RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 LCA10Q71F78 164 aa4.25□□□□□ -1.73
RPAP1-211ENST00000568413 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.24□□□□□ -1.73
RPAP1-211ENST00000568413 MT2AP02795 61 aa4.23□□□□□ -1.73
RPAP1-211ENST00000568413 KRTAP9-7A8MTY7 169 aa4.22□□□□□ -1.73
RPAP1-211ENST00000568413 KRTAP10-10P60014 251 aa4.22□□□□□ -1.73
RPAP1-211ENST00000568413 C20orf197Q8N268 126 aa4.22□□□□□ -1.73
RPAP1-211ENST00000568413 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
RPAP1-211ENST00000568413 NDUFC1O43677 76 aa4.2□□□□□ -1.74
RPAP1-211ENST00000568413 COX7CP15954 63 aa4.2□□□□□ -1.74
RPAP1-211ENST00000568413 DMAC1Q96GE9 116 aa4.2□□□□□ -1.74
RPAP1-211ENST00000568413 KRTAP3-3Q9BYR6 98 aa4.2□□□□□ -1.74
RPAP1-211ENST00000568413 MT1FP04733 61 aa4.19□□□□□ -1.74
RPAP1-211ENST00000568413 FCGBPQ9Y6R7 5405 aaPredicted RBP4.18□□□□□ -1.74
RPAP1-211ENST00000568413 LCE2BO14633 110 aa4.17□□□□□ -1.74
RPAP1-211ENST00000568413 ACYP2P14621 99 aa4.17□□□□□ -1.74
RPAP1-211ENST00000568413 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
RPAP1-211ENST00000568413 ANAPC13Q9BS18 74 aa4.16□□□□□ -1.74
RPAP1-211ENST00000568413 KRTAP19-1Q8IUB9 90 aa4.15□□□□□ -1.75
RPAP1-211ENST00000568413 KRTAP9-3Q9BYQ3 159 aa4.14□□□□□ -1.75
RPAP1-211ENST00000568413 H0YAA0 97 aa4.1□□□□□ -1.75
RPAP1-211ENST00000568413 SPTSSBQ8NFR3 76 aa4.1□□□□□ -1.75
RPAP1-211ENST00000568413 CHKB-CPT1BH3BT56 60 aa4.08□□□□□ -1.76
RPAP1-211ENST00000568413 H7BZZ5 65 aa4.08□□□□□ -1.76
RPAP1-211ENST00000568413 CYSTM1Q9H1C7 97 aa4.06□□□□□ -1.76
RPAP1-211ENST00000568413 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
RPAP1-211ENST00000568413 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
RPAP1-211ENST00000568413 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
RPAP1-211ENST00000568413 COA5Q86WW8 74 aa4.02□□□□□ -1.77
RPAP1-211ENST00000568413 SPRR2GQ9BYE4 73 aa4.01□□□□□ -1.77
RPAP1-211ENST00000568413 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
RPAP1-211ENST00000568413 KRTAP3-2Q9BYR7 98 aa3.98□□□□□ -1.77
RPAP1-211ENST00000568413 MACF1Q9UPN3 7388 aaKnown RBP3.98□□□□□ -1.77
RPAP1-211ENST00000568413 P0C880 135 aa3.97□□□□□ -1.77
RPAP1-211ENST00000568413 ATP5EP56381 51 aaPredicted RBP3.97□□□□□ -1.77
RPAP1-211ENST00000568413 KRTAP19-8Q3LI54 63 aa3.95□□□□□ -1.78
RPAP1-211ENST00000568413 Q5VV11 94 aa3.95□□□□□ -1.78
RPAP1-211ENST00000568413 R4GN34 69 aa3.95□□□□□ -1.78
RPAP1-211ENST00000568413 TMEM258P61165 79 aa3.93□□□□□ -1.78
RPAP1-211ENST00000568413 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
RPAP1-211ENST00000568413 M0QZ58 72 aa3.91□□□□□ -1.78
RPAP1-211ENST00000568413 SEC61GP60059 68 aa3.91□□□□□ -1.78
RPAP1-211ENST00000568413 MT1BP07438 61 aa3.9□□□□□ -1.79
RPAP1-211ENST00000568413 SERP1Q9Y6X1 66 aa3.89□□□□□ -1.79
RPAP1-211ENST00000568413 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
RPAP1-211ENST00000568413 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
RPAP1-211ENST00000568413 LINC01554Q52M75 96 aa3.84□□□□□ -1.79
RPAP1-211ENST00000568413 A0A1B0GU69 56 aa3.82□□□□□ -1.8
RPAP1-211ENST00000568413 PCP4P48539 62 aa3.82□□□□□ -1.8
RPAP1-211ENST00000568413 A6NN06 94 aa3.81□□□□□ -1.8
RPAP1-211ENST00000568413 A0A1B0GU33 70 aa3.8□□□□□ -1.8
RPAP1-211ENST00000568413 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
RPAP1-211ENST00000568413 KRTAP10-5P60370 271 aa3.79□□□□□ -1.8
RPAP1-211ENST00000568413 PRR15LQ9BU68 103 aa3.79□□□□□ -1.8
RPAP1-211ENST00000568413 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
RPAP1-211ENST00000568413 LINC01558Q9Y6Z2 57 aa3.78□□□□□ -1.8
RPAP1-211ENST00000568413 PRO2289Q9P1D8 64 aa3.76□□□□□ -1.81
RPAP1-211ENST00000568413 SPATA8Q6RVD6 105 aa3.74□□□□□ -1.81
RPAP1-211ENST00000568413 NEBP20929 6669 aa3.73□□□□□ -1.81
RPAP1-211ENST00000568413 SMIM26A0A096LP01 95 aa3.71□□□□□ -1.82
RPAP1-211ENST00000568413 MT1XP80297 61 aa3.71□□□□□ -1.82
RPAP1-211ENST00000568413 V9GYY9 64 aa3.71□□□□□ -1.82
RPAP1-211ENST00000568413 A0A0D9SG42 100 aa3.7□□□□□ -1.82
RPAP1-211ENST00000568413 RPS28P62857 69 aaKnown RBP3.68□□□□□ -1.82
RPAP1-211ENST00000568413 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
RPAP1-211ENST00000568413 Q1T7F1 81 aa3.67□□□□□ -1.82
RPAP1-211ENST00000568413 UQCR11O14957 56 aa3.66□□□□□ -1.82
RPAP1-211ENST00000568413 SPINT4Q6UDR6 99 aa3.66□□□□□ -1.82
RPAP1-211ENST00000568413 CAMK2N1Q7Z7J9 78 aa3.66□□□□□ -1.82
RPAP1-211ENST00000568413 KMT2DO14686 5537 aa3.65□□□□□ -1.82
RPAP1-211ENST00000568413 MDN1Q9NU22 5596 aa3.65□□□□□ -1.83
RPAP1-211ENST00000568413 KRTAP5-9P26371 169 aa3.64□□□□□ -1.83
RPAP1-211ENST00000568413 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
RPAP1-211ENST00000568413 A8MU10 97 aa3.63□□□□□ -1.83
RPAP1-211ENST00000568413 PSPHP1O15172 72 aa3.61□□□□□ -1.83
RPAP1-211ENST00000568413 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
RPAP1-211ENST00000568413 MIR22HGQ0VDD5 57 aa3.58□□□□□ -1.84
RPAP1-211ENST00000568413 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
RPAP1-211ENST00000568413 KRTAP10-7P60409 375 aaPredicted RBP3.54□□□□□ -1.84
RPAP1-211ENST00000568413 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
RPAP1-211ENST00000568413 SPRR2EP22531 72 aa3.53□□□□□ -1.84
RPAP1-211ENST00000568413 SPRR2BP35325 72 aa3.53□□□□□ -1.84
RPAP1-211ENST00000568413 SPRR2AP35326 72 aa3.53□□□□□ -1.84
RPAP1-211ENST00000568413 A6NED7 52 aa3.52□□□□□ -1.85
RPAP1-211ENST00000568413 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
RPAP1-211ENST00000568413 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
RPAP1-211ENST00000568413 K7ERS5 55 aa3.51□□□□□ -1.85
RPAP1-211ENST00000568413 KRTAP8-1Q8IUC2 63 aa3.5□□□□□ -1.85
RPAP1-211ENST00000568413 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
RPAP1-211ENST00000568413 KRTAP4-8Q9BYQ9 185 aa3.48□□□□□ -1.85
RPAP1-211ENST00000568413 C10orf95Q9H7T3 257 aa3.46□□□□□ -1.86
RPAP1-211ENST00000568413 LCE1AQ5T7P2 110 aa3.45□□□□□ -1.86
RPAP1-211ENST00000568413 TNP1P09430 55 aa3.44□□□□□ -1.86
RPAP1-211ENST00000568413 SPRR2DP22532 72 aa3.4□□□□□ -1.87
RPAP1-211ENST00000568413 KRTAP2-2Q9BYT5 123 aa3.4□□□□□ -1.87
RPAP1-211ENST00000568413 KRTAP2-1Q9BYU5 128 aa3.4□□□□□ -1.87
RPAP1-211ENST00000568413 CDC42SE1Q9NRR8 79 aa3.4□□□□□ -1.87
RPAP1-211ENST00000568413 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
RPAP1-211ENST00000568413 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
RPAP1-211ENST00000568413 KRTAP19-7Q3SYF9 63 aa3.31□□□□□ -1.88
RPAP1-211ENST00000568413 LCE3AQ5TA76 89 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms