RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 A8MUN3 132 aa3.69□□□□□ -1.82
HDGFL3-205ENST00000568129 MACF1Q9UPN3 7388 aaKnown RBP3.69□□□□□ -1.82
HDGFL3-205ENST00000568129 H0YAA0 97 aa3.68□□□□□ -1.82
HDGFL3-205ENST00000568129 J3QR89 54 aa3.68□□□□□ -1.82
HDGFL3-205ENST00000568129 MT1BP07438 61 aa3.68□□□□□ -1.82
HDGFL3-205ENST00000568129 KLKP1Q107X0 134 aa3.68□□□□□ -1.82
HDGFL3-205ENST00000568129 FAM236AA0A1B0GUQ0 79 aa3.66□□□□□ -1.82
HDGFL3-205ENST00000568129 FAM236BA0A1B0GV22 79 aa3.66□□□□□ -1.82
HDGFL3-205ENST00000568129 H3BPC8 53 aa3.66□□□□□ -1.82
HDGFL3-205ENST00000568129 LINC00208Q96KT6 92 aa3.66□□□□□ -1.82
HDGFL3-205ENST00000568129 CRIPTQ9P021 101 aa3.66□□□□□ -1.82
HDGFL3-205ENST00000568129 MP68P56378 58 aa3.65□□□□□ -1.83
HDGFL3-205ENST00000568129 IMUPQ9GZP8 106 aa3.65□□□□□ -1.83
HDGFL3-205ENST00000568129 NDUFC1O43677 76 aa3.63□□□□□ -1.83
HDGFL3-205ENST00000568129 Q5VV11 94 aa3.62□□□□□ -1.83
HDGFL3-205ENST00000568129 SYNE2Q8WXH0 6885 aaKnown RBP3.6□□□□□ -1.83
HDGFL3-205ENST00000568129 KRTAP10-5P60370 271 aa3.59□□□□□ -1.83
HDGFL3-205ENST00000568129 DMAC1Q96GE9 116 aa3.59□□□□□ -1.83
HDGFL3-205ENST00000568129 KRTAP6-3Q3LI67 103 aa3.58□□□□□ -1.84
HDGFL3-205ENST00000568129 SCGB1A1P11684 91 aa3.57□□□□□ -1.84
HDGFL3-205ENST00000568129 A6NN06 94 aa3.56□□□□□ -1.84
HDGFL3-205ENST00000568129 K7ERU9 68 aa3.56□□□□□ -1.84
HDGFL3-205ENST00000568129 MT-ATP8P03928 68 aa3.56□□□□□ -1.84
HDGFL3-205ENST00000568129 ADM2Q7Z4H4 148 aa3.55□□□□□ -1.84
HDGFL3-205ENST00000568129 SMIM20Q8N5G0 67 aa3.55□□□□□ -1.84
HDGFL3-205ENST00000568129 TRAV7A0A075B6U4 112 aa3.54□□□□□ -1.84
HDGFL3-205ENST00000568129 P0C880 135 aa3.5□□□□□ -1.85
HDGFL3-205ENST00000568129 ACYP2P14621 99 aa3.49□□□□□ -1.85
HDGFL3-205ENST00000568129 C20orf197Q8N268 126 aa3.48□□□□□ -1.85
HDGFL3-205ENST00000568129 KRTAP5-9P26371 169 aa3.46□□□□□ -1.86
HDGFL3-205ENST00000568129 MT1XP80297 61 aa3.46□□□□□ -1.86
HDGFL3-205ENST00000568129 SPANXA2-OT1Q8N9U9 137 aa3.45□□□□□ -1.86
HDGFL3-205ENST00000568129 R4GN34 69 aa3.45□□□□□ -1.86
HDGFL3-205ENST00000568129 MUC12Q9UKN1 5478 aa3.44□□□□□ -1.86
HDGFL3-205ENST00000568129 SERP2Q8N6R1 65 aa3.43□□□□□ -1.86
HDGFL3-205ENST00000568129 PLAC4Q8WY50 150 aa3.42□□□□□ -1.86
HDGFL3-205ENST00000568129 PRO2289Q9P1D8 64 aa3.42□□□□□ -1.86
HDGFL3-205ENST00000568129 NEBP20929 6669 aa3.42□□□□□ -1.86
HDGFL3-205ENST00000568129 M0QZ58 72 aa3.41□□□□□ -1.86
HDGFL3-205ENST00000568129 SPTSSBQ8NFR3 76 aa3.41□□□□□ -1.86
HDGFL3-205ENST00000568129 SNURFQ9Y675 71 aa3.41□□□□□ -1.86
HDGFL3-205ENST00000568129 KRTAP12-2P59991 146 aa3.4□□□□□ -1.87
HDGFL3-205ENST00000568129 KMT2DO14686 5537 aa3.39□□□□□ -1.87
HDGFL3-205ENST00000568129 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
HDGFL3-205ENST00000568129 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
HDGFL3-205ENST00000568129 CHKB-CPT1BH3BT56 60 aa3.35□□□□□ -1.87
HDGFL3-205ENST00000568129 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
HDGFL3-205ENST00000568129 COX7CP15954 63 aa3.33□□□□□ -1.88
HDGFL3-205ENST00000568129 LINC01554Q52M75 96 aa3.31□□□□□ -1.88
HDGFL3-205ENST00000568129 KRTAP10-12P60413 245 aa3.3□□□□□ -1.88
HDGFL3-205ENST00000568129 H7BZZ5 65 aa3.29□□□□□ -1.88
HDGFL3-205ENST00000568129 KRTAP13-4Q3LI77 160 aa3.29□□□□□ -1.88
HDGFL3-205ENST00000568129 COA5Q86WW8 74 aa3.29□□□□□ -1.88
HDGFL3-205ENST00000568129 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
HDGFL3-205ENST00000568129 KRTAP4-8A0A0G2JLE6 195 aa3.27□□□□□ -1.89
HDGFL3-205ENST00000568129 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
HDGFL3-205ENST00000568129 KRTAP4-8Q9BYQ9 185 aa3.27□□□□□ -1.89
HDGFL3-205ENST00000568129 CYSTM1Q9H1C7 97 aa3.27□□□□□ -1.89
HDGFL3-205ENST00000568129 SPRR2FQ96RM1 72 aa3.26□□□□□ -1.89
HDGFL3-205ENST00000568129 KRTAP20-1Q3LI63 56 aa3.24□□□□□ -1.89
HDGFL3-205ENST00000568129 LCE1AQ5T7P2 110 aa3.23□□□□□ -1.89
HDGFL3-205ENST00000568129 KRTAP2-3P0C7H8 128 aa3.21□□□□□ -1.9
HDGFL3-205ENST00000568129 SPRR2EP22531 72 aa3.21□□□□□ -1.9
HDGFL3-205ENST00000568129 SPRR2BP35325 72 aa3.21□□□□□ -1.9
HDGFL3-205ENST00000568129 SPRR2AP35326 72 aa3.21□□□□□ -1.9
HDGFL3-205ENST00000568129 KRTAP2-4Q9BYR9 128 aa3.21□□□□□ -1.9
HDGFL3-205ENST00000568129 SERP1Q9Y6X1 66 aa3.2□□□□□ -1.9
HDGFL3-205ENST00000568129 SEC61GP60059 68 aa3.19□□□□□ -1.9
HDGFL3-205ENST00000568129 A0A1B0GU33 70 aa3.17□□□□□ -1.9
HDGFL3-205ENST00000568129 ANAPC13Q9BS18 74 aa3.17□□□□□ -1.9
HDGFL3-205ENST00000568129 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.91
HDGFL3-205ENST00000568129 KRTAP12-1P59990 96 aa3.14□□□□□ -1.91
HDGFL3-205ENST00000568129 CAMK2N1Q7Z7J9 78 aa3.14□□□□□ -1.91
HDGFL3-205ENST00000568129 CCDC179H3BU77 68 aa3.13□□□□□ -1.91
HDGFL3-205ENST00000568129 ATP5EP56381 51 aaPredicted RBP3.11□□□□□ -1.91
HDGFL3-205ENST00000568129 KRTAP2-2Q9BYT5 123 aa3.11□□□□□ -1.91
HDGFL3-205ENST00000568129 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
HDGFL3-205ENST00000568129 A0A0D9SG42 100 aa3.1□□□□□ -1.91
HDGFL3-205ENST00000568129 A0A1B0GU69 56 aa3.1□□□□□ -1.91
HDGFL3-205ENST00000568129 SPRR2DP22532 72 aa3.1□□□□□ -1.91
HDGFL3-205ENST00000568129 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
HDGFL3-205ENST00000568129 SMIM26A0A096LP01 95 aa3.08□□□□□ -1.92
HDGFL3-205ENST00000568129 SPINT4Q6UDR6 99 aa3.07□□□□□ -1.92
HDGFL3-205ENST00000568129 LINC01558Q9Y6Z2 57 aa3.06□□□□□ -1.92
HDGFL3-205ENST00000568129 MT1EP04732 61 aa3.05□□□□□ -1.92
HDGFL3-205ENST00000568129 LCE5AQ5TCM9 118 aa3.05□□□□□ -1.92
HDGFL3-205ENST00000568129 A8MU10 97 aa3.03□□□□□ -1.92
HDGFL3-205ENST00000568129 TMEM258P61165 79 aa3.03□□□□□ -1.92
HDGFL3-205ENST00000568129 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
HDGFL3-205ENST00000568129 KRTAP19-3Q7Z4W3 81 aa3.02□□□□□ -1.93
HDGFL3-205ENST00000568129 PRR15LQ9BU68 103 aa3.02□□□□□ -1.93
HDGFL3-205ENST00000568129 C10orf95Q9H7T3 257 aa3.01□□□□□ -1.93
HDGFL3-205ENST00000568129 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
HDGFL3-205ENST00000568129 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
HDGFL3-205ENST00000568129 MT1GP13640 62 aa2.97□□□□□ -1.93
HDGFL3-205ENST00000568129 TNP1P09430 55 aa2.95□□□□□ -1.94
HDGFL3-205ENST00000568129 UQCR11O14957 56 aa2.94□□□□□ -1.94
HDGFL3-205ENST00000568129 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
HDGFL3-205ENST00000568129 MT1LQ93083 61 aa2.92□□□□□ -1.94
HDGFL3-205ENST00000568129 PP632Q6XCG6 107 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 228.7 ms