RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SPINK7P58062 85 aa6.71□□□□□ -1.34
SPG7-209ENST00000564047 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
SPG7-209ENST00000564047 C7orf65Q6ZTY9 151 aa6.7□□□□□ -1.34
SPG7-209ENST00000564047 IGKV2D-30A0A075B6S6 120 aa6.69□□□□□ -1.34
SPG7-209ENST00000564047 HRES1P13985 223 aa6.69□□□□□ -1.34
SPG7-209ENST00000564047 DMAC1Q96GE9 116 aa6.68□□□□□ -1.34
SPG7-209ENST00000564047 ACYP2P14621 99 aa6.67□□□□□ -1.34
SPG7-209ENST00000564047 PRO0628Q9UI54 55 aa6.63□□□□□ -1.35
SPG7-209ENST00000564047 LINC01558Q9Y6Z2 57 aa6.62□□□□□ -1.35
SPG7-209ENST00000564047 A8MUN3 132 aa6.59□□□□□ -1.35
SPG7-209ENST00000564047 PSPHP1O15172 72 aa6.59□□□□□ -1.35
SPG7-209ENST00000564047 Q5VV11 94 aa6.59□□□□□ -1.35
SPG7-209ENST00000564047 PRR15LQ9BU68 103 aa6.57□□□□□ -1.36
SPG7-209ENST00000564047 BRK1Q8WUW1 75 aa6.56□□□□□ -1.36
SPG7-209ENST00000564047 RBM12B-AS1Q9P1G2 102 aa6.56□□□□□ -1.36
SPG7-209ENST00000564047 CHKB-CPT1BH3BT56 60 aa6.55□□□□□ -1.36
SPG7-209ENST00000564047 COX6B2Q6YFQ2 88 aa6.52□□□□□ -1.37
SPG7-209ENST00000564047 KRTAP19-2Q3LHN2 52 aa6.51□□□□□ -1.37
SPG7-209ENST00000564047 LCE2CQ5TA81 110 aa6.51□□□□□ -1.37
SPG7-209ENST00000564047 KRTAP9-7A8MTY7 169 aa6.46□□□□□ -1.38
SPG7-209ENST00000564047 KRTAP3-1Q9BYR8 98 aa6.45□□□□□ -1.38
SPG7-209ENST00000564047 H1FX-AS1Q4G0G2 97 aa6.43□□□□□ -1.38
SPG7-209ENST00000564047 A6NED7 52 aa6.42□□□□□ -1.38
SPG7-209ENST00000564047 SPTSSBQ8NFR3 76 aa6.41□□□□□ -1.38
SPG7-209ENST00000564047 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.38
SPG7-209ENST00000564047 A0A1B0GU69 56 aa6.38□□□□□ -1.39
SPG7-209ENST00000564047 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
SPG7-209ENST00000564047 LORP23490 312 aaPredicted RBP6.36□□□□□ -1.39
SPG7-209ENST00000564047 LCA10Q71F78 164 aa6.36□□□□□ -1.39
SPG7-209ENST00000564047 MT1HP80294 61 aa6.34□□□□□ -1.39
SPG7-209ENST00000564047 S4R3F8 94 aa6.31□□□□□ -1.4
SPG7-209ENST00000564047 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
SPG7-209ENST00000564047 A8MU10 97 aa6.29□□□□□ -1.4
SPG7-209ENST00000564047 SEC61GP60059 68 aa6.28□□□□□ -1.4
SPG7-209ENST00000564047 FLGP20930 4061 aaPredicted RBP6.27□□□□□ -1.41
SPG7-209ENST00000564047 UQCR11O14957 56 aa6.26□□□□□ -1.41
SPG7-209ENST00000564047 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
SPG7-209ENST00000564047 M0R2T5 61 aa6.25□□□□□ -1.41
SPG7-209ENST00000564047 SSPOA2VEC9 5147 aa6.24□□□□□ -1.41
SPG7-209ENST00000564047 USH2AO75445 5202 aa6.22□□□□□ -1.41
SPG7-209ENST00000564047 PMAIP1Q13794 54 aa6.22□□□□□ -1.41
SPG7-209ENST00000564047 MIR22HGQ0VDD5 57 aa6.21□□□□□ -1.42
SPG7-209ENST00000564047 CSAG1Q6PB30 78 aa6.21□□□□□ -1.42
SPG7-209ENST00000564047 A6NN06 94 aa6.19□□□□□ -1.42
SPG7-209ENST00000564047 FCGBPQ9Y6R7 5405 aaPredicted RBP6.14□□□□□ -1.43
SPG7-209ENST00000564047 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
SPG7-209ENST00000564047 A0A1B0GU33 70 aa6.1□□□□□ -1.43
SPG7-209ENST00000564047 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
SPG7-209ENST00000564047 H0YAA0 97 aa6.07□□□□□ -1.44
SPG7-209ENST00000564047 KRTAP9-8Q9BYQ0 159 aa6.07□□□□□ -1.44
SPG7-209ENST00000564047 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
SPG7-209ENST00000564047 MT2AP02795 61 aa6.02□□□□□ -1.45
SPG7-209ENST00000564047 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
SPG7-209ENST00000564047 MT1FP04733 61 aa5.98□□□□□ -1.45
SPG7-209ENST00000564047 KRTAP10-10P60014 251 aa5.97□□□□□ -1.45
SPG7-209ENST00000564047 KRTAP19-1Q8IUB9 90 aa5.96□□□□□ -1.46
SPG7-209ENST00000564047 P0C880 135 aa5.92□□□□□ -1.46
SPG7-209ENST00000564047 K7ERS5 55 aa5.9□□□□□ -1.46
SPG7-209ENST00000564047 CRIPTQ9P021 101 aa5.9□□□□□ -1.46
SPG7-209ENST00000564047 KRTAP9-3Q9BYQ3 159 aa5.86□□□□□ -1.47
SPG7-209ENST00000564047 KRTAP13-4Q3LI77 160 aa5.84□□□□□ -1.47
SPG7-209ENST00000564047 SPRR2GQ9BYE4 73 aa5.81□□□□□ -1.48
SPG7-209ENST00000564047 M0QZ58 72 aa5.8□□□□□ -1.48
SPG7-209ENST00000564047 R4GN34 69 aa5.8□□□□□ -1.48
SPG7-209ENST00000564047 KRTAP6-3Q3LI67 103 aa5.79□□□□□ -1.48
SPG7-209ENST00000564047 PRAC1Q96KF2 57 aa5.77□□□□□ -1.49
SPG7-209ENST00000564047 A0A0D9SG42 100 aa5.73□□□□□ -1.49
SPG7-209ENST00000564047 NEBP20929 6669 aa5.72□□□□□ -1.49
SPG7-209ENST00000564047 KRTAP19-6Q3LI70 58 aa5.72□□□□□ -1.49
SPG7-209ENST00000564047 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
SPG7-209ENST00000564047 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
SPG7-209ENST00000564047 ROMO1P60602 79 aa5.69□□□□□ -1.5
SPG7-209ENST00000564047 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
SPG7-209ENST00000564047 LINC01554Q52M75 96 aa5.66□□□□□ -1.5
SPG7-209ENST00000564047 KRTAP12-2P59991 146 aa5.64□□□□□ -1.51
SPG7-209ENST00000564047 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
SPG7-209ENST00000564047 MT1BP07438 61 aa5.62□□□□□ -1.51
SPG7-209ENST00000564047 KRTAP25-1Q3LHN0 102 aa5.62□□□□□ -1.51
SPG7-209ENST00000564047 SPINT4Q6UDR6 99 aa5.6□□□□□ -1.51
SPG7-209ENST00000564047 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
SPG7-209ENST00000564047 LOC100996750A0A140TA64 210 aa5.52□□□□□ -1.53
SPG7-209ENST00000564047 KRTAP4-6Q9BYQ5 205 aa5.52□□□□□ -1.53
SPG7-209ENST00000564047 H3BS24 57 aa5.47□□□□□ -1.53
SPG7-209ENST00000564047 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
SPG7-209ENST00000564047 CAMK2N1Q7Z7J9 78 aa5.41□□□□□ -1.54
SPG7-209ENST00000564047 KRTAP10-5P60370 271 aa5.39□□□□□ -1.55
SPG7-209ENST00000564047 KMT2DO14686 5537 aa5.38□□□□□ -1.55
SPG7-209ENST00000564047 MT1XP80297 61 aa5.38□□□□□ -1.55
SPG7-209ENST00000564047 PRO2289Q9P1D8 64 aa5.38□□□□□ -1.55
SPG7-209ENST00000564047 KRTAP2-3P0C7H8 128 aa5.34□□□□□ -1.55
SPG7-209ENST00000564047 KRTAP2-4Q9BYR9 128 aa5.34□□□□□ -1.55
SPG7-209ENST00000564047 C10orf95Q9H7T3 257 aa5.34□□□□□ -1.55
SPG7-209ENST00000564047 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
SPG7-209ENST00000564047 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
SPG7-209ENST00000564047 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
SPG7-209ENST00000564047 KRTAP23-1A1A580 65 aa5.15□□□□□ -1.59
SPG7-209ENST00000564047 TNP1P09430 55 aa5.14□□□□□ -1.59
SPG7-209ENST00000564047 KRTAP10-7P60409 375 aaPredicted RBP5.14□□□□□ -1.59
SPG7-209ENST00000564047 KRTAP2-2Q9BYT5 123 aa5.14□□□□□ -1.59
SPG7-209ENST00000564047 KRTAP2-1Q9BYU5 128 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms