RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 A6NN06 94 aa6.7□□□□□ -1.34
NSMCE1-214ENST00000569236 Q1T7F1 81 aa6.7□□□□□ -1.34
NSMCE1-214ENST00000569236 ATP11AUNQ6ZP68 121 aa6.69□□□□□ -1.34
NSMCE1-214ENST00000569236 FAT4Q6V0I7 4981 aa6.68□□□□□ -1.34
NSMCE1-214ENST00000569236 IGKV2-30P06310 120 aa6.64□□□□□ -1.35
NSMCE1-214ENST00000569236 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
NSMCE1-214ENST00000569236 A8MUU9 505 aa6.62□□□□□ -1.35
NSMCE1-214ENST00000569236 MPLKIPQ8TAP9 179 aa6.59□□□□□ -1.35
NSMCE1-214ENST00000569236 LCE2AQ5TA79 106 aaPredicted RBP6.57□□□□□ -1.36
NSMCE1-214ENST00000569236 LCE2BO14633 110 aa6.57□□□□□ -1.36
NSMCE1-214ENST00000569236 HRES1P13985 223 aa6.57□□□□□ -1.36
NSMCE1-214ENST00000569236 COA5Q86WW8 74 aa6.56□□□□□ -1.36
NSMCE1-214ENST00000569236 IGKV2D-30A0A075B6S6 120 aa6.54□□□□□ -1.36
NSMCE1-214ENST00000569236 DMAC1Q96GE9 116 aa6.53□□□□□ -1.36
NSMCE1-214ENST00000569236 KRTAP19-2Q3LHN2 52 aa6.52□□□□□ -1.37
NSMCE1-214ENST00000569236 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
NSMCE1-214ENST00000569236 ACYP2P14621 99 aa6.49□□□□□ -1.37
NSMCE1-214ENST00000569236 COX6B2Q6YFQ2 88 aa6.48□□□□□ -1.37
NSMCE1-214ENST00000569236 MT1HP80294 61 aa6.43□□□□□ -1.38
NSMCE1-214ENST00000569236 SPINK7P58062 85 aa6.41□□□□□ -1.38
NSMCE1-214ENST00000569236 CHKB-CPT1BH3BT56 60 aa6.38□□□□□ -1.39
NSMCE1-214ENST00000569236 Q5VV11 94 aa6.38□□□□□ -1.39
NSMCE1-214ENST00000569236 CDC42SE1Q9NRR8 79 aa6.38□□□□□ -1.39
NSMCE1-214ENST00000569236 M0R2T5 61 aa6.36□□□□□ -1.39
NSMCE1-214ENST00000569236 SPTSSBQ8NFR3 76 aa6.36□□□□□ -1.39
NSMCE1-214ENST00000569236 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
NSMCE1-214ENST00000569236 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
NSMCE1-214ENST00000569236 PRR15LQ9BU68 103 aa6.33□□□□□ -1.4
NSMCE1-214ENST00000569236 A8MU10 97 aa6.31□□□□□ -1.4
NSMCE1-214ENST00000569236 KRTAP3-1Q9BYR8 98 aa6.29□□□□□ -1.4
NSMCE1-214ENST00000569236 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
NSMCE1-214ENST00000569236 LORP23490 312 aaPredicted RBP6.26□□□□□ -1.41
NSMCE1-214ENST00000569236 KRTAP9-2Q9BYQ4 174 aa6.26□□□□□ -1.41
NSMCE1-214ENST00000569236 ROMO1P60602 79 aa6.23□□□□□ -1.41
NSMCE1-214ENST00000569236 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.41
NSMCE1-214ENST00000569236 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
NSMCE1-214ENST00000569236 A0A1B0GU69 56 aa6.2□□□□□ -1.42
NSMCE1-214ENST00000569236 A6NED7 52 aa6.17□□□□□ -1.42
NSMCE1-214ENST00000569236 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
NSMCE1-214ENST00000569236 H1FX-AS1Q4G0G2 97 aa6.1□□□□□ -1.43
NSMCE1-214ENST00000569236 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
NSMCE1-214ENST00000569236 S4R3F8 94 aa6.06□□□□□ -1.44
NSMCE1-214ENST00000569236 FSIP2Q5CZC0 6907 aa6.06□□□□□ -1.44
NSMCE1-214ENST00000569236 K7ERS5 55 aa6.06□□□□□ -1.44
NSMCE1-214ENST00000569236 UQCR11O14957 56 aa6.05□□□□□ -1.44
NSMCE1-214ENST00000569236 MT2AP02795 61 aa6.03□□□□□ -1.44
NSMCE1-214ENST00000569236 MIR22HGQ0VDD5 57 aa6.01□□□□□ -1.45
NSMCE1-214ENST00000569236 SPATA8Q6RVD6 105 aa6.01□□□□□ -1.45
NSMCE1-214ENST00000569236 P0C880 135 aa6□□□□□ -1.45
NSMCE1-214ENST00000569236 KRTAP9-6A0A140TA67 174 aa5.99□□□□□ -1.45
NSMCE1-214ENST00000569236 MT1FP04733 61 aa5.99□□□□□ -1.45
NSMCE1-214ENST00000569236 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
NSMCE1-214ENST00000569236 CSAG1Q6PB30 78 aa5.98□□□□□ -1.45
NSMCE1-214ENST00000569236 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
NSMCE1-214ENST00000569236 A0A1B0GU33 70 aa5.95□□□□□ -1.46
NSMCE1-214ENST00000569236 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
NSMCE1-214ENST00000569236 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
NSMCE1-214ENST00000569236 H0YAA0 97 aa5.91□□□□□ -1.46
NSMCE1-214ENST00000569236 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
NSMCE1-214ENST00000569236 USH2AO75445 5202 aa5.87□□□□□ -1.47
NSMCE1-214ENST00000569236 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
NSMCE1-214ENST00000569236 SSPOA2VEC9 5147 aa5.78□□□□□ -1.48
NSMCE1-214ENST00000569236 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
NSMCE1-214ENST00000569236 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
NSMCE1-214ENST00000569236 M0QZ58 72 aa5.7□□□□□ -1.5
NSMCE1-214ENST00000569236 LOC100996750A0A140TA64 210 aa5.69□□□□□ -1.5
NSMCE1-214ENST00000569236 KRTAP4-6Q9BYQ5 205 aa5.69□□□□□ -1.5
NSMCE1-214ENST00000569236 KRTAP19-1Q8IUB9 90 aa5.67□□□□□ -1.5
NSMCE1-214ENST00000569236 A0A0D9SG42 100 aa5.65□□□□□ -1.51
NSMCE1-214ENST00000569236 SPRR2GQ9BYE4 73 aa5.63□□□□□ -1.51
NSMCE1-214ENST00000569236 CRIPTQ9P021 101 aa5.62□□□□□ -1.51
NSMCE1-214ENST00000569236 KRTAP19-6Q3LI70 58 aa5.61□□□□□ -1.51
NSMCE1-214ENST00000569236 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
NSMCE1-214ENST00000569236 FCGBPQ9Y6R7 5405 aaPredicted RBP5.6□□□□□ -1.51
NSMCE1-214ENST00000569236 R4GN34 69 aa5.6□□□□□ -1.51
NSMCE1-214ENST00000569236 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
NSMCE1-214ENST00000569236 KRTAP12-2P59991 146 aa5.56□□□□□ -1.52
NSMCE1-214ENST00000569236 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
NSMCE1-214ENST00000569236 MT1BP07438 61 aa5.54□□□□□ -1.52
NSMCE1-214ENST00000569236 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
NSMCE1-214ENST00000569236 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
NSMCE1-214ENST00000569236 MACF1Q9UPN3 7388 aaKnown RBP5.46□□□□□ -1.53
NSMCE1-214ENST00000569236 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
NSMCE1-214ENST00000569236 SYNE2Q8WXH0 6885 aaKnown RBP5.38□□□□□ -1.55
NSMCE1-214ENST00000569236 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
NSMCE1-214ENST00000569236 PLAC4Q8WY50 150 aa5.35□□□□□ -1.55
NSMCE1-214ENST00000569236 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
NSMCE1-214ENST00000569236 C10orf95Q9H7T3 257 aa5.25□□□□□ -1.57
NSMCE1-214ENST00000569236 MT1XP80297 61 aa5.24□□□□□ -1.57
NSMCE1-214ENST00000569236 KRTAP6-3Q3LI67 103 aa5.22□□□□□ -1.57
NSMCE1-214ENST00000569236 KRTAP4-8Q9BYQ9 185 aa5.22□□□□□ -1.57
NSMCE1-214ENST00000569236 KMT2DO14686 5537 aa5.07□□□□□ -1.6
NSMCE1-214ENST00000569236 TNP1P09430 55 aa5.05□□□□□ -1.6
NSMCE1-214ENST00000569236 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
NSMCE1-214ENST00000569236 MUC12Q9UKN1 5478 aa5.04□□□□□ -1.6
NSMCE1-214ENST00000569236 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
NSMCE1-214ENST00000569236 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
NSMCE1-214ENST00000569236 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
NSMCE1-214ENST00000569236 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
NSMCE1-214ENST00000569236 NEBP20929 6669 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms