RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 PCP4L1A6NKN8 68 aa9.07□□□□□ -0.96
CHD9-208ENST00000563410 IMUPQ9GZP8 106 aa9.05□□□□□ -0.96
CHD9-208ENST00000563410 TRAV22A0A0B4J277 110 aa9□□□□□ -0.97
CHD9-208ENST00000563410 LOC101927531A0A1B0GV80 90 aa8.99□□□□□ -0.97
CHD9-208ENST00000563410 GTF2H5Q6ZYL4 71 aa8.98□□□□□ -0.97
CHD9-208ENST00000563410 H0YAA0 97 aa8.95□□□□□ -0.98
CHD9-208ENST00000563410 ETDBQ3ZM63 59 aa8.95□□□□□ -0.98
CHD9-208ENST00000563410 F8W1H4 67 aa8.92□□□□□ -0.98
CHD9-208ENST00000563410 NDUFC1O43677 76 aa8.9□□□□□ -0.98
CHD9-208ENST00000563410 KRTAP2-3P0C7H8 128 aa8.84□□□□□ -0.99
CHD9-208ENST00000563410 KRTAP2-4Q9BYR9 128 aa8.84□□□□□ -0.99
CHD9-208ENST00000563410 MT1XP80297 61 aa8.83□□□□□ -1
CHD9-208ENST00000563410 ADM2Q7Z4H4 148 aa8.83□□□□□ -1
CHD9-208ENST00000563410 SPRR2FQ96RM1 72 aa8.83□□□□□ -1
CHD9-208ENST00000563410 A8MUN3 132 aa8.82□□□□□ -1
CHD9-208ENST00000563410 H0Y9P7 68 aa8.82□□□□□ -1
CHD9-208ENST00000563410 UQCRQO14949 82 aa8.82□□□□□ -1
CHD9-208ENST00000563410 ATOX1O00244 68 aa8.79□□□□□ -1
CHD9-208ENST00000563410 PRO2289Q9P1D8 64 aa8.79□□□□□ -1
CHD9-208ENST00000563410 ACYP1P07311 99 aa8.78□□□□□ -1
CHD9-208ENST00000563410 SPRR2EP22531 72 aa8.77□□□□□ -1.01
CHD9-208ENST00000563410 SPRR2BP35325 72 aa8.77□□□□□ -1.01
CHD9-208ENST00000563410 SPRR2AP35326 72 aa8.77□□□□□ -1.01
CHD9-208ENST00000563410 HIST1H4AP62805 103 aaKnown RBP8.75□□□□□ -1.01
CHD9-208ENST00000563410 ATP5EP2Q5VTU8 51 aa8.74□□□□□ -1.01
CHD9-208ENST00000563410 PLAC4Q8WY50 150 aa8.7□□□□□ -1.02
CHD9-208ENST00000563410 FAM240AA0A1B0GVK7 77 aa8.69□□□□□ -1.02
CHD9-208ENST00000563410 KRTAP8-1Q8IUC2 63 aa8.69□□□□□ -1.02
CHD9-208ENST00000563410 KRTAP12-2P59991 146 aa8.66□□□□□ -1.02
CHD9-208ENST00000563410 LINC00208Q96KT6 92 aa8.65□□□□□ -1.02
CHD9-208ENST00000563410 LCE1AQ5T7P2 110 aa8.64□□□□□ -1.03
CHD9-208ENST00000563410 P0C880 135 aa8.63□□□□□ -1.03
CHD9-208ENST00000563410 R4GN34 69 aa8.62□□□□□ -1.03
CHD9-208ENST00000563410 A0A1B0GV90 55 aa8.57□□□□□ -1.04
CHD9-208ENST00000563410 KRTAP4-8A0A0G2JLE6 195 aa8.56□□□□□ -1.04
CHD9-208ENST00000563410 KRTAP4-8Q9BYQ9 185 aa8.56□□□□□ -1.04
CHD9-208ENST00000563410 KRTAP2-2Q9BYT5 123 aa8.55□□□□□ -1.04
CHD9-208ENST00000563410 KRTAP2-1Q9BYU5 128 aa8.55□□□□□ -1.04
CHD9-208ENST00000563410 OCR1Q9BZK8 76 aa8.55□□□□□ -1.04
CHD9-208ENST00000563410 M0QZ58 72 aa8.54□□□□□ -1.04
CHD9-208ENST00000563410 MP68P56378 58 aa8.52□□□□□ -1.05
CHD9-208ENST00000563410 LINC00643Q86TS7 51 aa8.52□□□□□ -1.05
CHD9-208ENST00000563410 C20orf197Q8N268 126 aa8.52□□□□□ -1.05
CHD9-208ENST00000563410 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
CHD9-208ENST00000563410 SPRR2DP22532 72 aa8.47□□□□□ -1.05
CHD9-208ENST00000563410 LINC01554Q52M75 96 aa8.44□□□□□ -1.06
CHD9-208ENST00000563410 DMAC1Q96GE9 116 aa8.44□□□□□ -1.06
CHD9-208ENST00000563410 KRTAP10-7P60409 375 aaPredicted RBP8.42□□□□□ -1.06
CHD9-208ENST00000563410 H3BPC8 53 aa8.38□□□□□ -1.07
CHD9-208ENST00000563410 KRTAP10-12P60413 245 aa8.38□□□□□ -1.07
CHD9-208ENST00000563410 J3QR89 54 aa8.31□□□□□ -1.08
CHD9-208ENST00000563410 LCE3BQ5TA77 95 aa8.28□□□□□ -1.08
CHD9-208ENST00000563410 TRAV7A0A075B6U4 112 aa8.23□□□□□ -1.09
CHD9-208ENST00000563410 MT-ATP8P03928 68 aa8.18□□□□□ -1.1
CHD9-208ENST00000563410 SCGB1A1P11684 91 aa8.18□□□□□ -1.1
CHD9-208ENST00000563410 ACYP2P14621 99 aa8.15□□□□□ -1.1
CHD9-208ENST00000563410 SPTSSBQ8NFR3 76 aa8.08□□□□□ -1.12
CHD9-208ENST00000563410 K7ERU9 68 aa8.06□□□□□ -1.12
CHD9-208ENST00000563410 DSTQ03001 7570 aaKnown RBP7.98□□□□□ -1.13
CHD9-208ENST00000563410 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
CHD9-208ENST00000563410 KRTAP13-4Q3LI77 160 aa7.95□□□□□ -1.14
CHD9-208ENST00000563410 KRTAP19-7Q3SYF9 63 aa7.91□□□□□ -1.14
CHD9-208ENST00000563410 LCE5AQ5TCM9 118 aa7.9□□□□□ -1.14
CHD9-208ENST00000563410 SMIM20Q8N5G0 67 aa7.9□□□□□ -1.14
CHD9-208ENST00000563410 CAMK2N1Q7Z7J9 78 aa7.86□□□□□ -1.15
CHD9-208ENST00000563410 MT1EP04732 61 aa7.84□□□□□ -1.15
CHD9-208ENST00000563410 GPR98Q8WXG9 6306 aa7.84□□□□□ -1.15
CHD9-208ENST00000563410 KRTAP19-3Q7Z4W3 81 aa7.82□□□□□ -1.16
CHD9-208ENST00000563410 SNURFQ9Y675 71 aa7.82□□□□□ -1.16
CHD9-208ENST00000563410 KRTAP4-9Q9BYQ8 210 aa7.8□□□□□ -1.16
CHD9-208ENST00000563410 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
CHD9-208ENST00000563410 SERP2Q8N6R1 65 aa7.68□□□□□ -1.18
CHD9-208ENST00000563410 CYSTM1Q9H1C7 97 aa7.64□□□□□ -1.19
CHD9-208ENST00000563410 A0A0D9SG42 100 aa7.63□□□□□ -1.19
CHD9-208ENST00000563410 KRTAP19-5Q3LI72 72 aa7.61□□□□□ -1.19
CHD9-208ENST00000563410 MT1GP13640 62 aa7.6□□□□□ -1.19
CHD9-208ENST00000563410 LCE1DQ5T752 114 aa7.58□□□□□ -1.2
CHD9-208ENST00000563410 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
CHD9-208ENST00000563410 COA5Q86WW8 74 aa7.56□□□□□ -1.2
CHD9-208ENST00000563410 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
CHD9-208ENST00000563410 SEC61GP60059 68 aa7.5□□□□□ -1.21
CHD9-208ENST00000563410 PP632Q6XCG6 107 aa7.5□□□□□ -1.21
CHD9-208ENST00000563410 SERP1Q9Y6X1 66 aa7.5□□□□□ -1.21
CHD9-208ENST00000563410 HMCN1Q96RW7 5635 aa7.49□□□□□ -1.21
CHD9-208ENST00000563410 KRTAP12-1P59990 96 aa7.48□□□□□ -1.21
CHD9-208ENST00000563410 LCE4AQ5TA78 99 aa7.48□□□□□ -1.21
CHD9-208ENST00000563410 MT1MQ8N339 61 aa7.48□□□□□ -1.21
CHD9-208ENST00000563410 COX7CP15954 63 aa7.47□□□□□ -1.21
CHD9-208ENST00000563410 A0A1B0GU33 70 aa7.45□□□□□ -1.22
CHD9-208ENST00000563410 MT4P47944 62 aa7.44□□□□□ -1.22
CHD9-208ENST00000563410 MT1LQ93083 61 aa7.44□□□□□ -1.22
CHD9-208ENST00000563410 H7BZZ5 65 aa7.34□□□□□ -1.23
CHD9-208ENST00000563410 KRTAP4-3Q9BYR4 195 aa7.34□□□□□ -1.23
CHD9-208ENST00000563410 AHNAK2Q8IVF2 5795 aa7.33□□□□□ -1.24
CHD9-208ENST00000563410 KRTAP5-4Q6L8H1 288 aa7.32□□□□□ -1.24
CHD9-208ENST00000563410 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
CHD9-208ENST00000563410 C10orf95Q9H7T3 257 aa7.29□□□□□ -1.24
CHD9-208ENST00000563410 ANAPC13Q9BS18 74 aa7.28□□□□□ -1.24
CHD9-208ENST00000563410 KRTAP4-6Q9BYQ5 205 aa7.24□□□□□ -1.25
CHD9-208ENST00000563410 SMIM26A0A096LP01 95 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms