RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 CYP4F30PQ9H0H9 118 aa5.98□□□□□ -1.45
SLIRP-209ENST00000557342 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
SLIRP-209ENST00000557342 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SLIRP-209ENST00000557342 CCDC179H3BU77 68 aa5.94□□□□□ -1.46
SLIRP-209ENST00000557342 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
SLIRP-209ENST00000557342 KRTAP3-1Q9BYR8 98 aa5.94□□□□□ -1.46
SLIRP-209ENST00000557342 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
SLIRP-209ENST00000557342 SNURFQ9Y675 71 aa5.93□□□□□ -1.46
SLIRP-209ENST00000557342 PCP4P48539 62 aa5.92□□□□□ -1.46
SLIRP-209ENST00000557342 S4R3F8 94 aa5.92□□□□□ -1.46
SLIRP-209ENST00000557342 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
SLIRP-209ENST00000557342 NDUFC1O43677 76 aa5.9□□□□□ -1.46
SLIRP-209ENST00000557342 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.88□□□□□ -1.47
SLIRP-209ENST00000557342 CSAG1Q6PB30 78 aa5.87□□□□□ -1.47
SLIRP-209ENST00000557342 CYSTM1Q9H1C7 97 aa5.87□□□□□ -1.47
SLIRP-209ENST00000557342 LCA10Q71F78 164 aa5.86□□□□□ -1.47
SLIRP-209ENST00000557342 H7BZZ5 65 aa5.85□□□□□ -1.47
SLIRP-209ENST00000557342 SPANXA2-OT1Q8N9U9 137 aa5.83□□□□□ -1.48
SLIRP-209ENST00000557342 A8MUN3 132 aa5.8□□□□□ -1.48
SLIRP-209ENST00000557342 TMEM258P61165 79 aa5.77□□□□□ -1.49
SLIRP-209ENST00000557342 ATP5EP56381 51 aaPredicted RBP5.76□□□□□ -1.49
SLIRP-209ENST00000557342 DMAC1Q96GE9 116 aa5.76□□□□□ -1.49
SLIRP-209ENST00000557342 USH2AO75445 5202 aa5.73□□□□□ -1.49
SLIRP-209ENST00000557342 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
SLIRP-209ENST00000557342 SSPOA2VEC9 5147 aa5.7□□□□□ -1.5
SLIRP-209ENST00000557342 ACYP2P14621 99 aa5.68□□□□□ -1.5
SLIRP-209ENST00000557342 KRTAP19-6Q3LI70 58 aa5.66□□□□□ -1.5
SLIRP-209ENST00000557342 H0YAA0 97 aa5.65□□□□□ -1.5
SLIRP-209ENST00000557342 SPRR2GQ9BYE4 73 aa5.64□□□□□ -1.51
SLIRP-209ENST00000557342 CRIPTQ9P021 101 aa5.64□□□□□ -1.51
SLIRP-209ENST00000557342 COA5Q86WW8 74 aa5.62□□□□□ -1.51
SLIRP-209ENST00000557342 FCGBPQ9Y6R7 5405 aaPredicted RBP5.61□□□□□ -1.51
SLIRP-209ENST00000557342 Q5VV11 94 aa5.59□□□□□ -1.51
SLIRP-209ENST00000557342 KRTAP19-8Q3LI54 63 aa5.58□□□□□ -1.52
SLIRP-209ENST00000557342 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
SLIRP-209ENST00000557342 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
SLIRP-209ENST00000557342 ADM2Q7Z4H4 148 aa5.57□□□□□ -1.52
SLIRP-209ENST00000557342 MT1BP07438 61 aa5.54□□□□□ -1.52
SLIRP-209ENST00000557342 SPTSSBQ8NFR3 76 aa5.53□□□□□ -1.52
SLIRP-209ENST00000557342 RPS28P62857 69 aaKnown RBP5.51□□□□□ -1.53
SLIRP-209ENST00000557342 MACF1Q9UPN3 7388 aaKnown RBP5.49□□□□□ -1.53
SLIRP-209ENST00000557342 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
SLIRP-209ENST00000557342 A6NN06 94 aa5.46□□□□□ -1.54
SLIRP-209ENST00000557342 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
SLIRP-209ENST00000557342 P0C880 135 aa5.44□□□□□ -1.54
SLIRP-209ENST00000557342 R4GN34 69 aa5.44□□□□□ -1.54
SLIRP-209ENST00000557342 SMIM26A0A096LP01 95 aa5.41□□□□□ -1.54
SLIRP-209ENST00000557342 KRTAP10-5P60370 271 aa5.41□□□□□ -1.54
SLIRP-209ENST00000557342 M0QZ58 72 aa5.39□□□□□ -1.55
SLIRP-209ENST00000557342 LINC01558Q9Y6Z2 57 aa5.37□□□□□ -1.55
SLIRP-209ENST00000557342 PLAC4Q8WY50 150 aa5.36□□□□□ -1.55
SLIRP-209ENST00000557342 V9GYY9 64 aa5.36□□□□□ -1.55
SLIRP-209ENST00000557342 Q1T7F1 81 aa5.34□□□□□ -1.55
SLIRP-209ENST00000557342 SEC61GP60059 68 aa5.32□□□□□ -1.56
SLIRP-209ENST00000557342 A0A1B0GU69 56 aa5.31□□□□□ -1.56
SLIRP-209ENST00000557342 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
SLIRP-209ENST00000557342 PRR15LQ9BU68 103 aa5.3□□□□□ -1.56
SLIRP-209ENST00000557342 KRTAP6-3Q3LI67 103 aa5.29□□□□□ -1.56
SLIRP-209ENST00000557342 LINC01554Q52M75 96 aa5.29□□□□□ -1.56
SLIRP-209ENST00000557342 KRTAP4-12Q9BQ66 201 aa5.25□□□□□ -1.57
SLIRP-209ENST00000557342 MT1XP80297 61 aa5.23□□□□□ -1.57
SLIRP-209ENST00000557342 PSPHP1O15172 72 aa5.21□□□□□ -1.58
SLIRP-209ENST00000557342 LCE3BQ5TA77 95 aa5.2□□□□□ -1.58
SLIRP-209ENST00000557342 A0A1B0GU33 70 aa5.19□□□□□ -1.58
SLIRP-209ENST00000557342 NEBP20929 6669 aa5.13□□□□□ -1.59
SLIRP-209ENST00000557342 UQCR11O14957 56 aa5.13□□□□□ -1.59
SLIRP-209ENST00000557342 KRTAP13-4Q3LI77 160 aa5.12□□□□□ -1.59
SLIRP-209ENST00000557342 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
SLIRP-209ENST00000557342 KRTAP20-1Q3LI63 56 aa5.11□□□□□ -1.59
SLIRP-209ENST00000557342 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
SLIRP-209ENST00000557342 KRTAP5-9P26371 169 aa5.1□□□□□ -1.59
SLIRP-209ENST00000557342 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
SLIRP-209ENST00000557342 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
SLIRP-209ENST00000557342 SPATA8Q6RVD6 105 aa5.08□□□□□ -1.6
SLIRP-209ENST00000557342 A6NED7 52 aa5.07□□□□□ -1.6
SLIRP-209ENST00000557342 MIR22HGQ0VDD5 57 aa5.05□□□□□ -1.6
SLIRP-209ENST00000557342 CAMK2N1Q7Z7J9 78 aa5.02□□□□□ -1.61
SLIRP-209ENST00000557342 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
SLIRP-209ENST00000557342 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
SLIRP-209ENST00000557342 A0A0D9SG42 100 aa5□□□□□ -1.61
SLIRP-209ENST00000557342 A8MU10 97 aa4.99□□□□□ -1.61
SLIRP-209ENST00000557342 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
SLIRP-209ENST00000557342 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
SLIRP-209ENST00000557342 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
SLIRP-209ENST00000557342 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
SLIRP-209ENST00000557342 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
SLIRP-209ENST00000557342 KMT2DO14686 5537 aa4.93□□□□□ -1.62
SLIRP-209ENST00000557342 KRTAP12-1P59990 96 aa4.93□□□□□ -1.62
SLIRP-209ENST00000557342 BRK1Q8WUW1 75 aa4.89□□□□□ -1.63
SLIRP-209ENST00000557342 SPRR2EP22531 72 aa4.88□□□□□ -1.63
SLIRP-209ENST00000557342 SPRR2BP35325 72 aa4.88□□□□□ -1.63
SLIRP-209ENST00000557342 SPRR2AP35326 72 aa4.88□□□□□ -1.63
SLIRP-209ENST00000557342 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
SLIRP-209ENST00000557342 MDN1Q9NU22 5596 aa4.87□□□□□ -1.63
SLIRP-209ENST00000557342 K7ERS5 55 aa4.86□□□□□ -1.63
SLIRP-209ENST00000557342 KRTAP4-7Q9BYR0 210 aa4.84□□□□□ -1.63
SLIRP-209ENST00000557342 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
SLIRP-209ENST00000557342 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
SLIRP-209ENST00000557342 LCE1AQ5T7P2 110 aa4.82□□□□□ -1.64
SLIRP-209ENST00000557342 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms