RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-208ENST00000556658 KRTAP4-1Q9BYQ7 146 aa10.17□□□□□ -0.78
RGMA-208ENST00000556658 KRTAP3-1Q9BYR8 98 aa10.1□□□□□ -0.79
RGMA-208ENST00000556658 COA5Q86WW8 74 aa10.08□□□□□ -0.8
RGMA-208ENST00000556658 CHKB-CPT1BH3BT56 60 aa10.01□□□□□ -0.81
RGMA-208ENST00000556658 H1FX-AS1Q4G0G2 97 aa10□□□□□ -0.81
RGMA-208ENST00000556658 LCA10Q71F78 164 aa9.99□□□□□ -0.81
RGMA-208ENST00000556658 MUC2Q02817 5179 aa9.98□□□□□ -0.81
RGMA-208ENST00000556658 UBR4Q5T4S7 5183 aa9.97□□□□□ -0.81
RGMA-208ENST00000556658 A6NN06 94 aa9.92□□□□□ -0.82
RGMA-208ENST00000556658 S4R3F8 94 aa9.89□□□□□ -0.83
RGMA-208ENST00000556658 RNF213Q63HN8 5207 aa9.87□□□□□ -0.83
RGMA-208ENST00000556658 KRTAP19-2Q3LHN2 52 aa9.87□□□□□ -0.83
RGMA-208ENST00000556658 SPTSSBQ8NFR3 76 aa9.86□□□□□ -0.83
RGMA-208ENST00000556658 PSPHP1O15172 72 aa9.83□□□□□ -0.84
RGMA-208ENST00000556658 Q5VV11 94 aa9.81□□□□□ -0.84
RGMA-208ENST00000556658 KRTAP3-3Q9BYR6 98 aa9.76□□□□□ -0.85
RGMA-208ENST00000556658 A8MU10 97 aa9.71□□□□□ -0.85
RGMA-208ENST00000556658 LCE2CQ5TA81 110 aa9.71□□□□□ -0.85
RGMA-208ENST00000556658 CSAG1Q6PB30 78 aa9.71□□□□□ -0.85
RGMA-208ENST00000556658 LINC01554Q52M75 96 aa9.68□□□□□ -0.86
RGMA-208ENST00000556658 CDC42SE1Q9NRR8 79 aa9.68□□□□□ -0.86
RGMA-208ENST00000556658 FLGP20930 4061 aaPredicted RBP9.67□□□□□ -0.86
RGMA-208ENST00000556658 LINC01558Q9Y6Z2 57 aa9.66□□□□□ -0.86
RGMA-208ENST00000556658 PRR15LQ9BU68 103 aa9.57□□□□□ -0.88
RGMA-208ENST00000556658 A0A1B0GU69 56 aa9.55□□□□□ -0.88
RGMA-208ENST00000556658 MT1HP80294 61 aa9.55□□□□□ -0.88
RGMA-208ENST00000556658 FAT4Q6V0I7 4981 aa9.54□□□□□ -0.88
RGMA-208ENST00000556658 M0R2T5 61 aa9.53□□□□□ -0.88
RGMA-208ENST00000556658 A6NED7 52 aa9.53□□□□□ -0.88
RGMA-208ENST00000556658 H0YAA0 97 aa9.45□□□□□ -0.9
RGMA-208ENST00000556658 ADM2Q7Z4H4 148 aa9.43□□□□□ -0.9
RGMA-208ENST00000556658 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
RGMA-208ENST00000556658 KRTAP10-6P60371 365 aaPredicted RBP9.36□□□□□ -0.91
RGMA-208ENST00000556658 P0C880 135 aa9.32□□□□□ -0.92
RGMA-208ENST00000556658 A0A0A0MQY5 61 aa9.32□□□□□ -0.92
RGMA-208ENST00000556658 PRAC1Q96KF2 57 aa9.32□□□□□ -0.92
RGMA-208ENST00000556658 A0A1B0GU33 70 aa9.3□□□□□ -0.92
RGMA-208ENST00000556658 LCE2AQ5TA79 106 aaPredicted RBP9.25□□□□□ -0.93
RGMA-208ENST00000556658 UQCR11O14957 56 aa9.24□□□□□ -0.93
RGMA-208ENST00000556658 KRTAP9-8Q9BYQ0 159 aa9.17□□□□□ -0.94
RGMA-208ENST00000556658 LORP23490 312 aaPredicted RBP9.16□□□□□ -0.94
RGMA-208ENST00000556658 M0QZ58 72 aa9.14□□□□□ -0.95
RGMA-208ENST00000556658 R4GN34 69 aa9.14□□□□□ -0.95
RGMA-208ENST00000556658 MT2AP02795 61 aa9.13□□□□□ -0.95
RGMA-208ENST00000556658 MIR22HGQ0VDD5 57 aa9.12□□□□□ -0.95
RGMA-208ENST00000556658 CRIPTQ9P021 101 aa9.12□□□□□ -0.95
RGMA-208ENST00000556658 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
RGMA-208ENST00000556658 SPATA8Q6RVD6 105 aa9.11□□□□□ -0.95
RGMA-208ENST00000556658 KRTAP13-4Q3LI77 160 aa9.1□□□□□ -0.95
RGMA-208ENST00000556658 MT1FP04733 61 aa9.07□□□□□ -0.96
RGMA-208ENST00000556658 ROMO1P60602 79 aa9.01□□□□□ -0.97
RGMA-208ENST00000556658 A0A0D9SG42 100 aa8.95□□□□□ -0.98
RGMA-208ENST00000556658 SPRR2GQ9BYE4 73 aa8.91□□□□□ -0.98
RGMA-208ENST00000556658 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
RGMA-208ENST00000556658 KRTAP9-3Q9BYQ3 159 aa8.85□□□□□ -0.99
RGMA-208ENST00000556658 K7ERS5 55 aa8.78□□□□□ -1
RGMA-208ENST00000556658 SPINT4Q6UDR6 99 aa8.77□□□□□ -1.01
RGMA-208ENST00000556658 KRTAP12-1P59990 96 aa8.74□□□□□ -1.01
RGMA-208ENST00000556658 KRTAP25-1Q3LHN0 102 aa8.73□□□□□ -1.01
RGMA-208ENST00000556658 KRTAP12-2P59991 146 aa8.71□□□□□ -1.01
RGMA-208ENST00000556658 KRTAP19-8Q3LI54 63 aa8.68□□□□□ -1.02
RGMA-208ENST00000556658 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
RGMA-208ENST00000556658 LCE2BO14633 110 aa8.61□□□□□ -1.03
RGMA-208ENST00000556658 MT1BP07438 61 aa8.55□□□□□ -1.04
RGMA-208ENST00000556658 CAMK2N1Q7Z7J9 78 aa8.55□□□□□ -1.04
RGMA-208ENST00000556658 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
RGMA-208ENST00000556658 USH2AO75445 5202 aa8.36□□□□□ -1.07
RGMA-208ENST00000556658 NDUFAF8A1L188 74 aa8.34□□□□□ -1.07
RGMA-208ENST00000556658 LUZP6Q538Z0 58 aa8.32□□□□□ -1.08
RGMA-208ENST00000556658 C10orf95Q9H7T3 257 aa8.28□□□□□ -1.08
RGMA-208ENST00000556658 PRO2289Q9P1D8 64 aa8.28□□□□□ -1.08
RGMA-208ENST00000556658 MT1XP80297 61 aa8.26□□□□□ -1.09
RGMA-208ENST00000556658 KRTAP15-1Q3LI76 137 aa8.25□□□□□ -1.09
RGMA-208ENST00000556658 KRTAP10-5P60370 271 aa8.24□□□□□ -1.09
RGMA-208ENST00000556658 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
RGMA-208ENST00000556658 FSIP2Q5CZC0 6907 aa8.15□□□□□ -1.11
RGMA-208ENST00000556658 KRTAP19-6Q3LI70 58 aa8.14□□□□□ -1.11
RGMA-208ENST00000556658 SSPOA2VEC9 5147 aa8.11□□□□□ -1.11
RGMA-208ENST00000556658 TNP1P09430 55 aa8.11□□□□□ -1.11
RGMA-208ENST00000556658 KRTAP10-7P60409 375 aaPredicted RBP7.92□□□□□ -1.14
RGMA-208ENST00000556658 CRCT1Q9UGL9 99 aa7.92□□□□□ -1.14
RGMA-208ENST00000556658 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
RGMA-208ENST00000556658 KRTAP23-1A1A580 65 aa7.81□□□□□ -1.16
RGMA-208ENST00000556658 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
RGMA-208ENST00000556658 PP632Q6XCG6 107 aa7.8□□□□□ -1.16
RGMA-208ENST00000556658 LCE3AQ5TA76 89 aa7.73□□□□□ -1.17
RGMA-208ENST00000556658 KRTAP4-8A0A0G2JLE6 195 aa7.64□□□□□ -1.19
RGMA-208ENST00000556658 KRTAP4-8Q9BYQ9 185 aa7.64□□□□□ -1.19
RGMA-208ENST00000556658 KRTAP9-6A0A140TA67 174 aa7.62□□□□□ -1.19
RGMA-208ENST00000556658 KMT2DO14686 5537 aa7.6□□□□□ -1.19
RGMA-208ENST00000556658 KRTAP8-1Q8IUC2 63 aa7.58□□□□□ -1.2
RGMA-208ENST00000556658 MACF1Q9UPN3 7388 aaKnown RBP7.48□□□□□ -1.21
RGMA-208ENST00000556658 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
RGMA-208ENST00000556658 KRTAP19-5Q3LI72 72 aa7.45□□□□□ -1.22
RGMA-208ENST00000556658 KRTAP19-7Q3SYF9 63 aa7.36□□□□□ -1.23
RGMA-208ENST00000556658 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
RGMA-208ENST00000556658 SYNE2Q8WXH0 6885 aaKnown RBP7.25□□□□□ -1.25
RGMA-208ENST00000556658 MT1EP04732 61 aa7.25□□□□□ -1.25
RGMA-208ENST00000556658 SPRR2FQ96RM1 72 aa7.24□□□□□ -1.25
RGMA-208ENST00000556658 KRTAP5-9P26371 169 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms