RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
SHMT2-233ENST00000557529 MUC17Q685J3 4493 aa6.27□□□□□ -1.41
SHMT2-233ENST00000557529 KRTAP4-1Q9BYQ7 146 aa6.27□□□□□ -1.41
SHMT2-233ENST00000557529 S4R3F8 94 aa6.26□□□□□ -1.41
SHMT2-233ENST00000557529 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
SHMT2-233ENST00000557529 PSPHP1O15172 72 aa6.24□□□□□ -1.41
SHMT2-233ENST00000557529 LCA10Q71F78 164 aa6.22□□□□□ -1.41
SHMT2-233ENST00000557529 A0A1B0GU69 56 aa6.2□□□□□ -1.42
SHMT2-233ENST00000557529 Q5VV11 94 aa6.19□□□□□ -1.42
SHMT2-233ENST00000557529 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
SHMT2-233ENST00000557529 SEC61GP60059 68 aa6.18□□□□□ -1.42
SHMT2-233ENST00000557529 CSAG1Q6PB30 78 aa6.13□□□□□ -1.43
SHMT2-233ENST00000557529 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
SHMT2-233ENST00000557529 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
SHMT2-233ENST00000557529 A6NED7 52 aa6.08□□□□□ -1.44
SHMT2-233ENST00000557529 UQCR11O14957 56 aa6.04□□□□□ -1.44
SHMT2-233ENST00000557529 BRK1Q8WUW1 75 aa6.04□□□□□ -1.44
SHMT2-233ENST00000557529 H0YAA0 97 aa6.01□□□□□ -1.45
SHMT2-233ENST00000557529 A0A1B0GU33 70 aa6□□□□□ -1.45
SHMT2-233ENST00000557529 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
SHMT2-233ENST00000557529 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
SHMT2-233ENST00000557529 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
SHMT2-233ENST00000557529 RNF213Q63HN8 5207 aa5.97□□□□□ -1.45
SHMT2-233ENST00000557529 MIR22HGQ0VDD5 57 aa5.96□□□□□ -1.45
SHMT2-233ENST00000557529 LCE2CQ5TA81 110 aa5.96□□□□□ -1.45
SHMT2-233ENST00000557529 SPATA8Q6RVD6 105 aa5.95□□□□□ -1.46
SHMT2-233ENST00000557529 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
SHMT2-233ENST00000557529 PRO0628Q9UI54 55 aa5.94□□□□□ -1.46
SHMT2-233ENST00000557529 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
SHMT2-233ENST00000557529 MUC2Q02817 5179 aa5.93□□□□□ -1.46
SHMT2-233ENST00000557529 P0C880 135 aa5.93□□□□□ -1.46
SHMT2-233ENST00000557529 A8MU10 97 aa5.88□□□□□ -1.47
SHMT2-233ENST00000557529 MT1HP80294 61 aa5.85□□□□□ -1.47
SHMT2-233ENST00000557529 M0QZ58 72 aa5.84□□□□□ -1.47
SHMT2-233ENST00000557529 M0R2T5 61 aa5.83□□□□□ -1.48
SHMT2-233ENST00000557529 KRTAP13-4Q3LI77 160 aa5.8□□□□□ -1.48
SHMT2-233ENST00000557529 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
SHMT2-233ENST00000557529 R4GN34 69 aa5.77□□□□□ -1.49
SHMT2-233ENST00000557529 CRIPTQ9P021 101 aa5.75□□□□□ -1.49
SHMT2-233ENST00000557529 A0A0D9SG42 100 aa5.73□□□□□ -1.49
SHMT2-233ENST00000557529 K7ERS5 55 aa5.73□□□□□ -1.49
SHMT2-233ENST00000557529 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
SHMT2-233ENST00000557529 LORP23490 312 aaPredicted RBP5.71□□□□□ -1.5
SHMT2-233ENST00000557529 A6NN06 94 aa5.67□□□□□ -1.5
SHMT2-233ENST00000557529 LINC01554Q52M75 96 aa5.65□□□□□ -1.51
SHMT2-233ENST00000557529 MT2AP02795 61 aa5.64□□□□□ -1.51
SHMT2-233ENST00000557529 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
SHMT2-233ENST00000557529 KRTAP12-1P59990 96 aa5.62□□□□□ -1.51
SHMT2-233ENST00000557529 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
SHMT2-233ENST00000557529 SPINT4Q6UDR6 99 aa5.61□□□□□ -1.51
SHMT2-233ENST00000557529 MT1FP04733 61 aa5.59□□□□□ -1.51
SHMT2-233ENST00000557529 KRTAP12-2P59991 146 aa5.59□□□□□ -1.51
SHMT2-233ENST00000557529 LCE2AQ5TA79 106 aaPredicted RBP5.58□□□□□ -1.52
SHMT2-233ENST00000557529 SPRR2GQ9BYE4 73 aa5.56□□□□□ -1.52
SHMT2-233ENST00000557529 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
SHMT2-233ENST00000557529 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
SHMT2-233ENST00000557529 KRTAP19-1Q8IUB9 90 aa5.52□□□□□ -1.53
SHMT2-233ENST00000557529 KTN1-AS1Q86SY8 53 aa5.5□□□□□ -1.53
SHMT2-233ENST00000557529 ROMO1P60602 79 aa5.46□□□□□ -1.54
SHMT2-233ENST00000557529 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
SHMT2-233ENST00000557529 CAMK2N1Q7Z7J9 78 aa5.42□□□□□ -1.54
SHMT2-233ENST00000557529 PLAC4Q8WY50 150 aa5.42□□□□□ -1.54
SHMT2-233ENST00000557529 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
SHMT2-233ENST00000557529 MT1BP07438 61 aa5.31□□□□□ -1.56
SHMT2-233ENST00000557529 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
SHMT2-233ENST00000557529 C10orf95Q9H7T3 257 aa5.3□□□□□ -1.56
SHMT2-233ENST00000557529 LCE2BO14633 110 aa5.29□□□□□ -1.56
SHMT2-233ENST00000557529 KRTAP25-1Q3LHN0 102 aa5.23□□□□□ -1.57
SHMT2-233ENST00000557529 TNP1P09430 55 aa5.16□□□□□ -1.58
SHMT2-233ENST00000557529 MT1XP80297 61 aa5.16□□□□□ -1.58
SHMT2-233ENST00000557529 PRO2289Q9P1D8 64 aa5.16□□□□□ -1.58
SHMT2-233ENST00000557529 KRTAP10-5P60370 271 aa5.15□□□□□ -1.59
SHMT2-233ENST00000557529 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
SHMT2-233ENST00000557529 USH2AO75445 5202 aa5.06□□□□□ -1.6
SHMT2-233ENST00000557529 KRTAP23-1A1A580 65 aa5.05□□□□□ -1.6
SHMT2-233ENST00000557529 KRTAP19-6Q3LI70 58 aa4.96□□□□□ -1.62
SHMT2-233ENST00000557529 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
SHMT2-233ENST00000557529 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
SHMT2-233ENST00000557529 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
SHMT2-233ENST00000557529 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
SHMT2-233ENST00000557529 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
SHMT2-233ENST00000557529 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
SHMT2-233ENST00000557529 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
SHMT2-233ENST00000557529 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
SHMT2-233ENST00000557529 KRTAP9-6A0A140TA67 174 aa4.79□□□□□ -1.64
SHMT2-233ENST00000557529 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
SHMT2-233ENST00000557529 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
SHMT2-233ENST00000557529 KRTAP4-8A0A0G2JLE6 195 aa4.71□□□□□ -1.66
SHMT2-233ENST00000557529 H3BS24 57 aa4.69□□□□□ -1.66
SHMT2-233ENST00000557529 CRCT1Q9UGL9 99 aa4.68□□□□□ -1.66
SHMT2-233ENST00000557529 KRTAP19-5Q3LI72 72 aa4.67□□□□□ -1.66
SHMT2-233ENST00000557529 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
SHMT2-233ENST00000557529 KRTAP15-1Q3LI76 137 aa4.65□□□□□ -1.66
SHMT2-233ENST00000557529 LCE3BQ5TA77 95 aa4.65□□□□□ -1.67
SHMT2-233ENST00000557529 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
SHMT2-233ENST00000557529 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
SHMT2-233ENST00000557529 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
SHMT2-233ENST00000557529 KMT2DO14686 5537 aa4.54□□□□□ -1.68
SHMT2-233ENST00000557529 KRTAP4-12Q9BQ66 201 aa4.53□□□□□ -1.69
SHMT2-233ENST00000557529 MT1EP04732 61 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms