RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 KRTAP4-1Q9BYQ7 146 aa4.55□□□□□ -1.68
KLHDC4-220ENST00000568338 LOC101927531A0A1B0GV80 90 aa4.53□□□□□ -1.68
KLHDC4-220ENST00000568338 LINC00208Q96KT6 92 aa4.53□□□□□ -1.68
KLHDC4-220ENST00000568338 MT1HP80294 61 aa4.52□□□□□ -1.69
KLHDC4-220ENST00000568338 PCOTHQ58A44 107 aa4.52□□□□□ -1.69
KLHDC4-220ENST00000568338 C20orf197Q8N268 126 aa4.52□□□□□ -1.69
KLHDC4-220ENST00000568338 C1orf64Q8NEQ6 169 aa4.52□□□□□ -1.69
KLHDC4-220ENST00000568338 IGKV2-30P06310 120 aa4.51□□□□□ -1.69
KLHDC4-220ENST00000568338 C7orf65Q6ZTY9 151 aa4.51□□□□□ -1.69
KLHDC4-220ENST00000568338 IGKV2D-30A0A075B6S6 120 aa4.5□□□□□ -1.69
KLHDC4-220ENST00000568338 KLKP1Q107X0 134 aa4.5□□□□□ -1.69
KLHDC4-220ENST00000568338 CCDC179H3BU77 68 aa4.49□□□□□ -1.69
KLHDC4-220ENST00000568338 PCP4P48539 62 aa4.49□□□□□ -1.69
KLHDC4-220ENST00000568338 KRTAP10-6P60371 365 aaPredicted RBP4.49□□□□□ -1.69
KLHDC4-220ENST00000568338 SNURFQ9Y675 71 aa4.49□□□□□ -1.69
KLHDC4-220ENST00000568338 M0R2T5 61 aa4.48□□□□□ -1.69
KLHDC4-220ENST00000568338 SPINK7P58062 85 aa4.47□□□□□ -1.69
KLHDC4-220ENST00000568338 CYP4F30PQ9H0H9 118 aa4.47□□□□□ -1.69
KLHDC4-220ENST00000568338 NDUFC1O43677 76 aa4.45□□□□□ -1.7
KLHDC4-220ENST00000568338 KRTAP19-2Q3LHN2 52 aa4.43□□□□□ -1.7
KLHDC4-220ENST00000568338 CYSTM1Q9H1C7 97 aa4.42□□□□□ -1.7
KLHDC4-220ENST00000568338 H7BZZ5 65 aa4.41□□□□□ -1.7
KLHDC4-220ENST00000568338 HRES1P13985 223 aa4.4□□□□□ -1.71
KLHDC4-220ENST00000568338 SPANXA2-OT1Q8N9U9 137 aa4.38□□□□□ -1.71
KLHDC4-220ENST00000568338 FCGBPQ9Y6R7 5405 aaPredicted RBP4.37□□□□□ -1.71
KLHDC4-220ENST00000568338 SSPOA2VEC9 5147 aa4.37□□□□□ -1.71
KLHDC4-220ENST00000568338 C4orf26Q17RF5 130 aa4.37□□□□□ -1.71
KLHDC4-220ENST00000568338 COX6B2Q6YFQ2 88 aa4.37□□□□□ -1.71
KLHDC4-220ENST00000568338 RBM12B-AS1Q9P1G2 102 aa4.37□□□□□ -1.71
KLHDC4-220ENST00000568338 TMEM258P61165 79 aa4.36□□□□□ -1.71
KLHDC4-220ENST00000568338 ATP5EP56381 51 aaPredicted RBP4.35□□□□□ -1.71
KLHDC4-220ENST00000568338 MPLKIPQ8TAP9 179 aa4.35□□□□□ -1.71
KLHDC4-220ENST00000568338 FAM236DA0A1B0GTK5 79 aa4.34□□□□□ -1.71
KLHDC4-220ENST00000568338 A8MUN3 132 aa4.34□□□□□ -1.71
KLHDC4-220ENST00000568338 FAM236CP0DP71 79 aa4.34□□□□□ -1.71
KLHDC4-220ENST00000568338 USH2AO75445 5202 aa4.34□□□□□ -1.71
KLHDC4-220ENST00000568338 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
KLHDC4-220ENST00000568338 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
KLHDC4-220ENST00000568338 ACYP2P14621 99 aa4.3□□□□□ -1.72
KLHDC4-220ENST00000568338 H1FX-AS1Q4G0G2 97 aa4.28□□□□□ -1.72
KLHDC4-220ENST00000568338 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
KLHDC4-220ENST00000568338 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
KLHDC4-220ENST00000568338 CHKB-CPT1BH3BT56 60 aa4.24□□□□□ -1.73
KLHDC4-220ENST00000568338 COA5Q86WW8 74 aa4.24□□□□□ -1.73
KLHDC4-220ENST00000568338 S4R3F8 94 aa4.23□□□□□ -1.73
KLHDC4-220ENST00000568338 SERP1Q9Y6X1 66 aa4.22□□□□□ -1.73
KLHDC4-220ENST00000568338 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
KLHDC4-220ENST00000568338 LCA10Q71F78 164 aa4.2□□□□□ -1.74
KLHDC4-220ENST00000568338 SPTSSBQ8NFR3 76 aa4.19□□□□□ -1.74
KLHDC4-220ENST00000568338 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
KLHDC4-220ENST00000568338 RPS28P62857 69 aaKnown RBP4.15□□□□□ -1.75
KLHDC4-220ENST00000568338 CSAG1Q6PB30 78 aa4.14□□□□□ -1.75
KLHDC4-220ENST00000568338 NEBP20929 6669 aa4.1□□□□□ -1.75
KLHDC4-220ENST00000568338 MT2AP02795 61 aa4.1□□□□□ -1.75
KLHDC4-220ENST00000568338 SMIM26A0A096LP01 95 aa4.09□□□□□ -1.75
KLHDC4-220ENST00000568338 KRTAP19-6Q3LI70 58 aa4.09□□□□□ -1.75
KLHDC4-220ENST00000568338 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
KLHDC4-220ENST00000568338 KRTAP20-1Q3LI63 56 aa4.08□□□□□ -1.76
KLHDC4-220ENST00000568338 MT1FP04733 61 aa4.07□□□□□ -1.76
KLHDC4-220ENST00000568338 H0YAA0 97 aa4.06□□□□□ -1.76
KLHDC4-220ENST00000568338 SEC61GP60059 68 aa4.05□□□□□ -1.76
KLHDC4-220ENST00000568338 V9GYY9 64 aa4.05□□□□□ -1.76
KLHDC4-220ENST00000568338 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
KLHDC4-220ENST00000568338 Q1T7F1 81 aa4.03□□□□□ -1.76
KLHDC4-220ENST00000568338 A0A1B0GU69 56 aa4.02□□□□□ -1.77
KLHDC4-220ENST00000568338 ADM2Q7Z4H4 148 aa4.02□□□□□ -1.77
KLHDC4-220ENST00000568338 PRR15LQ9BU68 103 aa4.02□□□□□ -1.77
KLHDC4-220ENST00000568338 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
KLHDC4-220ENST00000568338 MUC12Q9UKN1 5478 aa3.98□□□□□ -1.77
KLHDC4-220ENST00000568338 PSPHP1O15172 72 aa3.96□□□□□ -1.78
KLHDC4-220ENST00000568338 P0C880 135 aa3.96□□□□□ -1.78
KLHDC4-220ENST00000568338 A0A1B0GU33 70 aa3.92□□□□□ -1.78
KLHDC4-220ENST00000568338 Q5VV11 94 aa3.92□□□□□ -1.78
KLHDC4-220ENST00000568338 CRIPTQ9P021 101 aa3.92□□□□□ -1.78
KLHDC4-220ENST00000568338 R4GN34 69 aa3.9□□□□□ -1.79
KLHDC4-220ENST00000568338 M0QZ58 72 aa3.89□□□□□ -1.79
KLHDC4-220ENST00000568338 UQCR11O14957 56 aa3.88□□□□□ -1.79
KLHDC4-220ENST00000568338 KMT2DO14686 5537 aa3.87□□□□□ -1.79
KLHDC4-220ENST00000568338 A6NED7 52 aa3.85□□□□□ -1.79
KLHDC4-220ENST00000568338 KRTAP2-3P0C7H8 128 aa3.85□□□□□ -1.79
KLHDC4-220ENST00000568338 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
KLHDC4-220ENST00000568338 KRTAP2-4Q9BYR9 128 aa3.85□□□□□ -1.79
KLHDC4-220ENST00000568338 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.79
KLHDC4-220ENST00000568338 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
KLHDC4-220ENST00000568338 KRTAP10-7P60409 375 aaPredicted RBP3.83□□□□□ -1.8
KLHDC4-220ENST00000568338 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
KLHDC4-220ENST00000568338 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
KLHDC4-220ENST00000568338 LINC01554Q52M75 96 aa3.8□□□□□ -1.8
KLHDC4-220ENST00000568338 A6NN06 94 aa3.79□□□□□ -1.8
KLHDC4-220ENST00000568338 A0A0D9SG42 100 aa3.78□□□□□ -1.8
KLHDC4-220ENST00000568338 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
KLHDC4-220ENST00000568338 A8MU10 97 aa3.77□□□□□ -1.81
KLHDC4-220ENST00000568338 CDC42SE1Q9NRR8 79 aa3.77□□□□□ -1.81
KLHDC4-220ENST00000568338 KRTAP5-11Q6L8G4 156 aa3.76□□□□□ -1.81
KLHDC4-220ENST00000568338 KRTAP19-8Q3LI54 63 aa3.75□□□□□ -1.81
KLHDC4-220ENST00000568338 MT3P25713 68 aa3.73□□□□□ -1.81
KLHDC4-220ENST00000568338 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
KLHDC4-220ENST00000568338 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
KLHDC4-220ENST00000568338 KRTAP12-1P59990 96 aa3.71□□□□□ -1.82
KLHDC4-220ENST00000568338 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms