RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 A6NN06 94 aa7.6□□□□□ -1.19
MAP1LC3B-208ENST00000570189 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
MAP1LC3B-208ENST00000570189 ATOX1O00244 68 aa7.58□□□□□ -1.2
MAP1LC3B-208ENST00000570189 UQCRQO14949 82 aa7.58□□□□□ -1.2
MAP1LC3B-208ENST00000570189 A0A087WVE0 104 aa7.56□□□□□ -1.2
MAP1LC3B-208ENST00000570189 KRTAP10-5P60370 271 aa7.56□□□□□ -1.2
MAP1LC3B-208ENST00000570189 H0YAA0 97 aa7.54□□□□□ -1.2
MAP1LC3B-208ENST00000570189 IMUPQ9GZP8 106 aa7.53□□□□□ -1.2
MAP1LC3B-208ENST00000570189 HIST1H4AP62805 103 aaKnown RBP7.52□□□□□ -1.21
MAP1LC3B-208ENST00000570189 H0Y9P7 68 aa7.51□□□□□ -1.21
MAP1LC3B-208ENST00000570189 A8MUN3 132 aa7.49□□□□□ -1.21
MAP1LC3B-208ENST00000570189 NDUFC1O43677 76 aa7.48□□□□□ -1.21
MAP1LC3B-208ENST00000570189 LINC00643Q86TS7 51 aa7.47□□□□□ -1.21
MAP1LC3B-208ENST00000570189 OCR1Q9BZK8 76 aa7.4□□□□□ -1.22
MAP1LC3B-208ENST00000570189 KRTAP5-9P26371 169 aa7.38□□□□□ -1.23
MAP1LC3B-208ENST00000570189 LINC00208Q96KT6 92 aa7.38□□□□□ -1.23
MAP1LC3B-208ENST00000570189 MUC12Q9UKN1 5478 aa7.37□□□□□ -1.23
MAP1LC3B-208ENST00000570189 MP68P56378 58 aa7.35□□□□□ -1.23
MAP1LC3B-208ENST00000570189 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
MAP1LC3B-208ENST00000570189 KRTAP4-6Q9BYQ5 205 aa7.34□□□□□ -1.23
MAP1LC3B-208ENST00000570189 ADM2Q7Z4H4 148 aa7.32□□□□□ -1.24
MAP1LC3B-208ENST00000570189 NEBP20929 6669 aa7.31□□□□□ -1.24
MAP1LC3B-208ENST00000570189 H3BPC8 53 aa7.3□□□□□ -1.24
MAP1LC3B-208ENST00000570189 A0A1B0GV90 55 aa7.24□□□□□ -1.25
MAP1LC3B-208ENST00000570189 DMAC1Q96GE9 116 aa7.23□□□□□ -1.25
MAP1LC3B-208ENST00000570189 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
MAP1LC3B-208ENST00000570189 KMT2DO14686 5537 aa7.23□□□□□ -1.25
MAP1LC3B-208ENST00000570189 J3QR89 54 aa7.21□□□□□ -1.26
MAP1LC3B-208ENST00000570189 C20orf197Q8N268 126 aa7.21□□□□□ -1.26
MAP1LC3B-208ENST00000570189 MT1XP80297 61 aa7.2□□□□□ -1.26
MAP1LC3B-208ENST00000570189 R4GN34 69 aa7.17□□□□□ -1.26
MAP1LC3B-208ENST00000570189 MDN1Q9NU22 5596 aa7.16□□□□□ -1.26
MAP1LC3B-208ENST00000570189 P0C880 135 aa7.16□□□□□ -1.26
MAP1LC3B-208ENST00000570189 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
MAP1LC3B-208ENST00000570189 KRTAP20-1Q3LI63 56 aa7.14□□□□□ -1.27
MAP1LC3B-208ENST00000570189 SCGB1A1P11684 91 aa7.12□□□□□ -1.27
MAP1LC3B-208ENST00000570189 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
MAP1LC3B-208ENST00000570189 TRAV7A0A075B6U4 112 aa7.09□□□□□ -1.27
MAP1LC3B-208ENST00000570189 M0QZ58 72 aa7.09□□□□□ -1.27
MAP1LC3B-208ENST00000570189 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
MAP1LC3B-208ENST00000570189 ACYP2P14621 99 aa7□□□□□ -1.29
MAP1LC3B-208ENST00000570189 SMIM20Q8N5G0 67 aa7□□□□□ -1.29
MAP1LC3B-208ENST00000570189 KRTAP8-1Q8IUC2 63 aa6.99□□□□□ -1.29
MAP1LC3B-208ENST00000570189 KRTAP2-3P0C7H8 128 aa6.96□□□□□ -1.3
MAP1LC3B-208ENST00000570189 KRTAP2-4Q9BYR9 128 aa6.96□□□□□ -1.3
MAP1LC3B-208ENST00000570189 SPTSSBQ8NFR3 76 aa6.95□□□□□ -1.3
MAP1LC3B-208ENST00000570189 SPRR2EP22531 72 aa6.94□□□□□ -1.3
MAP1LC3B-208ENST00000570189 SPRR2BP35325 72 aa6.94□□□□□ -1.3
MAP1LC3B-208ENST00000570189 SPRR2AP35326 72 aa6.94□□□□□ -1.3
MAP1LC3B-208ENST00000570189 MT-ATP8P03928 68 aa6.92□□□□□ -1.3
MAP1LC3B-208ENST00000570189 LINC01554Q52M75 96 aa6.92□□□□□ -1.3
MAP1LC3B-208ENST00000570189 LCE1AQ5T7P2 110 aa6.89□□□□□ -1.31
MAP1LC3B-208ENST00000570189 K7ERU9 68 aa6.88□□□□□ -1.31
MAP1LC3B-208ENST00000570189 KRTAP10-12P60413 245 aa6.87□□□□□ -1.31
MAP1LC3B-208ENST00000570189 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
MAP1LC3B-208ENST00000570189 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
MAP1LC3B-208ENST00000570189 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
MAP1LC3B-208ENST00000570189 CHKB-CPT1BH3BT56 60 aa6.81□□□□□ -1.32
MAP1LC3B-208ENST00000570189 SPANXA2-OT1Q8N9U9 137 aa6.81□□□□□ -1.32
MAP1LC3B-208ENST00000570189 SNURFQ9Y675 71 aa6.76□□□□□ -1.33
MAP1LC3B-208ENST00000570189 KRTAP2-2Q9BYT5 123 aa6.74□□□□□ -1.33
MAP1LC3B-208ENST00000570189 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
MAP1LC3B-208ENST00000570189 SPRR2DP22532 72 aa6.72□□□□□ -1.33
MAP1LC3B-208ENST00000570189 SERP2Q8N6R1 65 aa6.69□□□□□ -1.34
MAP1LC3B-208ENST00000570189 KRTAP13-4Q3LI77 160 aa6.66□□□□□ -1.34
MAP1LC3B-208ENST00000570189 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
MAP1LC3B-208ENST00000570189 COA5Q86WW8 74 aa6.55□□□□□ -1.36
MAP1LC3B-208ENST00000570189 CAMK2N1Q7Z7J9 78 aa6.54□□□□□ -1.36
MAP1LC3B-208ENST00000570189 SEC61GP60059 68 aa6.47□□□□□ -1.37
MAP1LC3B-208ENST00000570189 SERP1Q9Y6X1 66 aa6.46□□□□□ -1.38
MAP1LC3B-208ENST00000570189 COX7CP15954 63 aa6.45□□□□□ -1.38
MAP1LC3B-208ENST00000570189 KRTAP19-7Q3SYF9 63 aa6.44□□□□□ -1.38
MAP1LC3B-208ENST00000570189 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
MAP1LC3B-208ENST00000570189 H7BZZ5 65 aa6.39□□□□□ -1.39
MAP1LC3B-208ENST00000570189 A0A1B0GU33 70 aa6.38□□□□□ -1.39
MAP1LC3B-208ENST00000570189 MT1EP04732 61 aa6.38□□□□□ -1.39
MAP1LC3B-208ENST00000570189 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
MAP1LC3B-208ENST00000570189 A0A0D9SG42 100 aa6.36□□□□□ -1.39
MAP1LC3B-208ENST00000570189 KRTAP19-3Q7Z4W3 81 aa6.36□□□□□ -1.39
MAP1LC3B-208ENST00000570189 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
MAP1LC3B-208ENST00000570189 CYSTM1Q9H1C7 97 aa6.33□□□□□ -1.4
MAP1LC3B-208ENST00000570189 SPINT4Q6UDR6 99 aa6.29□□□□□ -1.4
MAP1LC3B-208ENST00000570189 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
MAP1LC3B-208ENST00000570189 A0A1B0GU69 56 aa6.21□□□□□ -1.42
MAP1LC3B-208ENST00000570189 MT1GP13640 62 aa6.21□□□□□ -1.42
MAP1LC3B-208ENST00000570189 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
MAP1LC3B-208ENST00000570189 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
MAP1LC3B-208ENST00000570189 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
MAP1LC3B-208ENST00000570189 DSTQ03001 7570 aaKnown RBP6.16□□□□□ -1.42
MAP1LC3B-208ENST00000570189 PP632Q6XCG6 107 aa6.15□□□□□ -1.42
MAP1LC3B-208ENST00000570189 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
MAP1LC3B-208ENST00000570189 ANAPC13Q9BS18 74 aa6.11□□□□□ -1.43
MAP1LC3B-208ENST00000570189 A8MU10 97 aa6.1□□□□□ -1.43
MAP1LC3B-208ENST00000570189 MT1MQ8N339 61 aa6.08□□□□□ -1.44
MAP1LC3B-208ENST00000570189 MT1LQ93083 61 aa6.08□□□□□ -1.44
MAP1LC3B-208ENST00000570189 ATP5EP56381 51 aaPredicted RBP6.06□□□□□ -1.44
MAP1LC3B-208ENST00000570189 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
MAP1LC3B-208ENST00000570189 TNP1P09430 55 aa6.05□□□□□ -1.44
MAP1LC3B-208ENST00000570189 C10orf95Q9H7T3 257 aa6.05□□□□□ -1.44
MAP1LC3B-208ENST00000570189 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms