RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 LCA10Q71F78 164 aa4.83□□□□□ -1.64
SNX6-208ENST00000556712 LINC00643Q86TS7 51 aa4.82□□□□□ -1.64
SNX6-208ENST00000556712 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
SNX6-208ENST00000556712 H0Y9P7 68 aa4.81□□□□□ -1.64
SNX6-208ENST00000556712 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
SNX6-208ENST00000556712 UQCRQO14949 82 aa4.8□□□□□ -1.64
SNX6-208ENST00000556712 FCGBPQ9Y6R7 5405 aaPredicted RBP4.8□□□□□ -1.64
SNX6-208ENST00000556712 FAM236AA0A1B0GUQ0 79 aa4.78□□□□□ -1.64
SNX6-208ENST00000556712 FAM236BA0A1B0GV22 79 aa4.78□□□□□ -1.64
SNX6-208ENST00000556712 H3BS24 57 aa4.77□□□□□ -1.65
SNX6-208ENST00000556712 CSAG1Q6PB30 78 aa4.76□□□□□ -1.65
SNX6-208ENST00000556712 ATOX1O00244 68 aa4.75□□□□□ -1.65
SNX6-208ENST00000556712 KRTAP19-6Q3LI70 58 aa4.74□□□□□ -1.65
SNX6-208ENST00000556712 LINC00208Q96KT6 92 aa4.74□□□□□ -1.65
SNX6-208ENST00000556712 OCR1Q9BZK8 76 aa4.74□□□□□ -1.65
SNX6-208ENST00000556712 KLKP1Q107X0 134 aa4.73□□□□□ -1.65
SNX6-208ENST00000556712 J3QR89 54 aa4.72□□□□□ -1.65
SNX6-208ENST00000556712 KRTAP4-11Q9BYQ6 195 aa4.71□□□□□ -1.66
SNX6-208ENST00000556712 MP68P56378 58 aa4.69□□□□□ -1.66
SNX6-208ENST00000556712 KRTAP19-4Q3LI73 84 aa4.67□□□□□ -1.66
SNX6-208ENST00000556712 MT1BP07438 61 aa4.65□□□□□ -1.67
SNX6-208ENST00000556712 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
SNX6-208ENST00000556712 A8MUN3 132 aa4.64□□□□□ -1.67
SNX6-208ENST00000556712 SCGB1A1P11684 91 aa4.64□□□□□ -1.67
SNX6-208ENST00000556712 LCE5AQ5TCM9 118 aa4.64□□□□□ -1.67
SNX6-208ENST00000556712 NDUFC1O43677 76 aa4.63□□□□□ -1.67
SNX6-208ENST00000556712 MT-ATP8P03928 68 aa4.63□□□□□ -1.67
SNX6-208ENST00000556712 MACF1Q9UPN3 7388 aaKnown RBP4.63□□□□□ -1.67
SNX6-208ENST00000556712 KRTAP19-8Q3LI54 63 aa4.62□□□□□ -1.67
SNX6-208ENST00000556712 Q5VV11 94 aa4.62□□□□□ -1.67
SNX6-208ENST00000556712 H3BPC8 53 aa4.6□□□□□ -1.67
SNX6-208ENST00000556712 IMUPQ9GZP8 106 aa4.6□□□□□ -1.67
SNX6-208ENST00000556712 K7ERU9 68 aa4.59□□□□□ -1.67
SNX6-208ENST00000556712 H0YAA0 97 aa4.58□□□□□ -1.68
SNX6-208ENST00000556712 ADM2Q7Z4H4 148 aa4.58□□□□□ -1.68
SNX6-208ENST00000556712 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
SNX6-208ENST00000556712 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
SNX6-208ENST00000556712 SYNE2Q8WXH0 6885 aaKnown RBP4.56□□□□□ -1.68
SNX6-208ENST00000556712 A6NN06 94 aa4.55□□□□□ -1.68
SNX6-208ENST00000556712 TRAV7A0A075B6U4 112 aa4.52□□□□□ -1.69
SNX6-208ENST00000556712 KRTAP10-5P60370 271 aa4.51□□□□□ -1.69
SNX6-208ENST00000556712 P0C880 135 aa4.49□□□□□ -1.69
SNX6-208ENST00000556712 SMIM20Q8N5G0 67 aa4.49□□□□□ -1.69
SNX6-208ENST00000556712 SNURFQ9Y675 71 aa4.47□□□□□ -1.69
SNX6-208ENST00000556712 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
SNX6-208ENST00000556712 ACYP2P14621 99 aa4.43□□□□□ -1.7
SNX6-208ENST00000556712 R4GN34 69 aa4.43□□□□□ -1.7
SNX6-208ENST00000556712 M0QZ58 72 aa4.42□□□□□ -1.7
SNX6-208ENST00000556712 C20orf197Q8N268 126 aa4.42□□□□□ -1.7
SNX6-208ENST00000556712 SERP2Q8N6R1 65 aa4.39□□□□□ -1.71
SNX6-208ENST00000556712 CHKB-CPT1BH3BT56 60 aa4.38□□□□□ -1.71
SNX6-208ENST00000556712 MT1XP80297 61 aa4.37□□□□□ -1.71
SNX6-208ENST00000556712 LINC01554Q52M75 96 aa4.37□□□□□ -1.71
SNX6-208ENST00000556712 PLAC4Q8WY50 150 aa4.37□□□□□ -1.71
SNX6-208ENST00000556712 SPTSSBQ8NFR3 76 aa4.35□□□□□ -1.71
SNX6-208ENST00000556712 SPANXA2-OT1Q8N9U9 137 aa4.34□□□□□ -1.71
SNX6-208ENST00000556712 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
SNX6-208ENST00000556712 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
SNX6-208ENST00000556712 KMT2DO14686 5537 aa4.29□□□□□ -1.72
SNX6-208ENST00000556712 NEBP20929 6669 aa4.28□□□□□ -1.72
SNX6-208ENST00000556712 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
SNX6-208ENST00000556712 COX7CP15954 63 aa4.27□□□□□ -1.73
SNX6-208ENST00000556712 COA5Q86WW8 74 aa4.27□□□□□ -1.73
SNX6-208ENST00000556712 CYSTM1Q9H1C7 97 aa4.27□□□□□ -1.73
SNX6-208ENST00000556712 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
SNX6-208ENST00000556712 KRTAP5-3Q6L8H2 238 aa4.23□□□□□ -1.73
SNX6-208ENST00000556712 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
SNX6-208ENST00000556712 H7BZZ5 65 aa4.21□□□□□ -1.74
SNX6-208ENST00000556712 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
SNX6-208ENST00000556712 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
SNX6-208ENST00000556712 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
SNX6-208ENST00000556712 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
SNX6-208ENST00000556712 ANAPC13Q9BS18 74 aa4.15□□□□□ -1.75
SNX6-208ENST00000556712 SPRR2EP22531 72 aa4.13□□□□□ -1.75
SNX6-208ENST00000556712 SPRR2BP35325 72 aa4.13□□□□□ -1.75
SNX6-208ENST00000556712 SPRR2AP35326 72 aa4.13□□□□□ -1.75
SNX6-208ENST00000556712 KRTAP10-12P60413 245 aa4.13□□□□□ -1.75
SNX6-208ENST00000556712 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
SNX6-208ENST00000556712 SERP1Q9Y6X1 66 aa4.12□□□□□ -1.75
SNX6-208ENST00000556712 A0A0D9SG42 100 aa4.11□□□□□ -1.75
SNX6-208ENST00000556712 CCDC179H3BU77 68 aa4.11□□□□□ -1.75
SNX6-208ENST00000556712 SEC61GP60059 68 aa4.11□□□□□ -1.75
SNX6-208ENST00000556712 SPATA8Q6RVD6 105 aa4.11□□□□□ -1.75
SNX6-208ENST00000556712 CAMK2N1Q7Z7J9 78 aa4.09□□□□□ -1.75
SNX6-208ENST00000556712 A0A1B0GU33 70 aa4.06□□□□□ -1.76
SNX6-208ENST00000556712 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
SNX6-208ENST00000556712 SPINT4Q6UDR6 99 aa4.03□□□□□ -1.76
SNX6-208ENST00000556712 A0A1B0GU69 56 aa4.02□□□□□ -1.77
SNX6-208ENST00000556712 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
SNX6-208ENST00000556712 KRTAP2-3P0C7H8 128 aa4□□□□□ -1.77
SNX6-208ENST00000556712 KRTAP2-4Q9BYR9 128 aa4□□□□□ -1.77
SNX6-208ENST00000556712 SPRR2DP22532 72 aa3.98□□□□□ -1.77
SNX6-208ENST00000556712 ATP5EP56381 51 aaPredicted RBP3.98□□□□□ -1.77
SNX6-208ENST00000556712 A8MU10 97 aa3.97□□□□□ -1.77
SNX6-208ENST00000556712 SMIM26A0A096LP01 95 aa3.93□□□□□ -1.78
SNX6-208ENST00000556712 TMEM258P61165 79 aa3.91□□□□□ -1.78
SNX6-208ENST00000556712 KRTAP19-7Q3SYF9 63 aa3.91□□□□□ -1.78
SNX6-208ENST00000556712 PRR15LQ9BU68 103 aa3.89□□□□□ -1.79
SNX6-208ENST00000556712 LINC01558Q9Y6Z2 57 aa3.89□□□□□ -1.79
SNX6-208ENST00000556712 MT1EP04732 61 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms