RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 LOC101927531A0A1B0GV80 90 aa7.63□□□□□ -1.19
LRRC28-210ENST00000558879 KRTAP6-3Q3LI67 103 aa7.63□□□□□ -1.19
LRRC28-210ENST00000558879 KLKP1Q107X0 134 aa7.62□□□□□ -1.19
LRRC28-210ENST00000558879 Q5VV11 94 aa7.62□□□□□ -1.19
LRRC28-210ENST00000558879 A0A087WVE0 104 aa7.59□□□□□ -1.19
LRRC28-210ENST00000558879 A6NN06 94 aa7.56□□□□□ -1.2
LRRC28-210ENST00000558879 SVIPQ8NHG7 77 aa7.56□□□□□ -1.2
LRRC28-210ENST00000558879 K7ERU9 68 aa7.54□□□□□ -1.2
LRRC28-210ENST00000558879 UQCRQO14949 82 aa7.54□□□□□ -1.2
LRRC28-210ENST00000558879 H0Y9P7 68 aa7.52□□□□□ -1.21
LRRC28-210ENST00000558879 ATOX1O00244 68 aa7.52□□□□□ -1.21
LRRC28-210ENST00000558879 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
LRRC28-210ENST00000558879 CRIPTQ9P021 101 aa7.49□□□□□ -1.21
LRRC28-210ENST00000558879 H0YAA0 97 aa7.46□□□□□ -1.22
LRRC28-210ENST00000558879 SCGB1A1P11684 91 aa7.45□□□□□ -1.22
LRRC28-210ENST00000558879 IMUPQ9GZP8 106 aa7.45□□□□□ -1.22
LRRC28-210ENST00000558879 MP68P56378 58 aa7.43□□□□□ -1.22
LRRC28-210ENST00000558879 A8MUN3 132 aa7.42□□□□□ -1.22
LRRC28-210ENST00000558879 NDUFC1O43677 76 aa7.42□□□□□ -1.22
LRRC28-210ENST00000558879 OCR1Q9BZK8 76 aa7.38□□□□□ -1.23
LRRC28-210ENST00000558879 LINC00208Q96KT6 92 aa7.37□□□□□ -1.23
LRRC28-210ENST00000558879 H3BPC8 53 aa7.34□□□□□ -1.23
LRRC28-210ENST00000558879 SMIM20Q8N5G0 67 aa7.32□□□□□ -1.24
LRRC28-210ENST00000558879 KRTAP5-9P26371 169 aa7.31□□□□□ -1.24
LRRC28-210ENST00000558879 MT-ATP8P03928 68 aa7.3□□□□□ -1.24
LRRC28-210ENST00000558879 ADM2Q7Z4H4 148 aa7.3□□□□□ -1.24
LRRC28-210ENST00000558879 MUC12Q9UKN1 5478 aa7.29□□□□□ -1.24
LRRC28-210ENST00000558879 NEBP20929 6669 aa7.27□□□□□ -1.25
LRRC28-210ENST00000558879 TRAV7A0A075B6U4 112 aa7.21□□□□□ -1.26
LRRC28-210ENST00000558879 DMAC1Q96GE9 116 aa7.21□□□□□ -1.26
LRRC28-210ENST00000558879 MT1XP80297 61 aa7.18□□□□□ -1.26
LRRC28-210ENST00000558879 P0C880 135 aa7.17□□□□□ -1.26
LRRC28-210ENST00000558879 KMT2DO14686 5537 aa7.14□□□□□ -1.27
LRRC28-210ENST00000558879 PRO2289Q9P1D8 64 aa7.14□□□□□ -1.27
LRRC28-210ENST00000558879 R4GN34 69 aa7.13□□□□□ -1.27
LRRC28-210ENST00000558879 C20orf197Q8N268 126 aa7.12□□□□□ -1.27
LRRC28-210ENST00000558879 PLAC4Q8WY50 150 aa7.09□□□□□ -1.27
LRRC28-210ENST00000558879 MDN1Q9NU22 5596 aa7.07□□□□□ -1.28
LRRC28-210ENST00000558879 M0QZ58 72 aa7.07□□□□□ -1.28
LRRC28-210ENST00000558879 KRTAP20-1Q3LI63 56 aa7.07□□□□□ -1.28
LRRC28-210ENST00000558879 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
LRRC28-210ENST00000558879 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
LRRC28-210ENST00000558879 ACYP2P14621 99 aa7.01□□□□□ -1.29
LRRC28-210ENST00000558879 SPRR2FQ96RM1 72 aa7□□□□□ -1.29
LRRC28-210ENST00000558879 SNURFQ9Y675 71 aa6.98□□□□□ -1.29
LRRC28-210ENST00000558879 SPTSSBQ8NFR3 76 aa6.97□□□□□ -1.29
LRRC28-210ENST00000558879 KRTAP8-1Q8IUC2 63 aa6.95□□□□□ -1.3
LRRC28-210ENST00000558879 LINC01554Q52M75 96 aa6.93□□□□□ -1.3
LRRC28-210ENST00000558879 CHKB-CPT1BH3BT56 60 aa6.92□□□□□ -1.3
LRRC28-210ENST00000558879 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
LRRC28-210ENST00000558879 SPRR2EP22531 72 aa6.91□□□□□ -1.3
LRRC28-210ENST00000558879 SPRR2BP35325 72 aa6.91□□□□□ -1.3
LRRC28-210ENST00000558879 SPRR2AP35326 72 aa6.91□□□□□ -1.3
LRRC28-210ENST00000558879 COX7CP15954 63 aa6.89□□□□□ -1.31
LRRC28-210ENST00000558879 KRTAP2-3P0C7H8 128 aa6.87□□□□□ -1.31
LRRC28-210ENST00000558879 KRTAP2-4Q9BYR9 128 aa6.87□□□□□ -1.31
LRRC28-210ENST00000558879 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
LRRC28-210ENST00000558879 KRTAP4-8Q9BYQ9 185 aa6.86□□□□□ -1.31
LRRC28-210ENST00000558879 LCE1AQ5T7P2 110 aa6.85□□□□□ -1.31
LRRC28-210ENST00000558879 KRTAP10-7P60409 375 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-210ENST00000558879 KRTAP10-12P60413 245 aa6.82□□□□□ -1.32
LRRC28-210ENST00000558879 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
LRRC28-210ENST00000558879 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
LRRC28-210ENST00000558879 SPRR2DP22532 72 aa6.68□□□□□ -1.34
LRRC28-210ENST00000558879 COA5Q86WW8 74 aa6.68□□□□□ -1.34
LRRC28-210ENST00000558879 H7BZZ5 65 aa6.67□□□□□ -1.34
LRRC28-210ENST00000558879 KRTAP2-2Q9BYT5 123 aa6.65□□□□□ -1.34
LRRC28-210ENST00000558879 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.34
LRRC28-210ENST00000558879 SEC61GP60059 68 aa6.64□□□□□ -1.35
LRRC28-210ENST00000558879 PCP4P48539 62 aa6.59□□□□□ -1.35
LRRC28-210ENST00000558879 SERP1Q9Y6X1 66 aa6.59□□□□□ -1.35
LRRC28-210ENST00000558879 ATP5EP56381 51 aaPredicted RBP6.58□□□□□ -1.36
LRRC28-210ENST00000558879 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
LRRC28-210ENST00000558879 CCDC179H3BU77 68 aa6.56□□□□□ -1.36
LRRC28-210ENST00000558879 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
LRRC28-210ENST00000558879 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
LRRC28-210ENST00000558879 KRTAP23-1A1A580 65 aa6.48□□□□□ -1.37
LRRC28-210ENST00000558879 TMEM258P61165 79 aa6.45□□□□□ -1.38
LRRC28-210ENST00000558879 KRTAP19-7Q3SYF9 63 aa6.43□□□□□ -1.38
LRRC28-210ENST00000558879 A0A1B0GU69 56 aa6.41□□□□□ -1.38
LRRC28-210ENST00000558879 A0A0D9SG42 100 aa6.39□□□□□ -1.39
LRRC28-210ENST00000558879 SPATA8Q6RVD6 105 aa6.39□□□□□ -1.39
LRRC28-210ENST00000558879 A0A1B0GU33 70 aa6.38□□□□□ -1.39
LRRC28-210ENST00000558879 PRR15LQ9BU68 103 aa6.38□□□□□ -1.39
LRRC28-210ENST00000558879 MT1EP04732 61 aa6.37□□□□□ -1.39
LRRC28-210ENST00000558879 LCE5AQ5TCM9 118 aa6.37□□□□□ -1.39
LRRC28-210ENST00000558879 KRTAP12-1P59990 96 aa6.33□□□□□ -1.4
LRRC28-210ENST00000558879 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
LRRC28-210ENST00000558879 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
LRRC28-210ENST00000558879 SMIM26A0A096LP01 95 aa6.26□□□□□ -1.41
LRRC28-210ENST00000558879 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
LRRC28-210ENST00000558879 LINC01558Q9Y6Z2 57 aa6.22□□□□□ -1.41
LRRC28-210ENST00000558879 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
LRRC28-210ENST00000558879 KRTAP19-4Q3LI73 84 aa6.2□□□□□ -1.42
LRRC28-210ENST00000558879 A0A0A0MQY5 61 aa6.16□□□□□ -1.42
LRRC28-210ENST00000558879 V9GYY9 64 aa6.15□□□□□ -1.42
LRRC28-210ENST00000558879 A8MU10 97 aa6.14□□□□□ -1.43
LRRC28-210ENST00000558879 MT1GP13640 62 aa6.14□□□□□ -1.43
LRRC28-210ENST00000558879 UQCR11O14957 56 aa6.1□□□□□ -1.43
LRRC28-210ENST00000558879 PP632Q6XCG6 107 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms