RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 C1orf64Q8NEQ6 169 aa6.56□□□□□ -1.36
HERPUD1-218ENST00000569569 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
HERPUD1-218ENST00000569569 CYP4F30PQ9H0H9 118 aa6.54□□□□□ -1.36
HERPUD1-218ENST00000569569 UQCRQO14949 82 aa6.53□□□□□ -1.36
HERPUD1-218ENST00000569569 A0A087WVE0 104 aa6.52□□□□□ -1.37
HERPUD1-218ENST00000569569 LOC101927531A0A1B0GV80 90 aa6.52□□□□□ -1.37
HERPUD1-218ENST00000569569 J3QR89 54 aa6.52□□□□□ -1.37
HERPUD1-218ENST00000569569 USH2AO75445 5202 aa6.51□□□□□ -1.37
HERPUD1-218ENST00000569569 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
HERPUD1-218ENST00000569569 S4R3F8 94 aa6.49□□□□□ -1.37
HERPUD1-218ENST00000569569 ATOX1O00244 68 aa6.48□□□□□ -1.37
HERPUD1-218ENST00000569569 H0Y9P7 68 aa6.47□□□□□ -1.37
HERPUD1-218ENST00000569569 C5orf47Q569G3 176 aa6.47□□□□□ -1.37
HERPUD1-218ENST00000569569 CSAG1Q6PB30 78 aa6.45□□□□□ -1.38
HERPUD1-218ENST00000569569 LCA10Q71F78 164 aa6.45□□□□□ -1.38
HERPUD1-218ENST00000569569 SSPOA2VEC9 5147 aa6.43□□□□□ -1.38
HERPUD1-218ENST00000569569 OCR1Q9BZK8 76 aa6.41□□□□□ -1.38
HERPUD1-218ENST00000569569 LINC00208Q96KT6 92 aa6.39□□□□□ -1.39
HERPUD1-218ENST00000569569 MP68P56378 58 aa6.38□□□□□ -1.39
HERPUD1-218ENST00000569569 FAM236AA0A1B0GUQ0 79 aa6.37□□□□□ -1.39
HERPUD1-218ENST00000569569 FAM236BA0A1B0GV22 79 aa6.37□□□□□ -1.39
HERPUD1-218ENST00000569569 SCGB1A1P11684 91 aa6.33□□□□□ -1.4
HERPUD1-218ENST00000569569 KLKP1Q107X0 134 aa6.33□□□□□ -1.4
HERPUD1-218ENST00000569569 A8MUN3 132 aa6.32□□□□□ -1.4
HERPUD1-218ENST00000569569 H3BPC8 53 aa6.31□□□□□ -1.4
HERPUD1-218ENST00000569569 K7ERU9 68 aa6.31□□□□□ -1.4
HERPUD1-218ENST00000569569 IMUPQ9GZP8 106 aa6.3□□□□□ -1.4
HERPUD1-218ENST00000569569 KRTAP19-6Q3LI70 58 aa6.29□□□□□ -1.4
HERPUD1-218ENST00000569569 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
HERPUD1-218ENST00000569569 NDUFC1O43677 76 aa6.28□□□□□ -1.4
HERPUD1-218ENST00000569569 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
HERPUD1-218ENST00000569569 SPRR2GQ9BYE4 73 aa6.23□□□□□ -1.41
HERPUD1-218ENST00000569569 H0YAA0 97 aa6.2□□□□□ -1.42
HERPUD1-218ENST00000569569 SMIM20Q8N5G0 67 aa6.19□□□□□ -1.42
HERPUD1-218ENST00000569569 CRIPTQ9P021 101 aa6.19□□□□□ -1.42
HERPUD1-218ENST00000569569 TRAV7A0A075B6U4 112 aa6.17□□□□□ -1.42
HERPUD1-218ENST00000569569 KRTAP19-8Q3LI54 63 aa6.17□□□□□ -1.42
HERPUD1-218ENST00000569569 Q5VV11 94 aa6.17□□□□□ -1.42
HERPUD1-218ENST00000569569 DMAC1Q96GE9 116 aa6.16□□□□□ -1.42
HERPUD1-218ENST00000569569 MT1BP07438 61 aa6.15□□□□□ -1.42
HERPUD1-218ENST00000569569 PCP4P48539 62 aa6.15□□□□□ -1.42
HERPUD1-218ENST00000569569 ADM2Q7Z4H4 148 aa6.12□□□□□ -1.43
HERPUD1-218ENST00000569569 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
HERPUD1-218ENST00000569569 A6NN06 94 aa6.06□□□□□ -1.44
HERPUD1-218ENST00000569569 ACYP2P14621 99 aa6.06□□□□□ -1.44
HERPUD1-218ENST00000569569 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
HERPUD1-218ENST00000569569 SNURFQ9Y675 71 aa6.02□□□□□ -1.45
HERPUD1-218ENST00000569569 C20orf197Q8N268 126 aa6.01□□□□□ -1.45
HERPUD1-218ENST00000569569 SERP2Q8N6R1 65 aa6□□□□□ -1.45
HERPUD1-218ENST00000569569 P0C880 135 aa5.99□□□□□ -1.45
HERPUD1-218ENST00000569569 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
HERPUD1-218ENST00000569569 SPTSSBQ8NFR3 76 aa5.97□□□□□ -1.45
HERPUD1-218ENST00000569569 R4GN34 69 aa5.97□□□□□ -1.45
HERPUD1-218ENST00000569569 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
HERPUD1-218ENST00000569569 CHKB-CPT1BH3BT56 60 aa5.93□□□□□ -1.46
HERPUD1-218ENST00000569569 M0QZ58 72 aa5.92□□□□□ -1.46
HERPUD1-218ENST00000569569 KRTAP6-3Q3LI67 103 aa5.91□□□□□ -1.46
HERPUD1-218ENST00000569569 A0A0A0MQY5 61 aa5.89□□□□□ -1.47
HERPUD1-218ENST00000569569 PLAC4Q8WY50 150 aa5.89□□□□□ -1.47
HERPUD1-218ENST00000569569 COX7CP15954 63 aa5.84□□□□□ -1.47
HERPUD1-218ENST00000569569 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
HERPUD1-218ENST00000569569 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
HERPUD1-218ENST00000569569 MT1XP80297 61 aa5.79□□□□□ -1.48
HERPUD1-218ENST00000569569 COA5Q86WW8 74 aa5.75□□□□□ -1.49
HERPUD1-218ENST00000569569 H7BZZ5 65 aa5.72□□□□□ -1.49
HERPUD1-218ENST00000569569 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
HERPUD1-218ENST00000569569 CYSTM1Q9H1C7 97 aa5.7□□□□□ -1.5
HERPUD1-218ENST00000569569 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
HERPUD1-218ENST00000569569 ANAPC13Q9BS18 74 aa5.68□□□□□ -1.5
HERPUD1-218ENST00000569569 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
HERPUD1-218ENST00000569569 SEC61GP60059 68 aa5.65□□□□□ -1.5
HERPUD1-218ENST00000569569 SERP1Q9Y6X1 66 aa5.64□□□□□ -1.51
HERPUD1-218ENST00000569569 MUC12Q9UKN1 5478 aa5.64□□□□□ -1.51
HERPUD1-218ENST00000569569 KRTAP13-4Q3LI77 160 aa5.63□□□□□ -1.51
HERPUD1-218ENST00000569569 KMT2DO14686 5537 aa5.62□□□□□ -1.51
HERPUD1-218ENST00000569569 NEBP20929 6669 aa5.61□□□□□ -1.51
HERPUD1-218ENST00000569569 CCDC179H3BU77 68 aa5.56□□□□□ -1.52
HERPUD1-218ENST00000569569 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
HERPUD1-218ENST00000569569 SPRR2FQ96RM1 72 aa5.54□□□□□ -1.52
HERPUD1-218ENST00000569569 A0A1B0GU33 70 aa5.53□□□□□ -1.52
HERPUD1-218ENST00000569569 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
HERPUD1-218ENST00000569569 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
HERPUD1-218ENST00000569569 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
HERPUD1-218ENST00000569569 SPATA8Q6RVD6 105 aa5.49□□□□□ -1.53
HERPUD1-218ENST00000569569 A0A0D9SG42 100 aa5.48□□□□□ -1.53
HERPUD1-218ENST00000569569 ATP5EP56381 51 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-218ENST00000569569 MDN1Q9NU22 5596 aa5.47□□□□□ -1.53
HERPUD1-218ENST00000569569 A0A1B0GU69 56 aa5.47□□□□□ -1.53
HERPUD1-218ENST00000569569 SPRR2EP22531 72 aa5.43□□□□□ -1.54
HERPUD1-218ENST00000569569 SPRR2BP35325 72 aa5.43□□□□□ -1.54
HERPUD1-218ENST00000569569 SPRR2AP35326 72 aa5.43□□□□□ -1.54
HERPUD1-218ENST00000569569 KRTAP20-1Q3LI63 56 aa5.41□□□□□ -1.54
HERPUD1-218ENST00000569569 SPINT4Q6UDR6 99 aa5.41□□□□□ -1.54
HERPUD1-218ENST00000569569 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
HERPUD1-218ENST00000569569 KRTAP12-1P59990 96 aa5.37□□□□□ -1.55
HERPUD1-218ENST00000569569 TMEM258P61165 79 aa5.37□□□□□ -1.55
HERPUD1-218ENST00000569569 LCE1AQ5T7P2 110 aa5.37□□□□□ -1.55
HERPUD1-218ENST00000569569 PRR15LQ9BU68 103 aa5.35□□□□□ -1.55
HERPUD1-218ENST00000569569 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
HERPUD1-218ENST00000569569 KRTAP2-4Q9BYR9 128 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms