RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 TAX1BP3O14907 124 aa7.62□□□□□ -1.19
TSPAN3-204ENST00000558394 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
TSPAN3-204ENST00000558394 CXCL6P80162 114 aa7.61□□□□□ -1.19
TSPAN3-204ENST00000558394 SPCS1Q9Y6A9 102 aa7.54□□□□□ -1.2
TSPAN3-204ENST00000558394 UBL5Q9BZL1 73 aa7.51□□□□□ -1.21
TSPAN3-204ENST00000558394 KRTAP3-3Q9BYR6 98 aa7.49□□□□□ -1.21
TSPAN3-204ENST00000558394 GPR98Q8WXG9 6306 aa7.46□□□□□ -1.21
TSPAN3-204ENST00000558394 LCE3BQ5TA77 95 aa7.46□□□□□ -1.22
TSPAN3-204ENST00000558394 MT1XP80297 61 aa7.44□□□□□ -1.22
TSPAN3-204ENST00000558394 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
TSPAN3-204ENST00000558394 PRO0461Q9UI25 63 aa7.42□□□□□ -1.22
TSPAN3-204ENST00000558394 A8MUN3 132 aa7.4□□□□□ -1.22
TSPAN3-204ENST00000558394 KRTAP12-2P59991 146 aa7.4□□□□□ -1.22
TSPAN3-204ENST00000558394 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
TSPAN3-204ENST00000558394 TP53AIP1Q9HCN2 124 aa7.39□□□□□ -1.23
TSPAN3-204ENST00000558394 K7EP34 96 aa7.37□□□□□ -1.23
TSPAN3-204ENST00000558394 COL5A1-AS1Q5SY13 56 aa7.35□□□□□ -1.23
TSPAN3-204ENST00000558394 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
TSPAN3-204ENST00000558394 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
TSPAN3-204ENST00000558394 A0A087WVE0 104 aa7.31□□□□□ -1.24
TSPAN3-204ENST00000558394 H0YAA0 97 aa7.31□□□□□ -1.24
TSPAN3-204ENST00000558394 NDUFC1O43677 76 aa7.3□□□□□ -1.24
TSPAN3-204ENST00000558394 ADM2Q7Z4H4 148 aa7.27□□□□□ -1.25
TSPAN3-204ENST00000558394 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
TSPAN3-204ENST00000558394 TRAV22A0A0B4J277 110 aa7.24□□□□□ -1.25
TSPAN3-204ENST00000558394 GTF2H5Q6ZYL4 71 aa7.24□□□□□ -1.25
TSPAN3-204ENST00000558394 DSTQ03001 7570 aaKnown RBP7.23□□□□□ -1.25
TSPAN3-204ENST00000558394 LOC101927531A0A1B0GV80 90 aa7.22□□□□□ -1.25
TSPAN3-204ENST00000558394 ETDBQ3ZM63 59 aa7.21□□□□□ -1.26
TSPAN3-204ENST00000558394 F8W1H4 67 aa7.2□□□□□ -1.26
TSPAN3-204ENST00000558394 R4GN34 69 aa7.17□□□□□ -1.26
TSPAN3-204ENST00000558394 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
TSPAN3-204ENST00000558394 ATP5EP2Q5VTU8 51 aa7.1□□□□□ -1.27
TSPAN3-204ENST00000558394 H0Y9P7 68 aa7.09□□□□□ -1.27
TSPAN3-204ENST00000558394 ATOX1O00244 68 aa7.09□□□□□ -1.27
TSPAN3-204ENST00000558394 UQCRQO14949 82 aa7.09□□□□□ -1.27
TSPAN3-204ENST00000558394 KRTAP4-9Q9BYQ8 210 aa7.09□□□□□ -1.27
TSPAN3-204ENST00000558394 ACYP1P07311 99 aa7.08□□□□□ -1.28
TSPAN3-204ENST00000558394 M0QZ58 72 aa7.07□□□□□ -1.28
TSPAN3-204ENST00000558394 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
TSPAN3-204ENST00000558394 HIST1H4AP62805 103 aaKnown RBP7.07□□□□□ -1.28
TSPAN3-204ENST00000558394 C20orf197Q8N268 126 aa7.06□□□□□ -1.28
TSPAN3-204ENST00000558394 FAM240AA0A1B0GVK7 77 aa7.04□□□□□ -1.28
TSPAN3-204ENST00000558394 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
TSPAN3-204ENST00000558394 PCP4L1A6NKN8 68 aa7.01□□□□□ -1.29
TSPAN3-204ENST00000558394 P0C880 135 aa6.97□□□□□ -1.29
TSPAN3-204ENST00000558394 LINC00208Q96KT6 92 aa6.94□□□□□ -1.3
TSPAN3-204ENST00000558394 MP68P56378 58 aa6.89□□□□□ -1.31
TSPAN3-204ENST00000558394 LINC00643Q86TS7 51 aa6.89□□□□□ -1.31
TSPAN3-204ENST00000558394 OCR1Q9BZK8 76 aa6.86□□□□□ -1.31
TSPAN3-204ENST00000558394 LCE1DQ5T752 114 aa6.83□□□□□ -1.32
TSPAN3-204ENST00000558394 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
TSPAN3-204ENST00000558394 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
TSPAN3-204ENST00000558394 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
TSPAN3-204ENST00000558394 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
TSPAN3-204ENST00000558394 H3BPC8 53 aa6.75□□□□□ -1.33
TSPAN3-204ENST00000558394 KRTAP19-3Q7Z4W3 81 aa6.73□□□□□ -1.33
TSPAN3-204ENST00000558394 MT4P47944 62 aa6.72□□□□□ -1.33
TSPAN3-204ENST00000558394 LCE4AQ5TA78 99 aa6.69□□□□□ -1.34
TSPAN3-204ENST00000558394 HMCN1Q96RW7 5635 aa6.69□□□□□ -1.34
TSPAN3-204ENST00000558394 CYSTM1Q9H1C7 97 aa6.67□□□□□ -1.34
TSPAN3-204ENST00000558394 MT1EP04732 61 aa6.65□□□□□ -1.34
TSPAN3-204ENST00000558394 KRTAP19-7Q3SYF9 63 aa6.65□□□□□ -1.34
TSPAN3-204ENST00000558394 AHNAK2Q8IVF2 5795 aa6.64□□□□□ -1.35
TSPAN3-204ENST00000558394 SCGB1A1P11684 91 aa6.64□□□□□ -1.35
TSPAN3-204ENST00000558394 KRTAP5-10Q6L8G5 202 aa6.62□□□□□ -1.35
TSPAN3-204ENST00000558394 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
TSPAN3-204ENST00000558394 A0A1B0GV90 55 aa6.6□□□□□ -1.35
TSPAN3-204ENST00000558394 J3QR89 54 aa6.58□□□□□ -1.36
TSPAN3-204ENST00000558394 ACYP2P14621 99 aa6.54□□□□□ -1.36
TSPAN3-204ENST00000558394 MT1GP13640 62 aa6.53□□□□□ -1.36
TSPAN3-204ENST00000558394 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
TSPAN3-204ENST00000558394 CAMK2N1Q7Z7J9 78 aa6.53□□□□□ -1.36
TSPAN3-204ENST00000558394 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
TSPAN3-204ENST00000558394 CHKB-CPT1BH3BT56 60 aa6.46□□□□□ -1.38
TSPAN3-204ENST00000558394 KRTAP5-7Q6L8G8 165 aa6.46□□□□□ -1.38
TSPAN3-204ENST00000558394 SMIM20Q8N5G0 67 aa6.41□□□□□ -1.38
TSPAN3-204ENST00000558394 KRTAP4-6Q9BYQ5 205 aa6.41□□□□□ -1.38
TSPAN3-204ENST00000558394 KRTAP5-4Q6L8H1 288 aa6.39□□□□□ -1.39
TSPAN3-204ENST00000558394 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
TSPAN3-204ENST00000558394 MT1MQ8N339 61 aa6.37□□□□□ -1.39
TSPAN3-204ENST00000558394 KRTAP5-3Q6L8H2 238 aa6.35□□□□□ -1.39
TSPAN3-204ENST00000558394 A0A0D9SG42 100 aa6.34□□□□□ -1.39
TSPAN3-204ENST00000558394 SNURFQ9Y675 71 aa6.32□□□□□ -1.4
TSPAN3-204ENST00000558394 SPRR5A0A1B0GTR4 108 aa6.31□□□□□ -1.4
TSPAN3-204ENST00000558394 KRTAP13-4Q3LI77 160 aa6.31□□□□□ -1.4
TSPAN3-204ENST00000558394 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
TSPAN3-204ENST00000558394 MT1LQ93083 61 aa6.25□□□□□ -1.41
TSPAN3-204ENST00000558394 K7ERU9 68 aa6.23□□□□□ -1.41
TSPAN3-204ENST00000558394 KRTAP4-3Q9BYR4 195 aa6.23□□□□□ -1.41
TSPAN3-204ENST00000558394 KRTAP20-2Q3LI61 65 aa6.11□□□□□ -1.43
TSPAN3-204ENST00000558394 COA5Q86WW8 74 aa6.11□□□□□ -1.43
TSPAN3-204ENST00000558394 SERP2Q8N6R1 65 aa6.11□□□□□ -1.43
TSPAN3-204ENST00000558394 SEC61GP60059 68 aa6.08□□□□□ -1.44
TSPAN3-204ENST00000558394 SERP1Q9Y6X1 66 aa6.07□□□□□ -1.44
TSPAN3-204ENST00000558394 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
TSPAN3-204ENST00000558394 SPATA8Q6RVD6 105 aa6.04□□□□□ -1.44
TSPAN3-204ENST00000558394 C10orf95Q9H7T3 257 aa6.01□□□□□ -1.45
TSPAN3-204ENST00000558394 A0A1B0GU33 70 aa5.98□□□□□ -1.45
TSPAN3-204ENST00000558394 KRTAP12-4P60329 112 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms