RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 SPRR2GQ9BYE4 73 aa9.06□□□□□ -0.96
ABCA3-206ENST00000569062 ATOX1O00244 68 aa9.04□□□□□ -0.96
ABCA3-206ENST00000569062 MT1BP07438 61 aa9.04□□□□□ -0.96
ABCA3-206ENST00000569062 KLKP1Q107X0 134 aa9.03□□□□□ -0.96
ABCA3-206ENST00000569062 KRTAP19-8Q3LI54 63 aa9.01□□□□□ -0.97
ABCA3-206ENST00000569062 Q5VV11 94 aa9□□□□□ -0.97
ABCA3-206ENST00000569062 LINC00208Q96KT6 92 aa8.95□□□□□ -0.98
ABCA3-206ENST00000569062 OCR1Q9BZK8 76 aa8.93□□□□□ -0.98
ABCA3-206ENST00000569062 A6NN06 94 aa8.91□□□□□ -0.98
ABCA3-206ENST00000569062 NDUFC1O43677 76 aa8.91□□□□□ -0.98
ABCA3-206ENST00000569062 IMUPQ9GZP8 106 aa8.89□□□□□ -0.99
ABCA3-206ENST00000569062 A8MUN3 132 aa8.87□□□□□ -0.99
ABCA3-206ENST00000569062 KRTAP6-3Q3LI67 103 aa8.87□□□□□ -0.99
ABCA3-206ENST00000569062 CRIPTQ9P021 101 aa8.87□□□□□ -0.99
ABCA3-206ENST00000569062 MP68P56378 58 aa8.86□□□□□ -0.99
ABCA3-206ENST00000569062 H0YAA0 97 aa8.83□□□□□ -1
ABCA3-206ENST00000569062 KRTAP10-5P60370 271 aa8.82□□□□□ -1
ABCA3-206ENST00000569062 J3QR89 54 aa8.8□□□□□ -1
ABCA3-206ENST00000569062 ADM2Q7Z4H4 148 aa8.77□□□□□ -1.01
ABCA3-206ENST00000569062 H3BPC8 53 aa8.73□□□□□ -1.01
ABCA3-206ENST00000569062 SCGB1A1P11684 91 aa8.71□□□□□ -1.02
ABCA3-206ENST00000569062 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
ABCA3-206ENST00000569062 P0C880 135 aa8.58□□□□□ -1.04
ABCA3-206ENST00000569062 K7ERU9 68 aa8.57□□□□□ -1.04
ABCA3-206ENST00000569062 MT-ATP8P03928 68 aa8.56□□□□□ -1.04
ABCA3-206ENST00000569062 MUC12Q9UKN1 5478 aa8.56□□□□□ -1.04
ABCA3-206ENST00000569062 R4GN34 69 aa8.53□□□□□ -1.04
ABCA3-206ENST00000569062 C20orf197Q8N268 126 aa8.5□□□□□ -1.05
ABCA3-206ENST00000569062 NEBP20929 6669 aa8.5□□□□□ -1.05
ABCA3-206ENST00000569062 KRTAP5-9P26371 169 aa8.48□□□□□ -1.05
ABCA3-206ENST00000569062 PLAC4Q8WY50 150 aa8.48□□□□□ -1.05
ABCA3-206ENST00000569062 TRAV7A0A075B6U4 112 aa8.47□□□□□ -1.05
ABCA3-206ENST00000569062 M0QZ58 72 aa8.47□□□□□ -1.05
ABCA3-206ENST00000569062 MT1XP80297 61 aa8.47□□□□□ -1.05
ABCA3-206ENST00000569062 SMIM20Q8N5G0 67 aa8.44□□□□□ -1.06
ABCA3-206ENST00000569062 PRO2289Q9P1D8 64 aa8.44□□□□□ -1.06
ABCA3-206ENST00000569062 ACYP2P14621 99 aa8.43□□□□□ -1.06
ABCA3-206ENST00000569062 KMT2DO14686 5537 aa8.4□□□□□ -1.06
ABCA3-206ENST00000569062 LINC01554Q52M75 96 aa8.36□□□□□ -1.07
ABCA3-206ENST00000569062 SNURFQ9Y675 71 aa8.34□□□□□ -1.07
ABCA3-206ENST00000569062 KRTAP20-1Q3LI63 56 aa8.33□□□□□ -1.08
ABCA3-206ENST00000569062 MDN1Q9NU22 5596 aa8.32□□□□□ -1.08
ABCA3-206ENST00000569062 SPTSSBQ8NFR3 76 aa8.3□□□□□ -1.08
ABCA3-206ENST00000569062 CHKB-CPT1BH3BT56 60 aa8.27□□□□□ -1.09
ABCA3-206ENST00000569062 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
ABCA3-206ENST00000569062 SPRR2FQ96RM1 72 aa8.24□□□□□ -1.09
ABCA3-206ENST00000569062 KRTAP8-1Q8IUC2 63 aa8.2□□□□□ -1.1
ABCA3-206ENST00000569062 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
ABCA3-206ENST00000569062 SERP2Q8N6R1 65 aa8.17□□□□□ -1.1
ABCA3-206ENST00000569062 KRTAP4-8A0A0G2JLE6 195 aa8.14□□□□□ -1.11
ABCA3-206ENST00000569062 KRTAP4-8Q9BYQ9 185 aa8.14□□□□□ -1.11
ABCA3-206ENST00000569062 SPRR2EP22531 72 aa8.11□□□□□ -1.11
ABCA3-206ENST00000569062 SPRR2BP35325 72 aa8.11□□□□□ -1.11
ABCA3-206ENST00000569062 SPRR2AP35326 72 aa8.11□□□□□ -1.11
ABCA3-206ENST00000569062 KRTAP10-7P60409 375 aaPredicted RBP8.1□□□□□ -1.11
ABCA3-206ENST00000569062 KRTAP10-12P60413 245 aa8.04□□□□□ -1.12
ABCA3-206ENST00000569062 KRTAP13-4Q3LI77 160 aa8.03□□□□□ -1.12
ABCA3-206ENST00000569062 LCE1AQ5T7P2 110 aa8.01□□□□□ -1.13
ABCA3-206ENST00000569062 KRTAP2-3P0C7H8 128 aa8□□□□□ -1.13
ABCA3-206ENST00000569062 KRTAP2-4Q9BYR9 128 aa8□□□□□ -1.13
ABCA3-206ENST00000569062 COA5Q86WW8 74 aa7.98□□□□□ -1.13
ABCA3-206ENST00000569062 COX7CP15954 63 aa7.92□□□□□ -1.14
ABCA3-206ENST00000569062 CYSTM1Q9H1C7 97 aa7.86□□□□□ -1.15
ABCA3-206ENST00000569062 SPRR2DP22532 72 aa7.84□□□□□ -1.15
ABCA3-206ENST00000569062 CAMK2N1Q7Z7J9 78 aa7.84□□□□□ -1.15
ABCA3-206ENST00000569062 H7BZZ5 65 aa7.82□□□□□ -1.16
ABCA3-206ENST00000569062 SEC61GP60059 68 aa7.81□□□□□ -1.16
ABCA3-206ENST00000569062 ANAPC13Q9BS18 74 aa7.81□□□□□ -1.16
ABCA3-206ENST00000569062 SERP1Q9Y6X1 66 aa7.81□□□□□ -1.16
ABCA3-206ENST00000569062 A0A0D9SG42 100 aa7.77□□□□□ -1.17
ABCA3-206ENST00000569062 SPATA8Q6RVD6 105 aa7.76□□□□□ -1.17
ABCA3-206ENST00000569062 KRTAP2-2Q9BYT5 123 aa7.75□□□□□ -1.17
ABCA3-206ENST00000569062 KRTAP2-1Q9BYU5 128 aa7.75□□□□□ -1.17
ABCA3-206ENST00000569062 A0A1B0GU33 70 aa7.71□□□□□ -1.18
ABCA3-206ENST00000569062 PCP4P48539 62 aa7.68□□□□□ -1.18
ABCA3-206ENST00000569062 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
ABCA3-206ENST00000569062 LCE3BQ5TA77 95 aa7.63□□□□□ -1.19
ABCA3-206ENST00000569062 KRTAP12-1P59990 96 aa7.61□□□□□ -1.19
ABCA3-206ENST00000569062 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
ABCA3-206ENST00000569062 KRTAP19-7Q3SYF9 63 aa7.58□□□□□ -1.2
ABCA3-206ENST00000569062 A0A1B0GU69 56 aa7.56□□□□□ -1.2
ABCA3-206ENST00000569062 MT1EP04732 61 aa7.5□□□□□ -1.21
ABCA3-206ENST00000569062 A8MU10 97 aa7.48□□□□□ -1.21
ABCA3-206ENST00000569062 SMIM26A0A096LP01 95 aa7.47□□□□□ -1.21
ABCA3-206ENST00000569062 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.22
ABCA3-206ENST00000569062 LOC100996750A0A140TA64 210 aa7.45□□□□□ -1.22
ABCA3-206ENST00000569062 KRTAP4-6Q9BYQ5 205 aa7.45□□□□□ -1.22
ABCA3-206ENST00000569062 TMEM258P61165 79 aa7.43□□□□□ -1.22
ABCA3-206ENST00000569062 KRTAP19-3Q7Z4W3 81 aa7.43□□□□□ -1.22
ABCA3-206ENST00000569062 ATP5EP56381 51 aaPredicted RBP7.41□□□□□ -1.22
ABCA3-206ENST00000569062 KRTAP19-5Q3LI72 72 aa7.39□□□□□ -1.23
ABCA3-206ENST00000569062 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
ABCA3-206ENST00000569062 GPR98Q8WXG9 6306 aa7.36□□□□□ -1.23
ABCA3-206ENST00000569062 PRR15LQ9BU68 103 aa7.3□□□□□ -1.24
ABCA3-206ENST00000569062 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
ABCA3-206ENST00000569062 LINC01558Q9Y6Z2 57 aa7.26□□□□□ -1.25
ABCA3-206ENST00000569062 MT1GP13640 62 aa7.25□□□□□ -1.25
ABCA3-206ENST00000569062 LCE3AQ5TA76 89 aa7.23□□□□□ -1.25
ABCA3-206ENST00000569062 TNP1P09430 55 aa7.22□□□□□ -1.25
ABCA3-206ENST00000569062 MT1LQ93083 61 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms