RNA–Protein interactions for RNA: ENST00000565639.6

PKD1-230, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 1,976 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-230ENST00000565639 BRK1Q8WUW1 75 aa9.72□□□□□ -0.85
PKD1-230ENST00000565639 Q1T7F1 81 aa9.69□□□□□ -0.86
PKD1-230ENST00000565639 H1FX-AS1Q4G0G2 97 aa9.69□□□□□ -0.86
PKD1-230ENST00000565639 SPTSSBQ8NFR3 76 aa9.66□□□□□ -0.86
PKD1-230ENST00000565639 S4R3F8 94 aa9.61□□□□□ -0.87
PKD1-230ENST00000565639 LINC01558Q9Y6Z2 57 aa9.6□□□□□ -0.87
PKD1-230ENST00000565639 LCA10Q71F78 164 aa9.58□□□□□ -0.88
PKD1-230ENST00000565639 UBR4Q5T4S7 5183 aa9.58□□□□□ -0.88
PKD1-230ENST00000565639 PMAIP1Q13794 54 aa9.56□□□□□ -0.88
PKD1-230ENST00000565639 MUC2Q02817 5179 aa9.55□□□□□ -0.88
PKD1-230ENST00000565639 KRTAP3-3Q9BYR6 98 aa9.55□□□□□ -0.88
PKD1-230ENST00000565639 KRTAP19-2Q3LHN2 52 aa9.54□□□□□ -0.88
PKD1-230ENST00000565639 PRR15LQ9BU68 103 aa9.48□□□□□ -0.89
PKD1-230ENST00000565639 PSPHP1O15172 72 aa9.48□□□□□ -0.89
PKD1-230ENST00000565639 A0A1B0GU69 56 aa9.43□□□□□ -0.9
PKD1-230ENST00000565639 RNF213Q63HN8 5207 aa9.43□□□□□ -0.9
PKD1-230ENST00000565639 Q5VV11 94 aa9.41□□□□□ -0.9
PKD1-230ENST00000565639 CSAG1Q6PB30 78 aa9.41□□□□□ -0.9
PKD1-230ENST00000565639 LCE2CQ5TA81 110 aa9.31□□□□□ -0.92
PKD1-230ENST00000565639 FLGP20930 4061 aaPredicted RBP9.3□□□□□ -0.92
PKD1-230ENST00000565639 H0YAA0 97 aa9.23□□□□□ -0.93
PKD1-230ENST00000565639 KTN1-AS1Q86SY8 53 aa9.23□□□□□ -0.93
PKD1-230ENST00000565639 KRTAP3-2Q9BYR7 98 aa9.21□□□□□ -0.93
PKD1-230ENST00000565639 A6NED7 52 aa9.2□□□□□ -0.94
PKD1-230ENST00000565639 KRTAP10-6P60371 365 aaPredicted RBP9.2□□□□□ -0.94
PKD1-230ENST00000565639 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
PKD1-230ENST00000565639 UQCR11O14957 56 aa9.17□□□□□ -0.94
PKD1-230ENST00000565639 FAT4Q6V0I7 4981 aa9.17□□□□□ -0.94
PKD1-230ENST00000565639 A0A1B0GU33 70 aa9.15□□□□□ -0.95
PKD1-230ENST00000565639 P0C880 135 aa9.12□□□□□ -0.95
PKD1-230ENST00000565639 MT1HP80294 61 aa9.12□□□□□ -0.95
PKD1-230ENST00000565639 A8MU10 97 aa9.08□□□□□ -0.96
PKD1-230ENST00000565639 A6NN06 94 aa9.08□□□□□ -0.96
PKD1-230ENST00000565639 CDC42SE1Q9NRR8 79 aa9.06□□□□□ -0.96
PKD1-230ENST00000565639 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
PKD1-230ENST00000565639 MIR22HGQ0VDD5 57 aa9.04□□□□□ -0.96
PKD1-230ENST00000565639 M0R2T5 61 aa9.03□□□□□ -0.96
PKD1-230ENST00000565639 M0QZ58 72 aa8.93□□□□□ -0.98
PKD1-230ENST00000565639 KRTAP13-4Q3LI77 160 aa8.93□□□□□ -0.98
PKD1-230ENST00000565639 R4GN34 69 aa8.86□□□□□ -0.99
PKD1-230ENST00000565639 LORP23490 312 aaPredicted RBP8.86□□□□□ -0.99
PKD1-230ENST00000565639 CRIPTQ9P021 101 aa8.83□□□□□ -1
PKD1-230ENST00000565639 KRTAP9-8Q9BYQ0 159 aa8.79□□□□□ -1
PKD1-230ENST00000565639 LCE2AQ5TA79 106 aaPredicted RBP8.77□□□□□ -1.01
PKD1-230ENST00000565639 A0A0D9SG42 100 aa8.76□□□□□ -1.01
PKD1-230ENST00000565639 MT2AP02795 61 aa8.76□□□□□ -1.01
PKD1-230ENST00000565639 MT1FP04733 61 aa8.71□□□□□ -1.02
PKD1-230ENST00000565639 KRTAP10-10P60014 251 aa8.7□□□□□ -1.02
PKD1-230ENST00000565639 LINC01554Q52M75 96 aa8.66□□□□□ -1.02
PKD1-230ENST00000565639 K7ERS5 55 aa8.66□□□□□ -1.02
PKD1-230ENST00000565639 SPRR2GQ9BYE4 73 aa8.62□□□□□ -1.03
PKD1-230ENST00000565639 KRTAP12-1P59990 96 aa8.61□□□□□ -1.03
PKD1-230ENST00000565639 KRTAP12-2P59991 146 aa8.58□□□□□ -1.04
PKD1-230ENST00000565639 KRTAP19-1Q8IUB9 90 aa8.57□□□□□ -1.04
PKD1-230ENST00000565639 SPINT4Q6UDR6 99 aa8.56□□□□□ -1.04
PKD1-230ENST00000565639 H3BS24 57 aa8.55□□□□□ -1.04
PKD1-230ENST00000565639 PRAC1Q96KF2 57 aa8.54□□□□□ -1.04
PKD1-230ENST00000565639 KRTAP9-3Q9BYQ3 159 aa8.48□□□□□ -1.05
PKD1-230ENST00000565639 KRTAP19-8Q3LI54 63 aa8.39□□□□□ -1.07
PKD1-230ENST00000565639 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
PKD1-230ENST00000565639 CAMK2N1Q7Z7J9 78 aa8.3□□□□□ -1.08
PKD1-230ENST00000565639 ROMO1P60602 79 aa8.29□□□□□ -1.08
PKD1-230ENST00000565639 MT1BP07438 61 aa8.26□□□□□ -1.09
PKD1-230ENST00000565639 LCE2BO14633 110 aa8.22□□□□□ -1.09
PKD1-230ENST00000565639 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.11
PKD1-230ENST00000565639 KRTAP25-1Q3LHN0 102 aa8.06□□□□□ -1.12
PKD1-230ENST00000565639 USH2AO75445 5202 aa7.99□□□□□ -1.13
PKD1-230ENST00000565639 MT1XP80297 61 aa7.99□□□□□ -1.13
PKD1-230ENST00000565639 KRTAP10-5P60370 271 aa7.98□□□□□ -1.13
PKD1-230ENST00000565639 LCE2DQ5TA82 110 aaPredicted RBP7.97□□□□□ -1.13
PKD1-230ENST00000565639 FSIP2Q5CZC0 6907 aa7.95□□□□□ -1.14
PKD1-230ENST00000565639 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
PKD1-230ENST00000565639 TNP1P09430 55 aa7.91□□□□□ -1.14
PKD1-230ENST00000565639 SSPOA2VEC9 5147 aa7.77□□□□□ -1.17
PKD1-230ENST00000565639 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
PKD1-230ENST00000565639 KRTAP23-1A1A580 65 aa7.71□□□□□ -1.17
PKD1-230ENST00000565639 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
PKD1-230ENST00000565639 KRTAP9-2Q9BYQ4 174 aa7.71□□□□□ -1.18
PKD1-230ENST00000565639 KRTAP10-7P60409 375 aaPredicted RBP7.66□□□□□ -1.18
PKD1-230ENST00000565639 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
PKD1-230ENST00000565639 LCE3AQ5TA76 89 aa7.55□□□□□ -1.2
PKD1-230ENST00000565639 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
PKD1-230ENST00000565639 NDUFAF8A1L188 74 aa7.43□□□□□ -1.22
PKD1-230ENST00000565639 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
PKD1-230ENST00000565639 FCGBPQ9Y6R7 5405 aaPredicted RBP7.43□□□□□ -1.22
PKD1-230ENST00000565639 CRCT1Q9UGL9 99 aa7.36□□□□□ -1.23
PKD1-230ENST00000565639 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
PKD1-230ENST00000565639 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
PKD1-230ENST00000565639 KMT2DO14686 5537 aa7.32□□□□□ -1.24
PKD1-230ENST00000565639 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
PKD1-230ENST00000565639 KRTAP9-6A0A140TA67 174 aa7.26□□□□□ -1.25
PKD1-230ENST00000565639 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
PKD1-230ENST00000565639 KRTAP19-5Q3LI72 72 aa7.21□□□□□ -1.26
PKD1-230ENST00000565639 MACF1Q9UPN3 7388 aaKnown RBP7.19□□□□□ -1.26
PKD1-230ENST00000565639 KRTAP19-7Q3SYF9 63 aa7.13□□□□□ -1.27
PKD1-230ENST00000565639 SYNE2Q8WXH0 6885 aaKnown RBP7.05□□□□□ -1.28
PKD1-230ENST00000565639 LUZP6Q538Z0 58 aa7.02□□□□□ -1.29
PKD1-230ENST00000565639 MT1EP04732 61 aa7□□□□□ -1.29
PKD1-230ENST00000565639 KRTAP19-4Q3LI73 84 aa6.88□□□□□ -1.31
PKD1-230ENST00000565639 MT1LQ93083 61 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 165.7 ms