54 63 aa11.65□□□□□ -0.54
NPLOC4-215ENST00000574095 H0Y9P7 68 aa11.63□□□□□ -0.55
NPLOC4-215ENST00000574095 KRTAP6-3Q3LI67 103 aa11.6□□□□□ -0.55
NPLOC4-215ENST00000574095 A6NN06 94 aa11.59□□□□□ -0.55
NPLOC4-215ENST00000574095 ATOX1O00244 68 aa11.57□□□□□ -0.56
NPLOC4-215ENST00000574095 LINC00643Q86TS7 51 aa11.54□□□□□ -0.56
NPLOC4-215ENST00000574095 IMUPQ9GZP8 106 aa11.48□□□□□ -0.57
NPLOC4-215ENST00000574095 NDUFC1O43677 76 aa11.47□□□□□ -0.57
NPLOC4-215ENST00000574095 CRIPTQ9P021 101 aa11.46□□□□□ -0.57
NPLOC4-215ENST00000574095 LINC00208Q96KT6 92 aa11.44□□□□□ -0.58
NPLOC4-215ENST00000574095 KRTAP10-5P60370 271 aa11.43□□□□□ -0.58
NPLOC4-215ENST00000574095 A0A1B0GV90 55 aa11.41□□□□□ -0.58
NPLOC4-215ENST00000574095 A8MUN3 132 aa11.38□□□□□ -0.59
NPLOC4-215ENST00000574095 OCR1Q9BZK8 76 aa11.37□□□□□ -0.59
NPLOC4-215ENST00000574095 H0YAA0 97 aa11.36□□□□□ -0.59
NPLOC4-215ENST00000574095 MP68P56378 58 aa11.34□□□□□ -0.59
NPLOC4-215ENST00000574095 ADM2Q7Z4H4 148 aa11.3□□□□□ -0.6
NPLOC4-215ENST00000574095 J3QR89 54 aa11.16□□□□□ -0.62
NPLOC4-215ENST00000574095 NEBP20929 6669 aa11.14□□□□□ -0.63
NPLOC4-215ENST00000574095 MUC12Q9UKN1 5478 aa11.14□□□□□ -0.63
NPLOC4-215ENST00000574095 H3BPC8 53 aa11.14□□□□□ -0.63
NPLOC4-215ENST00000574095 SCGB1A1P11684 91 aa11.1□□□□□ -0.63
NPLOC4-215ENST00000574095 DMAC1Q96GE9 116 aa11.05□□□□□ -0.64
NPLOC4-215ENST00000574095 P0C880 135 aa11.03□□□□□ -0.64
NPLOC4-215ENST00000574095 KRTAP5-9P26371 169 aa11.03□□□□□ -0.64
NPLOC4-215ENST00000574095 R4GN34 69 aa10.99□□□□□ -0.65
NPLOC4-215ENST00000574095 PLAC4Q8WY50 150 aa10.98□□□□□ -0.65
NPLOC4-215ENST00000574095 MT1XP80297 61 aa10.95□□□□□ -0.66
NPLOC4-215ENST00000574095 C20orf197Q8N268 126 aa10.95□□□□□ -0.66
NPLOC4-215ENST00000574095 PRO2289Q9P1D8 64 aa10.94□□□□□ -0.66
NPLOC4-215ENST00000574095 M0QZ58 72 aa10.92□□□□□ -0.66
NPLOC4-215ENST00000574095 KRTAP3-2Q9BYR7 98 aa10.91□□□□□ -0.66
NPLOC4-215ENST00000574095 KMT2DO14686 5537 aa10.89□□□□□ -0.67
NPLOC4-215ENST00000574095 MT-ATP8P03928 68 aa10.83□□□□□ -0.68
NPLOC4-215ENST00000574095 TRAV7A0A075B6U4 112 aa10.81□□□□□ -0.68
NPLOC4-215ENST00000574095 MDN1Q9NU22 5596 aa10.79□□□□□ -0.68
NPLOC4-215ENST00000574095 ACYP2P14621 99 aa10.79□□□□□ -0.68
NPLOC4-215ENST00000574095 LINC01554Q52M75 96 aa10.79□□□□□ -0.68
NPLOC4-215ENST00000574095 KRTAP20-1Q3LI63 56 aa10.78□□□□□ -0.68
NPLOC4-215ENST00000574095 SMIM20Q8N5G0 67 aa10.73□□□□□ -0.69
NPLOC4-215ENST00000574095 SPRR2FQ96RM1 72 aa10.73□□□□□ -0.69
NPLOC4-215ENST00000574095 K7ERU9 68 aa10.69□□□□□ -0.7
NPLOC4-215ENST00000574095 KRTAP12-2P59991 146 aa10.66□□□□□ -0.7
NPLOC4-215ENST00000574095 KRTAP8-1Q8IUC2 63 aa10.65□□□□□ -0.7
NPLOC4-215ENST00000574095 SPTSSBQ8NFR3 76 aa10.65□□□□□ -0.7
NPLOC4-215ENST00000574095 SNURFQ9Y675 71 aa10.6□□□□□ -0.71
NPLOC4-215ENST00000574095 CHKB-CPT1BH3BT56 60 aa10.59□□□□□ -0.71
NPLOC4-215ENST00000574095 SPRR2EP22531 72 aa10.58□□□□□ -0.72
NPLOC4-215ENST00000574095 SPRR2BP35325 72 aa10.58□□□□□ -0.72
NPLOC4-215ENST00000574095 SPRR2AP35326 72 aa10.58□□□□□ -0.72
NPLOC4-215ENST00000574095 KRTAP4-8A0A0G2JLE6 195 aa10.55□□□□□ -0.72
NPLOC4-215ENST00000574095 KRTAP4-8Q9BYQ9 185 aa10.55□□□□□ -0.72
NPLOC4-215ENST00000574095 KRTAP2-3P0C7H8 128 aa10.49□□□□□ -0.73
NPLOC4-215ENST00000574095 KRTAP2-4Q9BYR9 128 aa10.49□□□□□ -0.73
NPLOC4-215ENST00000574095 KRTAP10-7P60409 375 aaPredicted RBP10.47□□□□□ -0.73
NPLOC4-215ENST00000574095 LCE1AQ5T7P2 110 aa10.42□□□□□ -0.74
NPLOC4-215ENST00000574095 SPANXA2-OT1Q8N9U9 137 aa10.41□□□□□ -0.74
NPLOC4-215ENST00000574095 KRTAP10-12P60413 245 aa10.39□□□□□ -0.75
NPLOC4-215ENST00000574095 SERP2Q8N6R1 65 aa10.36□□□□□ -0.75
NPLOC4-215ENST00000574095 KRTAP13-4Q3LI77 160 aa10.28□□□□□ -0.76
NPLOC4-215ENST00000574095 SPRR2DP22532 72 aa10.23□□□□□ -0.77
NPLOC4-215ENST00000574095 COA5Q86WW8 74 aa10.16□□□□□ -0.78
NPLOC4-215ENST00000574095 KRTAP2-2Q9BYT5 123 aa10.15□□□□□ -0.78
NPLOC4-215ENST00000574095 KRTAP2-1Q9BYU5 128 aa10.15□□□□□ -0.78
NPLOC4-215ENST00000574095 CAMK2N1Q7Z7J9 78 aa10.11□□□□□ -0.79
NPLOC4-215ENST00000574095 COX7CP15954 63 aa10.01□□□□□ -0.81
NPLOC4-215ENST00000574095 SEC61GP60059 68 aa10.01□□□□□ -0.81
NPLOC4-215ENST00000574095 SERP1Q9Y6X1 66 aa10.01□□□□□ -0.81
NPLOC4-215ENST00000574095 A0A0D9SG42 100 aa9.97□□□□□ -0.81
NPLOC4-215ENST00000574095 LCE3BQ5TA77 95 aa9.96□□□□□ -0.82
NPLOC4-215ENST00000574095 SPATA8Q6RVD6 105 aa9.93□□□□□ -0.82
NPLOC4-215ENST00000574095 CYSTM1Q9H1C7 97 aa9.92□□□□□ -0.82
NPLOC4-215ENST00000574095 H7BZZ5 65 aa9.89□□□□□ -0.83
NPLOC4-215ENST00000574095 A0A1B0GU33 70 aa9.86□□□□□ -0.83
NPLOC4-215ENST00000574095 SPINT4Q6UDR6 99 aa9.83□□□□□ -0.84
NPLOC4-215ENST00000574095 KRTAP19-7Q3SYF9 63 aa9.79□□□□□ -0.84
NPLOC4-215ENST00000574095 KRTAP12-1P59990 96 aa9.74□□□□□ -0.85
NPLOC4-215ENST00000574095 MT1EP04732 61 aa9.7□□□□□ -0.86
NPLOC4-215ENST00000574095 LCE5AQ5TCM9 118 aa9.66□□□□□ -0.86
NPLOC4-215ENST00000574095 A0A1B0GU69 56 aa9.65□□□□□ -0.86
NPLOC4-215ENST00000574095 KRTAP19-3Q7Z4W3 81 aa9.63□□□□□ -0.87
NPLOC4-215ENST00000574095 ANAPC13Q9BS18 74 aa9.6□□□□□ -0.87
NPLOC4-215ENST00000574095 SMIM26A0A096LP01 95 aa9.56□□□□□ -0.88
NPLOC4-215ENST00000574095 A8MU10 97 aa9.55□□□□□ -0.88
NPLOC4-215ENST00000574095 KRTAP19-5Q3LI72 72 aa9.54□□□□□ -0.88
NPLOC4-215ENST00000574095 DSTQ03001 7570 aaKnown RBP9.53□□□□□ -0.88
NPLOC4-215ENST00000574095 CCDC179H3BU77 68 aa9.46□□□□□ -0.9
NPLOC4-215ENST00000574095 MT1GP13640 62 aa9.4□□□□□ -0.9
NPLOC4-215ENST00000574095 C10orf95Q9H7T3 257 aa9.34□□□□□ -0.91
NPLOC4-215ENST00000574095 KRTAP4-9Q9BYQ8 210 aa9.32□□□□□ -0.92
NPLOC4-215ENST00000574095 ATP5EP56381 51 aaPredicted RBP9.3□□□□□ -0.92
NPLOC4-215ENST00000574095 PP632Q6XCG6 107 aa9.3□□□□□ -0.92
NPLOC4-215ENST00000574095 PRR15LQ9BU68 103 aa9.3□□□□□ -0.92
NPLOC4-215ENST00000574095 TNP1P09430 55 aa9.29□□□□□ -0.92
NPLOC4-215ENST00000574095 LCE3AQ5TA76 89 aa9.29□□□□□ -0.92
NPLOC4-215ENST00000574095 MT1LQ93083 61 aa9.26□□□□□ -0.93
NPLOC4-215ENST00000574095 MT1MQ8N339 61 aa9.25□□□□□ -0.93
NPLOC4-215ENST00000574095 LINC01558Q9Y6Z2 57 aa9.22□□□□□ -0.93
NPLOC4-215ENST00000574095 KRTAP4-3Q9BYR4 195 aa9.08□□□□□ -0.96
NPLOC4-215ENST00000574095 LCE1DQ5T752 114 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms