RNA–Protein interactions for RNA: ENST00000557597.5

NUMB-229, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NUMB, Length 3,547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-229ENST00000557597 KRTAP25-1Q3LHN0 102 aa3.91□□□□□ -1.78
NUMB-229ENST00000557597 SPACA4Q8TDM5 124 aa3.9□□□□□ -1.79
NUMB-229ENST00000557597 FAT1Q14517 4588 aa3.88□□□□□ -1.79
NUMB-229ENST00000557597 SSBP3-AS1Q7Z2R9 100 aa3.88□□□□□ -1.79
NUMB-229ENST00000557597 LINC00304Q8N9R0 145 aa3.88□□□□□ -1.79
NUMB-229ENST00000557597 A8MUU9 505 aa3.87□□□□□ -1.79
NUMB-229ENST00000557597 H0YAA0 97 aa3.86□□□□□ -1.79
NUMB-229ENST00000557597 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
NUMB-229ENST00000557597 HMCN2Q8NDA2 5059 aa3.85□□□□□ -1.79
NUMB-229ENST00000557597 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.79
NUMB-229ENST00000557597 TYMSOSQ8TAI1 123 aa3.84□□□□□ -1.8
NUMB-229ENST00000557597 LCE2BO14633 110 aa3.83□□□□□ -1.8
NUMB-229ENST00000557597 A0A1B0GU33 70 aa3.83□□□□□ -1.8
NUMB-229ENST00000557597 P0C880 135 aa3.82□□□□□ -1.8
NUMB-229ENST00000557597 SPINT4Q6UDR6 99 aa3.82□□□□□ -1.8
NUMB-229ENST00000557597 K7ERS5 55 aa3.81□□□□□ -1.8
NUMB-229ENST00000557597 KRTAP16-1A8MUX0 517 aa3.8□□□□□ -1.8
NUMB-229ENST00000557597 KRTAP10-8P60410 259 aa3.78□□□□□ -1.8
NUMB-229ENST00000557597 H1FX-AS1Q4G0G2 97 aa3.78□□□□□ -1.8
NUMB-229ENST00000557597 KRTAP13-2Q52LG2 175 aa3.75□□□□□ -1.81
NUMB-229ENST00000557597 TNXBP22105 4242 aa3.75□□□□□ -1.81
NUMB-229ENST00000557597 LCE2CQ5TA81 110 aa3.75□□□□□ -1.81
NUMB-229ENST00000557597 NDUFAF8A1L188 74 aa3.74□□□□□ -1.81
NUMB-229ENST00000557597 A0A0D9SG42 100 aa3.73□□□□□ -1.81
NUMB-229ENST00000557597 LRP1Q07954 4544 aaKnown RBP3.72□□□□□ -1.81
NUMB-229ENST00000557597 COX6B2Q6YFQ2 88 aa3.7□□□□□ -1.82
NUMB-229ENST00000557597 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
NUMB-229ENST00000557597 C9orf92A6NGG3 77 aa3.7□□□□□ -1.82
NUMB-229ENST00000557597 TPRXLQ17RH7 258 aa3.67□□□□□ -1.82
NUMB-229ENST00000557597 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
NUMB-229ENST00000557597 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
NUMB-229ENST00000557597 C20orf166-AS1Q96NR2 134 aa3.67□□□□□ -1.82
NUMB-229ENST00000557597 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
NUMB-229ENST00000557597 RPL37P61927 97 aaKnown RBP3.66□□□□□ -1.82
NUMB-229ENST00000557597 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
NUMB-229ENST00000557597 RNF213Q63HN8 5207 aa3.63□□□□□ -1.83
NUMB-229ENST00000557597 KRTAP1-4P0C5Y4 121 aa3.62□□□□□ -1.83
NUMB-229ENST00000557597 KRTAP9-6A0A140TA67 174 aa3.61□□□□□ -1.83
NUMB-229ENST00000557597 SEC61BP60468 96 aaKnown RBP3.61□□□□□ -1.83
NUMB-229ENST00000557597 KRTAP15-1Q3LI76 137 aa3.6□□□□□ -1.83
NUMB-229ENST00000557597 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
NUMB-229ENST00000557597 LRP2P98164 4655 aa3.59□□□□□ -1.83
NUMB-229ENST00000557597 LORP23490 312 aaPredicted RBP3.54□□□□□ -1.84
NUMB-229ENST00000557597 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
NUMB-229ENST00000557597 KRTAP10-6P60371 365 aaPredicted RBP3.54□□□□□ -1.84
NUMB-229ENST00000557597 S4R3F8 94 aa3.53□□□□□ -1.84
NUMB-229ENST00000557597 RPS29P62273 56 aaKnown RBP3.52□□□□□ -1.85
NUMB-229ENST00000557597 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
NUMB-229ENST00000557597 LUZP6Q538Z0 58 aa3.49□□□□□ -1.85
NUMB-229ENST00000557597 FAT4Q6V0I7 4981 aa3.47□□□□□ -1.85
NUMB-229ENST00000557597 LPAP08519 4548 aa3.44□□□□□ -1.86
NUMB-229ENST00000557597 CRCT1Q9UGL9 99 aa3.44□□□□□ -1.86
NUMB-229ENST00000557597 KRTAP12-1P59990 96 aa3.43□□□□□ -1.86
NUMB-229ENST00000557597 XP32Q5T750 250 aa3.41□□□□□ -1.86
NUMB-229ENST00000557597 PLAC4Q8WY50 150 aa3.38□□□□□ -1.87
NUMB-229ENST00000557597 M0QZ58 72 aa3.32□□□□□ -1.88
NUMB-229ENST00000557597 KRTAP4-1Q9BYQ7 146 aa3.3□□□□□ -1.88
NUMB-229ENST00000557597 MT1HP80294 61 aa3.29□□□□□ -1.88
NUMB-229ENST00000557597 R4GN34 69 aa3.29□□□□□ -1.88
NUMB-229ENST00000557597 KRTAP19-2Q3LHN2 52 aa3.27□□□□□ -1.89
NUMB-229ENST00000557597 MUC2Q02817 5179 aa3.25□□□□□ -1.89
NUMB-229ENST00000557597 KRTAP23-1A1A580 65 aa3.24□□□□□ -1.89
NUMB-229ENST00000557597 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
NUMB-229ENST00000557597 M0R2T5 61 aa3.21□□□□□ -1.9
NUMB-229ENST00000557597 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.2□□□□□ -1.9
NUMB-229ENST00000557597 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
NUMB-229ENST00000557597 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
NUMB-229ENST00000557597 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.92
NUMB-229ENST00000557597 KRTAP9-8Q9BYQ0 159 aa3.08□□□□□ -1.92
NUMB-229ENST00000557597 KRTAP19-1Q8IUB9 90 aa3.04□□□□□ -1.92
NUMB-229ENST00000557597 TNP1P09430 55 aa3.03□□□□□ -1.92
NUMB-229ENST00000557597 MT2AP02795 61 aa3.02□□□□□ -1.93
NUMB-229ENST00000557597 FSIP2Q5CZC0 6907 aa3.02□□□□□ -1.93
NUMB-229ENST00000557597 KRTAP19-6Q3LI70 58 aa3.01□□□□□ -1.93
NUMB-229ENST00000557597 KRTAP6-3Q3LI67 103 aa3.01□□□□□ -1.93
NUMB-229ENST00000557597 KRTAP9-3Q9BYQ3 159 aa3□□□□□ -1.93
NUMB-229ENST00000557597 KRTAP10-10P60014 251 aa2.98□□□□□ -1.93
NUMB-229ENST00000557597 PRO2289Q9P1D8 64 aa2.98□□□□□ -1.93
NUMB-229ENST00000557597 MT1FP04733 61 aa2.97□□□□□ -1.93
NUMB-229ENST00000557597 SSPOA2VEC9 5147 aa2.97□□□□□ -1.93
NUMB-229ENST00000557597 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
NUMB-229ENST00000557597 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
NUMB-229ENST00000557597 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
NUMB-229ENST00000557597 USH2AO75445 5202 aa2.95□□□□□ -1.94
NUMB-229ENST00000557597 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
NUMB-229ENST00000557597 INE1O15225 51 aa2.86□□□□□ -1.95
NUMB-229ENST00000557597 KRTAP20-1Q3LI63 56 aa2.85□□□□□ -1.95
NUMB-229ENST00000557597 LCE3AQ5TA76 89 aa2.84□□□□□ -1.96
NUMB-229ENST00000557597 MACF1Q9UPN3 7388 aaKnown RBP2.83□□□□□ -1.96
NUMB-229ENST00000557597 NEBP20929 6669 aa2.82□□□□□ -1.96
NUMB-229ENST00000557597 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
NUMB-229ENST00000557597 SYNE2Q8WXH0 6885 aaKnown RBP2.78□□□□□ -1.97
NUMB-229ENST00000557597 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
NUMB-229ENST00000557597 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
NUMB-229ENST00000557597 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
NUMB-229ENST00000557597 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
NUMB-229ENST00000557597 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
NUMB-229ENST00000557597 MT1BP07438 61 aa2.7□□□□□ -1.98
NUMB-229ENST00000557597 LCE4AQ5TA78 99 aa2.7□□□□□ -1.98
NUMB-229ENST00000557597 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms