RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 XP32Q5T750 250 aa7.71□□□□□ -1.18
RABGGTA-209ENST00000559551 C7orf65Q6ZTY9 151 aa7.69□□□□□ -1.18
RABGGTA-209ENST00000559551 RBM12B-AS1Q9P1G2 102 aa7.69□□□□□ -1.18
RABGGTA-209ENST00000559551 TPRXLQ17RH7 258 aa7.69□□□□□ -1.18
RABGGTA-209ENST00000559551 SPINK7P58062 85 aa7.65□□□□□ -1.18
RABGGTA-209ENST00000559551 RPL37P61927 97 aaKnown RBP7.62□□□□□ -1.19
RABGGTA-209ENST00000559551 ACYP2P14621 99 aa7.61□□□□□ -1.19
RABGGTA-209ENST00000559551 IGKV2-30P06310 120 aa7.54□□□□□ -1.2
RABGGTA-209ENST00000559551 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
RABGGTA-209ENST00000559551 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
RABGGTA-209ENST00000559551 RNF213Q63HN8 5207 aa7.5□□□□□ -1.21
RABGGTA-209ENST00000559551 MUC17Q685J3 4493 aa7.49□□□□□ -1.21
RABGGTA-209ENST00000559551 A0A1B0GU69 56 aa7.47□□□□□ -1.21
RABGGTA-209ENST00000559551 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
RABGGTA-209ENST00000559551 KRTAP4-1Q9BYQ7 146 aa7.42□□□□□ -1.22
RABGGTA-209ENST00000559551 UQCR11O14957 56 aa7.39□□□□□ -1.23
RABGGTA-209ENST00000559551 MIR22HGQ0VDD5 57 aa7.38□□□□□ -1.23
RABGGTA-209ENST00000559551 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
RABGGTA-209ENST00000559551 PRAC1Q96KF2 57 aa7.35□□□□□ -1.23
RABGGTA-209ENST00000559551 KRTAP3-1Q9BYR8 98 aa7.31□□□□□ -1.24
RABGGTA-209ENST00000559551 MUC2Q02817 5179 aa7.3□□□□□ -1.24
RABGGTA-209ENST00000559551 LINC01554Q52M75 96 aa7.29□□□□□ -1.24
RABGGTA-209ENST00000559551 ADM2Q7Z4H4 148 aa7.28□□□□□ -1.24
RABGGTA-209ENST00000559551 COX6B2Q6YFQ2 88 aa7.24□□□□□ -1.25
RABGGTA-209ENST00000559551 KRTAP19-2Q3LHN2 52 aa7.21□□□□□ -1.26
RABGGTA-209ENST00000559551 CSAG1Q6PB30 78 aa7.15□□□□□ -1.27
RABGGTA-209ENST00000559551 FAT4Q6V0I7 4981 aa7.07□□□□□ -1.28
RABGGTA-209ENST00000559551 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
RABGGTA-209ENST00000559551 FLGP20930 4061 aaPredicted RBP7.07□□□□□ -1.28
RABGGTA-209ENST00000559551 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
RABGGTA-209ENST00000559551 KRTAP3-3Q9BYR6 98 aa7.05□□□□□ -1.28
RABGGTA-209ENST00000559551 H0YAA0 97 aa7.02□□□□□ -1.29
RABGGTA-209ENST00000559551 A0A1B0GU33 70 aa6.99□□□□□ -1.29
RABGGTA-209ENST00000559551 S4R3F8 94 aa6.99□□□□□ -1.29
RABGGTA-209ENST00000559551 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
RABGGTA-209ENST00000559551 H3BS24 57 aa6.92□□□□□ -1.3
RABGGTA-209ENST00000559551 K7ERS5 55 aa6.91□□□□□ -1.3
RABGGTA-209ENST00000559551 LCE2AQ5TA79 106 aaPredicted RBP6.88□□□□□ -1.31
RABGGTA-209ENST00000559551 MT1HP80294 61 aa6.87□□□□□ -1.31
RABGGTA-209ENST00000559551 ROMO1P60602 79 aa6.83□□□□□ -1.32
RABGGTA-209ENST00000559551 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
RABGGTA-209ENST00000559551 KRTAP10-6P60371 365 aaPredicted RBP6.75□□□□□ -1.33
RABGGTA-209ENST00000559551 KRTAP9-2Q9BYQ4 174 aa6.72□□□□□ -1.33
RABGGTA-209ENST00000559551 P0C880 135 aa6.71□□□□□ -1.34
RABGGTA-209ENST00000559551 M0R2T5 61 aa6.69□□□□□ -1.34
RABGGTA-209ENST00000559551 CRIPTQ9P021 101 aa6.65□□□□□ -1.34
RABGGTA-209ENST00000559551 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
RABGGTA-209ENST00000559551 KRTAP9-8Q9BYQ0 159 aa6.62□□□□□ -1.35
RABGGTA-209ENST00000559551 MT2AP02795 61 aa6.59□□□□□ -1.35
RABGGTA-209ENST00000559551 KRTAP13-4Q3LI77 160 aa6.57□□□□□ -1.36
RABGGTA-209ENST00000559551 A0A0D9SG42 100 aa6.56□□□□□ -1.36
RABGGTA-209ENST00000559551 MT1FP04733 61 aa6.56□□□□□ -1.36
RABGGTA-209ENST00000559551 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
RABGGTA-209ENST00000559551 SPINT4Q6UDR6 99 aa6.53□□□□□ -1.36
RABGGTA-209ENST00000559551 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
RABGGTA-209ENST00000559551 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
RABGGTA-209ENST00000559551 LCE2DQ5TA82 110 aaPredicted RBP6.45□□□□□ -1.38
RABGGTA-209ENST00000559551 M0QZ58 72 aa6.43□□□□□ -1.38
RABGGTA-209ENST00000559551 R4GN34 69 aa6.42□□□□□ -1.38
RABGGTA-209ENST00000559551 KRTAP19-1Q8IUB9 90 aa6.41□□□□□ -1.38
RABGGTA-209ENST00000559551 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
RABGGTA-209ENST00000559551 KRTAP12-2P59991 146 aa6.4□□□□□ -1.38
RABGGTA-209ENST00000559551 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.39
RABGGTA-209ENST00000559551 KRTAP9-3Q9BYQ3 159 aa6.38□□□□□ -1.39
RABGGTA-209ENST00000559551 KRTAP12-1P59990 96 aa6.37□□□□□ -1.39
RABGGTA-209ENST00000559551 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
RABGGTA-209ENST00000559551 CRCT1Q9UGL9 99 aa6.32□□□□□ -1.4
RABGGTA-209ENST00000559551 NDUFAF8A1L188 74 aa6.3□□□□□ -1.4
RABGGTA-209ENST00000559551 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
RABGGTA-209ENST00000559551 LCE2BO14633 110 aa6.25□□□□□ -1.41
RABGGTA-209ENST00000559551 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
RABGGTA-209ENST00000559551 MT1BP07438 61 aa6.2□□□□□ -1.42
RABGGTA-209ENST00000559551 USH2AO75445 5202 aa6.19□□□□□ -1.42
RABGGTA-209ENST00000559551 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
RABGGTA-209ENST00000559551 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
RABGGTA-209ENST00000559551 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
RABGGTA-209ENST00000559551 FCGBPQ9Y6R7 5405 aaPredicted RBP5.97□□□□□ -1.45
RABGGTA-209ENST00000559551 MT1XP80297 61 aa5.97□□□□□ -1.45
RABGGTA-209ENST00000559551 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
RABGGTA-209ENST00000559551 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
RABGGTA-209ENST00000559551 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
RABGGTA-209ENST00000559551 LUZP6Q538Z0 58 aa5.85□□□□□ -1.47
RABGGTA-209ENST00000559551 MACF1Q9UPN3 7388 aaKnown RBP5.84□□□□□ -1.47
RABGGTA-209ENST00000559551 KRTAP9-7A8MTY7 169 aa5.83□□□□□ -1.48
RABGGTA-209ENST00000559551 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
RABGGTA-209ENST00000559551 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
RABGGTA-209ENST00000559551 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
RABGGTA-209ENST00000559551 KRTAP10-7P60409 375 aaPredicted RBP5.73□□□□□ -1.49
RABGGTA-209ENST00000559551 KRTAP23-1A1A580 65 aa5.71□□□□□ -1.49
RABGGTA-209ENST00000559551 TNP1P09430 55 aa5.68□□□□□ -1.5
RABGGTA-209ENST00000559551 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
RABGGTA-209ENST00000559551 KMT2DO14686 5537 aa5.61□□□□□ -1.51
RABGGTA-209ENST00000559551 SPRR5A0A1B0GTR4 108 aa5.59□□□□□ -1.51
RABGGTA-209ENST00000559551 LCE3AQ5TA76 89 aa5.56□□□□□ -1.52
RABGGTA-209ENST00000559551 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
RABGGTA-209ENST00000559551 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
RABGGTA-209ENST00000559551 KRTAP6-3Q3LI67 103 aa5.46□□□□□ -1.53
RABGGTA-209ENST00000559551 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
RABGGTA-209ENST00000559551 NEBP20929 6669 aa5.43□□□□□ -1.54
RABGGTA-209ENST00000559551 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms