RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 SMIM20Q8N5G0 67 aa7.23□□□□□ -1.25
NPLOC4-207ENST00000572346 TRAV7A0A075B6U4 112 aa7.19□□□□□ -1.26
NPLOC4-207ENST00000572346 H3BPC8 53 aa7.19□□□□□ -1.26
NPLOC4-207ENST00000572346 H1FX-AS1Q4G0G2 97 aa7.19□□□□□ -1.26
NPLOC4-207ENST00000572346 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.27
NPLOC4-207ENST00000572346 KRTAP19-6Q3LI70 58 aa7.14□□□□□ -1.27
NPLOC4-207ENST00000572346 KLKP1Q107X0 134 aa7.11□□□□□ -1.27
NPLOC4-207ENST00000572346 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.27
NPLOC4-207ENST00000572346 KRTAP3-1Q9BYR8 98 aa7.09□□□□□ -1.27
NPLOC4-207ENST00000572346 SERP2Q8N6R1 65 aa7.08□□□□□ -1.28
NPLOC4-207ENST00000572346 S4R3F8 94 aa7.05□□□□□ -1.28
NPLOC4-207ENST00000572346 SNURFQ9Y675 71 aa7.02□□□□□ -1.29
NPLOC4-207ENST00000572346 A8MUN3 132 aa7.01□□□□□ -1.29
NPLOC4-207ENST00000572346 C20orf197Q8N268 126 aa7.01□□□□□ -1.29
NPLOC4-207ENST00000572346 LCA10Q71F78 164 aa6.97□□□□□ -1.29
NPLOC4-207ENST00000572346 COX7CP15954 63 aa6.96□□□□□ -1.3
NPLOC4-207ENST00000572346 KRTAP6-3Q3LI67 103 aa6.96□□□□□ -1.3
NPLOC4-207ENST00000572346 CSAG1Q6PB30 78 aa6.96□□□□□ -1.3
NPLOC4-207ENST00000572346 ANAPC13Q9BS18 74 aa6.94□□□□□ -1.3
NPLOC4-207ENST00000572346 DMAC1Q96GE9 116 aa6.92□□□□□ -1.3
NPLOC4-207ENST00000572346 NDUFC1O43677 76 aa6.9□□□□□ -1.3
NPLOC4-207ENST00000572346 ACYP2P14621 99 aa6.87□□□□□ -1.31
NPLOC4-207ENST00000572346 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
NPLOC4-207ENST00000572346 SPANXA2-OT1Q8N9U9 137 aa6.85□□□□□ -1.31
NPLOC4-207ENST00000572346 CHKB-CPT1BH3BT56 60 aa6.78□□□□□ -1.32
NPLOC4-207ENST00000572346 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
NPLOC4-207ENST00000572346 H7BZZ5 65 aa6.74□□□□□ -1.33
NPLOC4-207ENST00000572346 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
NPLOC4-207ENST00000572346 CYSTM1Q9H1C7 97 aa6.74□□□□□ -1.33
NPLOC4-207ENST00000572346 A6NN06 94 aa6.7□□□□□ -1.34
NPLOC4-207ENST00000572346 MT1BP07438 61 aa6.69□□□□□ -1.34
NPLOC4-207ENST00000572346 H0YAA0 97 aa6.68□□□□□ -1.34
NPLOC4-207ENST00000572346 ADM2Q7Z4H4 148 aa6.67□□□□□ -1.34
NPLOC4-207ENST00000572346 NEBP20929 6669 aa6.67□□□□□ -1.34
NPLOC4-207ENST00000572346 COA5Q86WW8 74 aa6.65□□□□□ -1.34
NPLOC4-207ENST00000572346 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
NPLOC4-207ENST00000572346 Q5VV11 94 aa6.64□□□□□ -1.35
NPLOC4-207ENST00000572346 KRTAP19-8Q3LI54 63 aa6.63□□□□□ -1.35
NPLOC4-207ENST00000572346 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
NPLOC4-207ENST00000572346 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
NPLOC4-207ENST00000572346 ATP5EP56381 51 aaPredicted RBP6.58□□□□□ -1.36
NPLOC4-207ENST00000572346 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
NPLOC4-207ENST00000572346 KRTAP20-1Q3LI63 56 aa6.57□□□□□ -1.36
NPLOC4-207ENST00000572346 KRTAP5-9P26371 169 aa6.54□□□□□ -1.36
NPLOC4-207ENST00000572346 P0C880 135 aa6.53□□□□□ -1.36
NPLOC4-207ENST00000572346 TMEM258P61165 79 aa6.53□□□□□ -1.36
NPLOC4-207ENST00000572346 SVIPQ8NHG7 77 aa6.51□□□□□ -1.37
NPLOC4-207ENST00000572346 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
NPLOC4-207ENST00000572346 R4GN34 69 aa6.49□□□□□ -1.37
NPLOC4-207ENST00000572346 KMT2DO14686 5537 aa6.46□□□□□ -1.38
NPLOC4-207ENST00000572346 SEC61GP60059 68 aa6.46□□□□□ -1.38
NPLOC4-207ENST00000572346 M0QZ58 72 aa6.45□□□□□ -1.38
NPLOC4-207ENST00000572346 RPS28P62857 69 aaKnown RBP6.45□□□□□ -1.38
NPLOC4-207ENST00000572346 SERP1Q9Y6X1 66 aa6.44□□□□□ -1.38
NPLOC4-207ENST00000572346 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
NPLOC4-207ENST00000572346 LINC01554Q52M75 96 aa6.36□□□□□ -1.39
NPLOC4-207ENST00000572346 A0A1B0GU69 56 aa6.34□□□□□ -1.39
NPLOC4-207ENST00000572346 KRTAP2-3P0C7H8 128 aa6.33□□□□□ -1.4
NPLOC4-207ENST00000572346 KRTAP2-4Q9BYR9 128 aa6.33□□□□□ -1.4
NPLOC4-207ENST00000572346 PLAC4Q8WY50 150 aa6.3□□□□□ -1.4
NPLOC4-207ENST00000572346 PRR15LQ9BU68 103 aa6.28□□□□□ -1.4
NPLOC4-207ENST00000572346 A0A1B0GU33 70 aa6.27□□□□□ -1.41
NPLOC4-207ENST00000572346 SPRR2FQ96RM1 72 aa6.27□□□□□ -1.41
NPLOC4-207ENST00000572346 SPRR2EP22531 72 aa6.24□□□□□ -1.41
NPLOC4-207ENST00000572346 SPRR2BP35325 72 aa6.24□□□□□ -1.41
NPLOC4-207ENST00000572346 SPRR2AP35326 72 aa6.24□□□□□ -1.41
NPLOC4-207ENST00000572346 LINC01558Q9Y6Z2 57 aa6.24□□□□□ -1.41
NPLOC4-207ENST00000572346 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
NPLOC4-207ENST00000572346 PRO2289Q9P1D8 64 aa6.21□□□□□ -1.42
NPLOC4-207ENST00000572346 MT1XP80297 61 aa6.2□□□□□ -1.42
NPLOC4-207ENST00000572346 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
NPLOC4-207ENST00000572346 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
NPLOC4-207ENST00000572346 A0A0D9SG42 100 aa6.16□□□□□ -1.42
NPLOC4-207ENST00000572346 KRTAP8-1Q8IUC2 63 aa6.16□□□□□ -1.42
NPLOC4-207ENST00000572346 V9GYY9 64 aa6.14□□□□□ -1.43
NPLOC4-207ENST00000572346 LCE1AQ5T7P2 110 aa6.13□□□□□ -1.43
NPLOC4-207ENST00000572346 KRTAP2-2Q9BYT5 123 aa6.11□□□□□ -1.43
NPLOC4-207ENST00000572346 KRTAP2-1Q9BYU5 128 aa6.11□□□□□ -1.43
NPLOC4-207ENST00000572346 KRTAP12-2P59991 146 aa6.09□□□□□ -1.43
NPLOC4-207ENST00000572346 Q1T7F1 81 aa6.07□□□□□ -1.44
NPLOC4-207ENST00000572346 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
NPLOC4-207ENST00000572346 UQCR11O14957 56 aa6.05□□□□□ -1.44
NPLOC4-207ENST00000572346 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
NPLOC4-207ENST00000572346 PSPHP1O15172 72 aa6.04□□□□□ -1.44
NPLOC4-207ENST00000572346 SPRR2DP22532 72 aa6.04□□□□□ -1.44
NPLOC4-207ENST00000572346 KRTAP4-8A0A0G2JLE6 195 aa6.03□□□□□ -1.44
NPLOC4-207ENST00000572346 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
NPLOC4-207ENST00000572346 A8MU10 97 aa6.02□□□□□ -1.45
NPLOC4-207ENST00000572346 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
NPLOC4-207ENST00000572346 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
NPLOC4-207ENST00000572346 MIR22HGQ0VDD5 57 aa5.94□□□□□ -1.46
NPLOC4-207ENST00000572346 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
NPLOC4-207ENST00000572346 LCE3BQ5TA77 95 aa5.9□□□□□ -1.46
NPLOC4-207ENST00000572346 A6NED7 52 aa5.88□□□□□ -1.47
NPLOC4-207ENST00000572346 KRTAP10-12P60413 245 aa5.88□□□□□ -1.47
NPLOC4-207ENST00000572346 BRK1Q8WUW1 75 aa5.83□□□□□ -1.48
NPLOC4-207ENST00000572346 K7ERS5 55 aa5.82□□□□□ -1.48
NPLOC4-207ENST00000572346 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
NPLOC4-207ENST00000572346 TNP1P09430 55 aa5.66□□□□□ -1.5
NPLOC4-207ENST00000572346 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms