RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 KRTAP3-3Q9BYR6 98 aa12.23□□□□□ -0.45
NME3-209ENST00000566600 CRCT1Q9UGL9 99 aa12.22□□□□□ -0.45
NME3-209ENST00000566600 FSIP2Q5CZC0 6907 aa12.17□□□□□ -0.46
NME3-209ENST00000566600 NDUFC1O43677 76 aa12.17□□□□□ -0.46
NME3-209ENST00000566600 SERP2Q8N6R1 65 aa12.11□□□□□ -0.47
NME3-209ENST00000566600 DMAC1Q96GE9 116 aa12.11□□□□□ -0.47
NME3-209ENST00000566600 LCE2BO14633 110 aa12.1□□□□□ -0.47
NME3-209ENST00000566600 SNURFQ9Y675 71 aa12.02□□□□□ -0.49
NME3-209ENST00000566600 C20orf197Q8N268 126 aa11.99□□□□□ -0.49
NME3-209ENST00000566600 USH2AO75445 5202 aa11.97□□□□□ -0.49
NME3-209ENST00000566600 H0YAA0 97 aa11.94□□□□□ -0.5
NME3-209ENST00000566600 ACYP2P14621 99 aa11.94□□□□□ -0.5
NME3-209ENST00000566600 SPANXA2-OT1Q8N9U9 137 aa11.86□□□□□ -0.51
NME3-209ENST00000566600 COX7CP15954 63 aa11.85□□□□□ -0.51
NME3-209ENST00000566600 KRTAP19-1Q8IUB9 90 aa11.84□□□□□ -0.51
NME3-209ENST00000566600 CRIPTQ9P021 101 aa11.84□□□□□ -0.51
NME3-209ENST00000566600 SPRR2GQ9BYE4 73 aa11.8□□□□□ -0.52
NME3-209ENST00000566600 ADM2Q7Z4H4 148 aa11.79□□□□□ -0.52
NME3-209ENST00000566600 SPTSSBQ8NFR3 76 aa11.76□□□□□ -0.53
NME3-209ENST00000566600 SSPOA2VEC9 5147 aa11.76□□□□□ -0.53
NME3-209ENST00000566600 CHKB-CPT1BH3BT56 60 aa11.73□□□□□ -0.53
NME3-209ENST00000566600 ANAPC13Q9BS18 74 aa11.68□□□□□ -0.54
NME3-209ENST00000566600 KRTAP19-8Q3LI54 63 aa11.65□□□□□ -0.54
NME3-209ENST00000566600 KRTAP19-6Q3LI70 58 aa11.65□□□□□ -0.54
NME3-209ENST00000566600 Q5VV11 94 aa11.64□□□□□ -0.55
NME3-209ENST00000566600 H7BZZ5 65 aa11.55□□□□□ -0.56
NME3-209ENST00000566600 MT1BP07438 61 aa11.55□□□□□ -0.56
NME3-209ENST00000566600 P0C880 135 aa11.54□□□□□ -0.56
NME3-209ENST00000566600 KRTAP3-2Q9BYR7 98 aa11.52□□□□□ -0.57
NME3-209ENST00000566600 CYSTM1Q9H1C7 97 aa11.51□□□□□ -0.57
NME3-209ENST00000566600 R4GN34 69 aa11.49□□□□□ -0.57
NME3-209ENST00000566600 COA5Q86WW8 74 aa11.47□□□□□ -0.57
NME3-209ENST00000566600 FCGBPQ9Y6R7 5405 aaPredicted RBP11.46□□□□□ -0.57
NME3-209ENST00000566600 M0QZ58 72 aa11.4□□□□□ -0.58
NME3-209ENST00000566600 CCDC179H3BU77 68 aa11.38□□□□□ -0.59
NME3-209ENST00000566600 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.34□□□□□ -0.59
NME3-209ENST00000566600 A6NN06 94 aa11.3□□□□□ -0.6
NME3-209ENST00000566600 KRTAP10-5P60370 271 aa11.23□□□□□ -0.61
NME3-209ENST00000566600 PLAC4Q8WY50 150 aa11.23□□□□□ -0.61
NME3-209ENST00000566600 ATP5EP56381 51 aaPredicted RBP11.2□□□□□ -0.62
NME3-209ENST00000566600 LINC01554Q52M75 96 aa11.19□□□□□ -0.62
NME3-209ENST00000566600 SEC61GP60059 68 aa11.18□□□□□ -0.62
NME3-209ENST00000566600 SERP1Q9Y6X1 66 aa11.13□□□□□ -0.63
NME3-209ENST00000566600 KRTAP9-7A8MTY7 169 aa11.07□□□□□ -0.64
NME3-209ENST00000566600 PRO2289Q9P1D8 64 aa11.06□□□□□ -0.64
NME3-209ENST00000566600 TMEM258P61165 79 aa11.04□□□□□ -0.64
NME3-209ENST00000566600 MACF1Q9UPN3 7388 aaKnown RBP11.01□□□□□ -0.65
NME3-209ENST00000566600 MT1XP80297 61 aa10.95□□□□□ -0.66
NME3-209ENST00000566600 KRTAP13-4Q3LI77 160 aa10.94□□□□□ -0.66
NME3-209ENST00000566600 A0A1B0GU33 70 aa10.9□□□□□ -0.66
NME3-209ENST00000566600 A0A1B0GU69 56 aa10.9□□□□□ -0.66
NME3-209ENST00000566600 SYNE2Q8WXH0 6885 aaKnown RBP10.84□□□□□ -0.67
NME3-209ENST00000566600 KRTAP6-3Q3LI67 103 aa10.78□□□□□ -0.68
NME3-209ENST00000566600 SPATA8Q6RVD6 105 aa10.76□□□□□ -0.69
NME3-209ENST00000566600 PRR15LQ9BU68 103 aa10.76□□□□□ -0.69
NME3-209ENST00000566600 A0A0D9SG42 100 aa10.7□□□□□ -0.7
NME3-209ENST00000566600 LINC01558Q9Y6Z2 57 aa10.69□□□□□ -0.7
NME3-209ENST00000566600 KRTAP12-2P59991 146 aa10.64□□□□□ -0.71
NME3-209ENST00000566600 CAMK2N1Q7Z7J9 78 aa10.64□□□□□ -0.71
NME3-209ENST00000566600 SMIM26A0A096LP01 95 aa10.62□□□□□ -0.71
NME3-209ENST00000566600 SPINT4Q6UDR6 99 aa10.54□□□□□ -0.72
NME3-209ENST00000566600 KRTAP12-1P59990 96 aa10.49□□□□□ -0.73
NME3-209ENST00000566600 KRTAP5-9P26371 169 aa10.47□□□□□ -0.73
NME3-209ENST00000566600 PCP4P48539 62 aa10.46□□□□□ -0.73
NME3-209ENST00000566600 A8MU10 97 aa10.44□□□□□ -0.74
NME3-209ENST00000566600 KRTAP10-7P60409 375 aaPredicted RBP10.44□□□□□ -0.74
NME3-209ENST00000566600 KRTAP10-12P60413 245 aa10.43□□□□□ -0.74
NME3-209ENST00000566600 V9GYY9 64 aa10.41□□□□□ -0.74
NME3-209ENST00000566600 KRTAP8-1Q8IUC2 63 aa10.39□□□□□ -0.75
NME3-209ENST00000566600 UQCR11O14957 56 aa10.38□□□□□ -0.75
NME3-209ENST00000566600 Q1T7F1 81 aa10.31□□□□□ -0.76
NME3-209ENST00000566600 KRTAP4-8A0A0G2JLE6 195 aa10.3□□□□□ -0.76
NME3-209ENST00000566600 KRTAP4-8Q9BYQ9 185 aa10.3□□□□□ -0.76
NME3-209ENST00000566600 KMT2DO14686 5537 aa10.3□□□□□ -0.76
NME3-209ENST00000566600 SPRR2FQ96RM1 72 aa10.26□□□□□ -0.77
NME3-209ENST00000566600 PSPHP1O15172 72 aa10.2□□□□□ -0.78
NME3-209ENST00000566600 RPS28P62857 69 aaKnown RBP10.19□□□□□ -0.78
NME3-209ENST00000566600 MIR22HGQ0VDD5 57 aa10.17□□□□□ -0.78
NME3-209ENST00000566600 MUC12Q9UKN1 5478 aa10.15□□□□□ -0.78
NME3-209ENST00000566600 NEBP20929 6669 aa10.15□□□□□ -0.78
NME3-209ENST00000566600 SPRR2EP22531 72 aa10□□□□□ -0.81
NME3-209ENST00000566600 SPRR2BP35325 72 aa10□□□□□ -0.81
NME3-209ENST00000566600 SPRR2AP35326 72 aa10□□□□□ -0.81
NME3-209ENST00000566600 MDN1Q9NU22 5596 aa9.99□□□□□ -0.81
NME3-209ENST00000566600 C10orf95Q9H7T3 257 aa9.98□□□□□ -0.81
NME3-209ENST00000566600 K7ERS5 55 aa9.96□□□□□ -0.82
NME3-209ENST00000566600 TNP1P09430 55 aa9.94□□□□□ -0.82
NME3-209ENST00000566600 A6NED7 52 aa9.92□□□□□ -0.82
NME3-209ENST00000566600 LCE1AQ5T7P2 110 aa9.92□□□□□ -0.82
NME3-209ENST00000566600 KRTAP20-1Q3LI63 56 aa9.77□□□□□ -0.85
NME3-209ENST00000566600 KRTAP19-7Q3SYF9 63 aa9.77□□□□□ -0.85
NME3-209ENST00000566600 MT1EP04732 61 aa9.68□□□□□ -0.86
NME3-209ENST00000566600 SPRR2DP22532 72 aa9.68□□□□□ -0.86
NME3-209ENST00000566600 KRTAP2-3P0C7H8 128 aa9.66□□□□□ -0.86
NME3-209ENST00000566600 LCE3AQ5TA76 89 aa9.66□□□□□ -0.86
NME3-209ENST00000566600 KRTAP2-4Q9BYR9 128 aa9.66□□□□□ -0.86
NME3-209ENST00000566600 KRTAP19-5Q3LI72 72 aa9.65□□□□□ -0.86
NME3-209ENST00000566600 KRTAP25-1Q3LHN0 102 aa9.61□□□□□ -0.87
NME3-209ENST00000566600 CDC42SE1Q9NRR8 79 aa9.56□□□□□ -0.88
NME3-209ENST00000566600 KRTAP19-3Q7Z4W3 81 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms