RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 KRTAP19-8Q3LI54 63 aa5.35□□□□□ -1.55
ACTN1-221ENST00000556571 A0A087WVE0 104 aa5.34□□□□□ -1.55
ACTN1-221ENST00000556571 LOC101927531A0A1B0GV80 90 aa5.34□□□□□ -1.55
ACTN1-221ENST00000556571 ATOX1O00244 68 aa5.34□□□□□ -1.55
ACTN1-221ENST00000556571 C1orf64Q8NEQ6 169 aa5.34□□□□□ -1.55
ACTN1-221ENST00000556571 SPRR2GQ9BYE4 73 aa5.33□□□□□ -1.56
ACTN1-221ENST00000556571 CYP4F30PQ9H0H9 118 aa5.33□□□□□ -1.56
ACTN1-221ENST00000556571 C5orf47Q569G3 176 aa5.32□□□□□ -1.56
ACTN1-221ENST00000556571 H0Y9P7 68 aa5.31□□□□□ -1.56
ACTN1-221ENST00000556571 KRTAP2-3P0C7H8 128 aa5.31□□□□□ -1.56
ACTN1-221ENST00000556571 KRTAP2-4Q9BYR9 128 aa5.31□□□□□ -1.56
ACTN1-221ENST00000556571 S4R3F8 94 aa5.3□□□□□ -1.56
ACTN1-221ENST00000556571 MP68P56378 58 aa5.27□□□□□ -1.57
ACTN1-221ENST00000556571 SCGB1A1P11684 91 aa5.26□□□□□ -1.57
ACTN1-221ENST00000556571 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
ACTN1-221ENST00000556571 KRTAP3-1Q9BYR8 98 aa5.26□□□□□ -1.57
ACTN1-221ENST00000556571 K7ERU9 68 aa5.24□□□□□ -1.57
ACTN1-221ENST00000556571 LINC00208Q96KT6 92 aa5.24□□□□□ -1.57
ACTN1-221ENST00000556571 LCA10Q71F78 164 aa5.23□□□□□ -1.57
ACTN1-221ENST00000556571 OCR1Q9BZK8 76 aa5.22□□□□□ -1.57
ACTN1-221ENST00000556571 IMUPQ9GZP8 106 aa5.22□□□□□ -1.57
ACTN1-221ENST00000556571 KLKP1Q107X0 134 aa5.21□□□□□ -1.58
ACTN1-221ENST00000556571 A8MUN3 132 aa5.17□□□□□ -1.58
ACTN1-221ENST00000556571 H3BPC8 53 aa5.17□□□□□ -1.58
ACTN1-221ENST00000556571 SPRR2EP22531 72 aa5.16□□□□□ -1.58
ACTN1-221ENST00000556571 SPRR2BP35325 72 aa5.16□□□□□ -1.58
ACTN1-221ENST00000556571 SPRR2AP35326 72 aa5.16□□□□□ -1.58
ACTN1-221ENST00000556571 SPRR2FQ96RM1 72 aa5.16□□□□□ -1.58
ACTN1-221ENST00000556571 NDUFC1O43677 76 aa5.15□□□□□ -1.59
ACTN1-221ENST00000556571 CRIPTQ9P021 101 aa5.15□□□□□ -1.59
ACTN1-221ENST00000556571 MT-ATP8P03928 68 aa5.14□□□□□ -1.59
ACTN1-221ENST00000556571 KRTAP2-2Q9BYT5 123 aa5.13□□□□□ -1.59
ACTN1-221ENST00000556571 KRTAP2-1Q9BYU5 128 aa5.13□□□□□ -1.59
ACTN1-221ENST00000556571 SMIM20Q8N5G0 67 aa5.12□□□□□ -1.59
ACTN1-221ENST00000556571 KRTAP3-3Q9BYR6 98 aa5.11□□□□□ -1.59
ACTN1-221ENST00000556571 TRAV7A0A075B6U4 112 aa5.07□□□□□ -1.6
ACTN1-221ENST00000556571 LCE1AQ5T7P2 110 aa5.05□□□□□ -1.6
ACTN1-221ENST00000556571 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
ACTN1-221ENST00000556571 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
ACTN1-221ENST00000556571 DMAC1Q96GE9 116 aa5.03□□□□□ -1.6
ACTN1-221ENST00000556571 H0YAA0 97 aa5.01□□□□□ -1.61
ACTN1-221ENST00000556571 SPRR2DP22532 72 aa4.99□□□□□ -1.61
ACTN1-221ENST00000556571 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
ACTN1-221ENST00000556571 MT1XP80297 61 aa4.98□□□□□ -1.61
ACTN1-221ENST00000556571 ACYP2P14621 99 aa4.97□□□□□ -1.61
ACTN1-221ENST00000556571 C20orf197Q8N268 126 aa4.95□□□□□ -1.62
ACTN1-221ENST00000556571 SERP2Q8N6R1 65 aa4.95□□□□□ -1.62
ACTN1-221ENST00000556571 SNURFQ9Y675 71 aa4.95□□□□□ -1.62
ACTN1-221ENST00000556571 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
ACTN1-221ENST00000556571 SPTSSBQ8NFR3 76 aa4.94□□□□□ -1.62
ACTN1-221ENST00000556571 CHKB-CPT1BH3BT56 60 aa4.93□□□□□ -1.62
ACTN1-221ENST00000556571 PLAC4Q8WY50 150 aa4.93□□□□□ -1.62
ACTN1-221ENST00000556571 GPR98Q8WXG9 6306 aa4.91□□□□□ -1.62
ACTN1-221ENST00000556571 LCE3BQ5TA77 95 aa4.89□□□□□ -1.63
ACTN1-221ENST00000556571 KRTAP4-8A0A0G2JLE6 195 aa4.88□□□□□ -1.63
ACTN1-221ENST00000556571 KRTAP4-8Q9BYQ9 185 aa4.88□□□□□ -1.63
ACTN1-221ENST00000556571 R4GN34 69 aa4.88□□□□□ -1.63
ACTN1-221ENST00000556571 SPANXA2-OT1Q8N9U9 137 aa4.87□□□□□ -1.63
ACTN1-221ENST00000556571 P0C880 135 aa4.85□□□□□ -1.63
ACTN1-221ENST00000556571 M0QZ58 72 aa4.84□□□□□ -1.63
ACTN1-221ENST00000556571 COX7CP15954 63 aa4.81□□□□□ -1.64
ACTN1-221ENST00000556571 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
ACTN1-221ENST00000556571 LINC01554Q52M75 96 aa4.78□□□□□ -1.64
ACTN1-221ENST00000556571 ANAPC13Q9BS18 74 aa4.75□□□□□ -1.65
ACTN1-221ENST00000556571 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
ACTN1-221ENST00000556571 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
ACTN1-221ENST00000556571 COA5Q86WW8 74 aa4.74□□□□□ -1.65
ACTN1-221ENST00000556571 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
ACTN1-221ENST00000556571 H7BZZ5 65 aa4.7□□□□□ -1.66
ACTN1-221ENST00000556571 SEC61GP60059 68 aa4.69□□□□□ -1.66
ACTN1-221ENST00000556571 CYSTM1Q9H1C7 97 aa4.66□□□□□ -1.66
ACTN1-221ENST00000556571 SERP1Q9Y6X1 66 aa4.66□□□□□ -1.66
ACTN1-221ENST00000556571 KRTAP4-9Q9BYQ8 210 aa4.63□□□□□ -1.67
ACTN1-221ENST00000556571 CCDC179H3BU77 68 aa4.58□□□□□ -1.68
ACTN1-221ENST00000556571 ATP5EP56381 51 aaPredicted RBP4.56□□□□□ -1.68
ACTN1-221ENST00000556571 KRTAP13-4Q3LI77 160 aa4.55□□□□□ -1.68
ACTN1-221ENST00000556571 A0A1B0GU33 70 aa4.54□□□□□ -1.68
ACTN1-221ENST00000556571 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
ACTN1-221ENST00000556571 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
ACTN1-221ENST00000556571 A0A1B0GU69 56 aa4.53□□□□□ -1.68
ACTN1-221ENST00000556571 A0A0D9SG42 100 aa4.51□□□□□ -1.69
ACTN1-221ENST00000556571 HMCN1Q96RW7 5635 aa4.49□□□□□ -1.69
ACTN1-221ENST00000556571 PCP4P48539 62 aa4.49□□□□□ -1.69
ACTN1-221ENST00000556571 SPATA8Q6RVD6 105 aa4.49□□□□□ -1.69
ACTN1-221ENST00000556571 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
ACTN1-221ENST00000556571 KRTAP19-3Q7Z4W3 81 aa4.48□□□□□ -1.69
ACTN1-221ENST00000556571 TMEM258P61165 79 aa4.46□□□□□ -1.7
ACTN1-221ENST00000556571 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
ACTN1-221ENST00000556571 PRR15LQ9BU68 103 aa4.46□□□□□ -1.7
ACTN1-221ENST00000556571 SPINT4Q6UDR6 99 aa4.45□□□□□ -1.7
ACTN1-221ENST00000556571 MT1EP04732 61 aa4.44□□□□□ -1.7
ACTN1-221ENST00000556571 SMIM26A0A096LP01 95 aa4.43□□□□□ -1.7
ACTN1-221ENST00000556571 AHNAK2Q8IVF2 5795 aa4.42□□□□□ -1.7
ACTN1-221ENST00000556571 LCE4AQ5TA78 99 aa4.41□□□□□ -1.7
ACTN1-221ENST00000556571 MT4P47944 62 aa4.39□□□□□ -1.71
ACTN1-221ENST00000556571 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
ACTN1-221ENST00000556571 LINC01558Q9Y6Z2 57 aa4.36□□□□□ -1.71
ACTN1-221ENST00000556571 MT1GP13640 62 aa4.35□□□□□ -1.71
ACTN1-221ENST00000556571 A8MU10 97 aa4.34□□□□□ -1.71
ACTN1-221ENST00000556571 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms