RNA–Protein interactions for RNA: ENST00000565070.5

NSMCE1-208, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-208ENST00000565070 MUC17Q685J3 4493 aa6.59□□□□□ -1.36
NSMCE1-208ENST00000565070 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
NSMCE1-208ENST00000565070 COX6B2Q6YFQ2 88 aa6.53□□□□□ -1.36
NSMCE1-208ENST00000565070 A6NED7 52 aa6.53□□□□□ -1.36
NSMCE1-208ENST00000565070 A8MU10 97 aa6.52□□□□□ -1.37
NSMCE1-208ENST00000565070 LCA10Q71F78 164 aa6.51□□□□□ -1.37
NSMCE1-208ENST00000565070 SEC61GP60059 68 aa6.51□□□□□ -1.37
NSMCE1-208ENST00000565070 UBR4Q5T4S7 5183 aa6.5□□□□□ -1.37
NSMCE1-208ENST00000565070 CDC42SE1Q9NRR8 79 aa6.49□□□□□ -1.37
NSMCE1-208ENST00000565070 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
NSMCE1-208ENST00000565070 KRTAP4-1Q9BYQ7 146 aa6.47□□□□□ -1.37
NSMCE1-208ENST00000565070 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
NSMCE1-208ENST00000565070 A0A1B0GU69 56 aa6.45□□□□□ -1.38
NSMCE1-208ENST00000565070 RNF213Q63HN8 5207 aa6.4□□□□□ -1.38
NSMCE1-208ENST00000565070 RBM12B-AS1Q9P1G2 102 aa6.39□□□□□ -1.39
NSMCE1-208ENST00000565070 MUC2Q02817 5179 aa6.38□□□□□ -1.39
NSMCE1-208ENST00000565070 A6NN06 94 aa6.36□□□□□ -1.39
NSMCE1-208ENST00000565070 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
NSMCE1-208ENST00000565070 KTN1-AS1Q86SY8 53 aa6.32□□□□□ -1.4
NSMCE1-208ENST00000565070 H1FX-AS1Q4G0G2 97 aa6.31□□□□□ -1.4
NSMCE1-208ENST00000565070 S4R3F8 94 aa6.3□□□□□ -1.4
NSMCE1-208ENST00000565070 UQCR11O14957 56 aa6.3□□□□□ -1.4
NSMCE1-208ENST00000565070 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
NSMCE1-208ENST00000565070 SPATA8Q6RVD6 105 aa6.28□□□□□ -1.4
NSMCE1-208ENST00000565070 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
NSMCE1-208ENST00000565070 LCE2CQ5TA81 110 aa6.24□□□□□ -1.41
NSMCE1-208ENST00000565070 A0A1B0GU33 70 aa6.2□□□□□ -1.42
NSMCE1-208ENST00000565070 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
NSMCE1-208ENST00000565070 KRTAP10-6P60371 365 aaPredicted RBP6.17□□□□□ -1.42
NSMCE1-208ENST00000565070 H0YAA0 97 aa6.16□□□□□ -1.42
NSMCE1-208ENST00000565070 KRTAP3-2Q9BYR7 98 aa6.16□□□□□ -1.42
NSMCE1-208ENST00000565070 FLGP20930 4061 aaPredicted RBP6.16□□□□□ -1.42
NSMCE1-208ENST00000565070 MT1HP80294 61 aa6.15□□□□□ -1.42
NSMCE1-208ENST00000565070 CSAG1Q6PB30 78 aa6.14□□□□□ -1.43
NSMCE1-208ENST00000565070 M0R2T5 61 aa6.12□□□□□ -1.43
NSMCE1-208ENST00000565070 LCE2AQ5TA79 106 aaPredicted RBP6.11□□□□□ -1.43
NSMCE1-208ENST00000565070 P0C880 135 aa6.07□□□□□ -1.44
NSMCE1-208ENST00000565070 ADM2Q7Z4H4 148 aa6.06□□□□□ -1.44
NSMCE1-208ENST00000565070 KRTAP13-4Q3LI77 160 aa6.02□□□□□ -1.45
NSMCE1-208ENST00000565070 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
NSMCE1-208ENST00000565070 LORP23490 312 aaPredicted RBP5.95□□□□□ -1.46
NSMCE1-208ENST00000565070 M0QZ58 72 aa5.92□□□□□ -1.46
NSMCE1-208ENST00000565070 K7ERS5 55 aa5.9□□□□□ -1.46
NSMCE1-208ENST00000565070 A0A0D9SG42 100 aa5.9□□□□□ -1.47
NSMCE1-208ENST00000565070 KRTAP9-8Q9BYQ0 159 aa5.88□□□□□ -1.47
NSMCE1-208ENST00000565070 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
NSMCE1-208ENST00000565070 MT2AP02795 61 aa5.84□□□□□ -1.47
NSMCE1-208ENST00000565070 H3BS24 57 aa5.83□□□□□ -1.48
NSMCE1-208ENST00000565070 R4GN34 69 aa5.82□□□□□ -1.48
NSMCE1-208ENST00000565070 KRTAP10-10P60014 251 aa5.81□□□□□ -1.48
NSMCE1-208ENST00000565070 KRTAP12-1P59990 96 aa5.8□□□□□ -1.48
NSMCE1-208ENST00000565070 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
NSMCE1-208ENST00000565070 MT1FP04733 61 aa5.79□□□□□ -1.48
NSMCE1-208ENST00000565070 KRTAP25-1Q3LHN0 102 aa5.75□□□□□ -1.49
NSMCE1-208ENST00000565070 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
NSMCE1-208ENST00000565070 CRIPTQ9P021 101 aa5.74□□□□□ -1.49
NSMCE1-208ENST00000565070 ROMO1P60602 79 aa5.72□□□□□ -1.49
NSMCE1-208ENST00000565070 KRTAP9-3Q9BYQ3 159 aa5.68□□□□□ -1.5
NSMCE1-208ENST00000565070 LCE2DQ5TA82 110 aaPredicted RBP5.68□□□□□ -1.5
NSMCE1-208ENST00000565070 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
NSMCE1-208ENST00000565070 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
NSMCE1-208ENST00000565070 KRTAP9-2Q9BYQ4 174 aa5.57□□□□□ -1.52
NSMCE1-208ENST00000565070 LCE2BO14633 110 aa5.55□□□□□ -1.52
NSMCE1-208ENST00000565070 KRTAP19-8Q3LI54 63 aa5.51□□□□□ -1.53
NSMCE1-208ENST00000565070 C10orf95Q9H7T3 257 aa5.48□□□□□ -1.53
NSMCE1-208ENST00000565070 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
NSMCE1-208ENST00000565070 MT1BP07438 61 aa5.43□□□□□ -1.54
NSMCE1-208ENST00000565070 PLAC4Q8WY50 150 aa5.41□□□□□ -1.54
NSMCE1-208ENST00000565070 USH2AO75445 5202 aa5.39□□□□□ -1.55
NSMCE1-208ENST00000565070 FSIP2Q5CZC0 6907 aa5.36□□□□□ -1.55
NSMCE1-208ENST00000565070 CRCT1Q9UGL9 99 aa5.34□□□□□ -1.55
NSMCE1-208ENST00000565070 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
NSMCE1-208ENST00000565070 A0A0A0MQY5 61 aa5.3□□□□□ -1.56
NSMCE1-208ENST00000565070 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
NSMCE1-208ENST00000565070 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
NSMCE1-208ENST00000565070 SSPOA2VEC9 5147 aa5.25□□□□□ -1.57
NSMCE1-208ENST00000565070 TNP1P09430 55 aa5.24□□□□□ -1.57
NSMCE1-208ENST00000565070 KRTAP10-5P60370 271 aa5.24□□□□□ -1.57
NSMCE1-208ENST00000565070 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
NSMCE1-208ENST00000565070 PP632Q6XCG6 107 aa5.22□□□□□ -1.57
NSMCE1-208ENST00000565070 MT1XP80297 61 aa5.2□□□□□ -1.58
NSMCE1-208ENST00000565070 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
NSMCE1-208ENST00000565070 FCGBPQ9Y6R7 5405 aaPredicted RBP5.11□□□□□ -1.59
NSMCE1-208ENST00000565070 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
NSMCE1-208ENST00000565070 LCE3AQ5TA76 89 aa5□□□□□ -1.61
NSMCE1-208ENST00000565070 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
NSMCE1-208ENST00000565070 KRTAP10-12P60413 245 aa4.96□□□□□ -1.62
NSMCE1-208ENST00000565070 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.95□□□□□ -1.62
NSMCE1-208ENST00000565070 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
NSMCE1-208ENST00000565070 KMT2DO14686 5537 aa4.92□□□□□ -1.62
NSMCE1-208ENST00000565070 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
NSMCE1-208ENST00000565070 KRTAP4-8A0A0G2JLE6 195 aa4.81□□□□□ -1.64
NSMCE1-208ENST00000565070 KRTAP4-8Q9BYQ9 185 aa4.81□□□□□ -1.64
NSMCE1-208ENST00000565070 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
NSMCE1-208ENST00000565070 KRTAP6-3Q3LI67 103 aa4.79□□□□□ -1.64
NSMCE1-208ENST00000565070 LUZP6Q538Z0 58 aa4.78□□□□□ -1.64
NSMCE1-208ENST00000565070 SYNE2Q8WXH0 6885 aaKnown RBP4.78□□□□□ -1.64
NSMCE1-208ENST00000565070 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
NSMCE1-208ENST00000565070 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
NSMCE1-208ENST00000565070 KRTAP5-9P26371 169 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms