RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 SERP2Q8N6R1 65 aa8.13□□□□□ -1.11
CLN6-208ENST00000567060 SYNE2Q8WXH0 6885 aaKnown RBP8.13□□□□□ -1.11
CLN6-208ENST00000567060 KLKP1Q107X0 134 aa8.11□□□□□ -1.11
CLN6-208ENST00000567060 S4R3F8 94 aa8.07□□□□□ -1.12
CLN6-208ENST00000567060 KRTAP19-1Q8IUB9 90 aa8.05□□□□□ -1.12
CLN6-208ENST00000567060 LCE2BO14633 110 aa8.01□□□□□ -1.13
CLN6-208ENST00000567060 COX7CP15954 63 aa7.99□□□□□ -1.13
CLN6-208ENST00000567060 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
CLN6-208ENST00000567060 LCA10Q71F78 164 aa7.98□□□□□ -1.13
CLN6-208ENST00000567060 C20orf197Q8N268 126 aa7.98□□□□□ -1.13
CLN6-208ENST00000567060 DMAC1Q96GE9 116 aa7.98□□□□□ -1.13
CLN6-208ENST00000567060 MT2AP02795 61 aa7.97□□□□□ -1.13
CLN6-208ENST00000567060 SNURFQ9Y675 71 aa7.95□□□□□ -1.14
CLN6-208ENST00000567060 SPANXA2-OT1Q8N9U9 137 aa7.93□□□□□ -1.14
CLN6-208ENST00000567060 NDUFC1O43677 76 aa7.92□□□□□ -1.14
CLN6-208ENST00000567060 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
CLN6-208ENST00000567060 MT1FP04733 61 aa7.91□□□□□ -1.14
CLN6-208ENST00000567060 ANAPC13Q9BS18 74 aa7.9□□□□□ -1.14
CLN6-208ENST00000567060 KRTAP3-3Q9BYR6 98 aa7.9□□□□□ -1.14
CLN6-208ENST00000567060 ACYP2P14621 99 aa7.89□□□□□ -1.15
CLN6-208ENST00000567060 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
CLN6-208ENST00000567060 H0YAA0 97 aa7.8□□□□□ -1.16
CLN6-208ENST00000567060 KRTAP19-6Q3LI70 58 aa7.77□□□□□ -1.17
CLN6-208ENST00000567060 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
CLN6-208ENST00000567060 H7BZZ5 65 aa7.75□□□□□ -1.17
CLN6-208ENST00000567060 CHKB-CPT1BH3BT56 60 aa7.72□□□□□ -1.17
CLN6-208ENST00000567060 KRTAP6-3Q3LI67 103 aa7.71□□□□□ -1.18
CLN6-208ENST00000567060 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
CLN6-208ENST00000567060 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
CLN6-208ENST00000567060 CCDC179H3BU77 68 aa7.66□□□□□ -1.18
CLN6-208ENST00000567060 NEBP20929 6669 aa7.65□□□□□ -1.19
CLN6-208ENST00000567060 ATP5EP56381 51 aaPredicted RBP7.61□□□□□ -1.19
CLN6-208ENST00000567060 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
CLN6-208ENST00000567060 COA5Q86WW8 74 aa7.6□□□□□ -1.19
CLN6-208ENST00000567060 SPRR2GQ9BYE4 73 aa7.57□□□□□ -1.2
CLN6-208ENST00000567060 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
CLN6-208ENST00000567060 TMEM258P61165 79 aa7.52□□□□□ -1.21
CLN6-208ENST00000567060 PCP4P48539 62 aa7.49□□□□□ -1.21
CLN6-208ENST00000567060 KRTAP3-2Q9BYR7 98 aa7.48□□□□□ -1.21
CLN6-208ENST00000567060 P0C880 135 aa7.45□□□□□ -1.22
CLN6-208ENST00000567060 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
CLN6-208ENST00000567060 R4GN34 69 aa7.43□□□□□ -1.22
CLN6-208ENST00000567060 Q5VV11 94 aa7.41□□□□□ -1.22
CLN6-208ENST00000567060 SEC61GP60059 68 aa7.39□□□□□ -1.23
CLN6-208ENST00000567060 M0QZ58 72 aa7.36□□□□□ -1.23
CLN6-208ENST00000567060 SERP1Q9Y6X1 66 aa7.36□□□□□ -1.23
CLN6-208ENST00000567060 KRTAP20-1Q3LI63 56 aa7.34□□□□□ -1.23
CLN6-208ENST00000567060 MT1BP07438 61 aa7.33□□□□□ -1.24
CLN6-208ENST00000567060 MDN1Q9NU22 5596 aa7.27□□□□□ -1.25
CLN6-208ENST00000567060 A0A1B0GU69 56 aa7.24□□□□□ -1.25
CLN6-208ENST00000567060 KMT2DO14686 5537 aa7.22□□□□□ -1.25
CLN6-208ENST00000567060 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
CLN6-208ENST00000567060 PRR15LQ9BU68 103 aa7.2□□□□□ -1.26
CLN6-208ENST00000567060 A6NN06 94 aa7.18□□□□□ -1.26
CLN6-208ENST00000567060 A0A1B0GU33 70 aa7.17□□□□□ -1.26
CLN6-208ENST00000567060 LINC01554Q52M75 96 aa7.17□□□□□ -1.26
CLN6-208ENST00000567060 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
CLN6-208ENST00000567060 KRTAP5-9P26371 169 aa7.16□□□□□ -1.26
CLN6-208ENST00000567060 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
CLN6-208ENST00000567060 KRTAP13-4Q3LI77 160 aa7.1□□□□□ -1.27
CLN6-208ENST00000567060 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
CLN6-208ENST00000567060 V9GYY9 64 aa7.09□□□□□ -1.27
CLN6-208ENST00000567060 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
CLN6-208ENST00000567060 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
CLN6-208ENST00000567060 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
CLN6-208ENST00000567060 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
CLN6-208ENST00000567060 SPATA8Q6RVD6 105 aa7.01□□□□□ -1.29
CLN6-208ENST00000567060 Q1T7F1 81 aa6.99□□□□□ -1.29
CLN6-208ENST00000567060 MT1XP80297 61 aa6.98□□□□□ -1.29
CLN6-208ENST00000567060 UQCR11O14957 56 aa6.95□□□□□ -1.3
CLN6-208ENST00000567060 A0A0D9SG42 100 aa6.93□□□□□ -1.3
CLN6-208ENST00000567060 CAMK2N1Q7Z7J9 78 aa6.89□□□□□ -1.31
CLN6-208ENST00000567060 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
CLN6-208ENST00000567060 SPINT4Q6UDR6 99 aa6.85□□□□□ -1.31
CLN6-208ENST00000567060 PSPHP1O15172 72 aa6.82□□□□□ -1.32
CLN6-208ENST00000567060 KRTAP12-2P59991 146 aa6.82□□□□□ -1.32
CLN6-208ENST00000567060 A8MU10 97 aa6.81□□□□□ -1.32
CLN6-208ENST00000567060 SPRR2EP22531 72 aa6.81□□□□□ -1.32
CLN6-208ENST00000567060 SPRR2BP35325 72 aa6.81□□□□□ -1.32
CLN6-208ENST00000567060 SPRR2AP35326 72 aa6.81□□□□□ -1.32
CLN6-208ENST00000567060 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
CLN6-208ENST00000567060 KRTAP2-2Q9BYT5 123 aa6.79□□□□□ -1.32
CLN6-208ENST00000567060 KRTAP2-1Q9BYU5 128 aa6.79□□□□□ -1.32
CLN6-208ENST00000567060 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
CLN6-208ENST00000567060 LCE1AQ5T7P2 110 aa6.7□□□□□ -1.34
CLN6-208ENST00000567060 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
CLN6-208ENST00000567060 A6NED7 52 aa6.67□□□□□ -1.34
CLN6-208ENST00000567060 K7ERS5 55 aa6.66□□□□□ -1.34
CLN6-208ENST00000567060 KRTAP10-7P60409 375 aaPredicted RBP6.63□□□□□ -1.35
CLN6-208ENST00000567060 KRTAP8-1Q8IUC2 63 aa6.59□□□□□ -1.35
CLN6-208ENST00000567060 SPRR2DP22532 72 aa6.58□□□□□ -1.36
CLN6-208ENST00000567060 GPR98Q8WXG9 6306 aa6.54□□□□□ -1.36
CLN6-208ENST00000567060 C10orf95Q9H7T3 257 aa6.5□□□□□ -1.37
CLN6-208ENST00000567060 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
CLN6-208ENST00000567060 TNP1P09430 55 aa6.49□□□□□ -1.37
CLN6-208ENST00000567060 KRTAP4-8A0A0G2JLE6 195 aa6.48□□□□□ -1.37
CLN6-208ENST00000567060 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
CLN6-208ENST00000567060 LCE3BQ5TA77 95 aa6.46□□□□□ -1.38
CLN6-208ENST00000567060 DSTQ03001 7570 aaKnown RBP6.4□□□□□ -1.38
CLN6-208ENST00000567060 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms