RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 BPY2O14599 106 aa5.33□□□□□ -1.56
SNX6-209ENST00000557265 CASC2Q6XLA1 102 aa5.33□□□□□ -1.56
SNX6-209ENST00000557265 C1orf64Q8NEQ6 169 aa5.33□□□□□ -1.56
SNX6-209ENST00000557265 H3BT86 120 aa5.32□□□□□ -1.56
SNX6-209ENST00000557265 CXCL6P80162 114 aa5.31□□□□□ -1.56
SNX6-209ENST00000557265 Q8N9L7 120 aa5.31□□□□□ -1.56
SNX6-209ENST00000557265 SPCS1Q9Y6A9 102 aa5.31□□□□□ -1.56
SNX6-209ENST00000557265 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
SNX6-209ENST00000557265 KRTAP2-1Q9BYU5 128 aa5.29□□□□□ -1.56
SNX6-209ENST00000557265 KRTAP4-8A0A0G2JLE6 195 aa5.28□□□□□ -1.56
SNX6-209ENST00000557265 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
SNX6-209ENST00000557265 COL5A1-AS1Q5SY13 56 aa5.26□□□□□ -1.57
SNX6-209ENST00000557265 PCP4L1A6NKN8 68 aa5.23□□□□□ -1.57
SNX6-209ENST00000557265 K7EP34 96 aa5.23□□□□□ -1.57
SNX6-209ENST00000557265 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
SNX6-209ENST00000557265 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
SNX6-209ENST00000557265 PRO0461Q9UI25 63 aa5.22□□□□□ -1.57
SNX6-209ENST00000557265 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
SNX6-209ENST00000557265 SPRR2DP22532 72 aa5.17□□□□□ -1.58
SNX6-209ENST00000557265 A0A087WVE0 104 aa5.16□□□□□ -1.58
SNX6-209ENST00000557265 MT1XP80297 61 aa5.16□□□□□ -1.58
SNX6-209ENST00000557265 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
SNX6-209ENST00000557265 GTF2H5Q6ZYL4 71 aa5.13□□□□□ -1.59
SNX6-209ENST00000557265 LCE1DQ5T752 114 aa5.11□□□□□ -1.59
SNX6-209ENST00000557265 UBL5Q9BZL1 73 aa5.11□□□□□ -1.59
SNX6-209ENST00000557265 KRTAP4-7Q9BYR0 210 aa5.1□□□□□ -1.59
SNX6-209ENST00000557265 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
SNX6-209ENST00000557265 A8MUN3 132 aa5.09□□□□□ -1.59
SNX6-209ENST00000557265 H0YAA0 97 aa5.09□□□□□ -1.59
SNX6-209ENST00000557265 KRTAP12-2P59991 146 aa5.09□□□□□ -1.59
SNX6-209ENST00000557265 ETDBQ3ZM63 59 aa5.09□□□□□ -1.59
SNX6-209ENST00000557265 F8W1H4 67 aa5.08□□□□□ -1.6
SNX6-209ENST00000557265 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
SNX6-209ENST00000557265 CYP4F30PQ9H0H9 118 aa5.08□□□□□ -1.6
SNX6-209ENST00000557265 ADM2Q7Z4H4 148 aa5.06□□□□□ -1.6
SNX6-209ENST00000557265 NDUFC1O43677 76 aa5.05□□□□□ -1.6
SNX6-209ENST00000557265 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
SNX6-209ENST00000557265 KRTAP4-9Q9BYQ8 210 aa4.98□□□□□ -1.61
SNX6-209ENST00000557265 LOC101927531A0A1B0GV80 90 aa4.97□□□□□ -1.61
SNX6-209ENST00000557265 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
SNX6-209ENST00000557265 TRAV22A0A0B4J277 110 aa4.95□□□□□ -1.62
SNX6-209ENST00000557265 A0A1B0GV90 55 aa4.94□□□□□ -1.62
SNX6-209ENST00000557265 R4GN34 69 aa4.94□□□□□ -1.62
SNX6-209ENST00000557265 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
SNX6-209ENST00000557265 FAM240AA0A1B0GVK7 77 aa4.92□□□□□ -1.62
SNX6-209ENST00000557265 ACYP1P07311 99 aa4.92□□□□□ -1.62
SNX6-209ENST00000557265 ATP5EP2Q5VTU8 51 aa4.9□□□□□ -1.63
SNX6-209ENST00000557265 M0QZ58 72 aa4.89□□□□□ -1.63
SNX6-209ENST00000557265 P0C880 135 aa4.89□□□□□ -1.63
SNX6-209ENST00000557265 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
SNX6-209ENST00000557265 HIST1H4AP62805 103 aaKnown RBP4.89□□□□□ -1.63
SNX6-209ENST00000557265 KRTAP4-2Q9BYR5 136 aa4.89□□□□□ -1.63
SNX6-209ENST00000557265 LINC01554Q52M75 96 aa4.86□□□□□ -1.63
SNX6-209ENST00000557265 C20orf197Q8N268 126 aa4.85□□□□□ -1.63
SNX6-209ENST00000557265 H0Y9P7 68 aa4.83□□□□□ -1.64
SNX6-209ENST00000557265 ATOX1O00244 68 aa4.83□□□□□ -1.64
SNX6-209ENST00000557265 UQCRQO14949 82 aa4.82□□□□□ -1.64
SNX6-209ENST00000557265 LINC00643Q86TS7 51 aa4.82□□□□□ -1.64
SNX6-209ENST00000557265 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
SNX6-209ENST00000557265 H3BS24 57 aa4.77□□□□□ -1.65
SNX6-209ENST00000557265 KRTAP19-4Q3LI73 84 aa4.77□□□□□ -1.65
SNX6-209ENST00000557265 LINC00208Q96KT6 92 aa4.74□□□□□ -1.65
SNX6-209ENST00000557265 OCR1Q9BZK8 76 aa4.74□□□□□ -1.65
SNX6-209ENST00000557265 J3QR89 54 aa4.72□□□□□ -1.65
SNX6-209ENST00000557265 LCE5AQ5TCM9 118 aa4.7□□□□□ -1.66
SNX6-209ENST00000557265 MP68P56378 58 aa4.69□□□□□ -1.66
SNX6-209ENST00000557265 MT-ATP8P03928 68 aa4.67□□□□□ -1.66
SNX6-209ENST00000557265 HMCN1Q96RW7 5635 aa4.67□□□□□ -1.66
SNX6-209ENST00000557265 SCGB1A1P11684 91 aa4.64□□□□□ -1.67
SNX6-209ENST00000557265 KRTAP19-3Q7Z4W3 81 aa4.63□□□□□ -1.67
SNX6-209ENST00000557265 KRTAP19-7Q3SYF9 63 aa4.62□□□□□ -1.67
SNX6-209ENST00000557265 DMAC1Q96GE9 116 aa4.62□□□□□ -1.67
SNX6-209ENST00000557265 H3BPC8 53 aa4.6□□□□□ -1.67
SNX6-209ENST00000557265 MT1EP04732 61 aa4.6□□□□□ -1.67
SNX6-209ENST00000557265 K7ERU9 68 aa4.59□□□□□ -1.67
SNX6-209ENST00000557265 MT4P47944 62 aa4.57□□□□□ -1.68
SNX6-209ENST00000557265 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
SNX6-209ENST00000557265 CYSTM1Q9H1C7 97 aa4.55□□□□□ -1.68
SNX6-209ENST00000557265 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
SNX6-209ENST00000557265 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
SNX6-209ENST00000557265 KRTAP5-10Q6L8G5 202 aa4.49□□□□□ -1.69
SNX6-209ENST00000557265 SMIM20Q8N5G0 67 aa4.49□□□□□ -1.69
SNX6-209ENST00000557265 MT1GP13640 62 aa4.48□□□□□ -1.69
SNX6-209ENST00000557265 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
SNX6-209ENST00000557265 SPTSSBQ8NFR3 76 aa4.46□□□□□ -1.7
SNX6-209ENST00000557265 ACYP2P14621 99 aa4.45□□□□□ -1.7
SNX6-209ENST00000557265 PP632Q6XCG6 107 aa4.44□□□□□ -1.7
SNX6-209ENST00000557265 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
SNX6-209ENST00000557265 KRTAP13-4Q3LI77 160 aa4.42□□□□□ -1.7
SNX6-209ENST00000557265 KRTAP5-3Q6L8H2 238 aa4.41□□□□□ -1.7
SNX6-209ENST00000557265 MT1MQ8N339 61 aa4.41□□□□□ -1.7
SNX6-209ENST00000557265 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
SNX6-209ENST00000557265 A0A0D9SG42 100 aa4.39□□□□□ -1.71
SNX6-209ENST00000557265 SERP2Q8N6R1 65 aa4.39□□□□□ -1.71
SNX6-209ENST00000557265 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
SNX6-209ENST00000557265 KRTAP5-7Q6L8G8 165 aa4.36□□□□□ -1.71
SNX6-209ENST00000557265 SPANXA2-OT1Q8N9U9 137 aa4.34□□□□□ -1.71
SNX6-209ENST00000557265 MT1LQ93083 61 aa4.34□□□□□ -1.71
SNX6-209ENST00000557265 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
SNX6-209ENST00000557265 COX7CP15954 63 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms