RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 A8MUN3 132 aa8.41□□□□□ -1.06
TUBB3-211ENST00000556536 S4R3F8 94 aa8.41□□□□□ -1.06
TUBB3-211ENST00000556536 LCA10Q71F78 164 aa8.38□□□□□ -1.07
TUBB3-211ENST00000556536 DMAC1Q96GE9 116 aa8.38□□□□□ -1.07
TUBB3-211ENST00000556536 CYSTM1Q9H1C7 97 aa8.37□□□□□ -1.07
TUBB3-211ENST00000556536 CCDC179H3BU77 68 aa8.35□□□□□ -1.07
TUBB3-211ENST00000556536 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
TUBB3-211ENST00000556536 SPANXA2-OT1Q8N9U9 137 aa8.31□□□□□ -1.08
TUBB3-211ENST00000556536 KRTAP9-8Q9BYQ0 159 aa8.31□□□□□ -1.08
TUBB3-211ENST00000556536 H7BZZ5 65 aa8.28□□□□□ -1.08
TUBB3-211ENST00000556536 NDUFC1O43677 76 aa8.28□□□□□ -1.08
TUBB3-211ENST00000556536 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
TUBB3-211ENST00000556536 USH2AO75445 5202 aa8.27□□□□□ -1.09
TUBB3-211ENST00000556536 SSPOA2VEC9 5147 aa8.25□□□□□ -1.09
TUBB3-211ENST00000556536 MT2AP02795 61 aa8.25□□□□□ -1.09
TUBB3-211ENST00000556536 ACYP2P14621 99 aa8.25□□□□□ -1.09
TUBB3-211ENST00000556536 MT1FP04733 61 aa8.19□□□□□ -1.1
TUBB3-211ENST00000556536 KRTAP10-10P60014 251 aa8.14□□□□□ -1.11
TUBB3-211ENST00000556536 FCGBPQ9Y6R7 5405 aaPredicted RBP8.12□□□□□ -1.11
TUBB3-211ENST00000556536 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
TUBB3-211ENST00000556536 SYNE2Q8WXH0 6885 aaKnown RBP8.09□□□□□ -1.11
TUBB3-211ENST00000556536 COA5Q86WW8 74 aa8.08□□□□□ -1.12
TUBB3-211ENST00000556536 SPTSSBQ8NFR3 76 aa8.03□□□□□ -1.12
TUBB3-211ENST00000556536 KRTAP9-3Q9BYQ3 159 aa8.03□□□□□ -1.12
TUBB3-211ENST00000556536 H0YAA0 97 aa8.02□□□□□ -1.13
TUBB3-211ENST00000556536 ATP5EP56381 51 aaPredicted RBP8□□□□□ -1.13
TUBB3-211ENST00000556536 TMEM258P61165 79 aa8□□□□□ -1.13
TUBB3-211ENST00000556536 ADM2Q7Z4H4 148 aa7.99□□□□□ -1.13
TUBB3-211ENST00000556536 MACF1Q9UPN3 7388 aaKnown RBP7.98□□□□□ -1.13
TUBB3-211ENST00000556536 PCP4P48539 62 aa7.98□□□□□ -1.13
TUBB3-211ENST00000556536 KRTAP19-1Q8IUB9 90 aa7.96□□□□□ -1.14
TUBB3-211ENST00000556536 KRTAP3-2Q9BYR7 98 aa7.93□□□□□ -1.14
TUBB3-211ENST00000556536 LCE2BO14633 110 aa7.9□□□□□ -1.14
TUBB3-211ENST00000556536 P0C880 135 aa7.9□□□□□ -1.14
TUBB3-211ENST00000556536 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
TUBB3-211ENST00000556536 SPRR2GQ9BYE4 73 aa7.82□□□□□ -1.16
TUBB3-211ENST00000556536 SERP1Q9Y6X1 66 aa7.76□□□□□ -1.17
TUBB3-211ENST00000556536 KRTAP19-6Q3LI70 58 aa7.71□□□□□ -1.18
TUBB3-211ENST00000556536 R4GN34 69 aa7.71□□□□□ -1.18
TUBB3-211ENST00000556536 M0QZ58 72 aa7.7□□□□□ -1.18
TUBB3-211ENST00000556536 SEC61GP60059 68 aa7.7□□□□□ -1.18
TUBB3-211ENST00000556536 KRTAP19-8Q3LI54 63 aa7.7□□□□□ -1.18
TUBB3-211ENST00000556536 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
TUBB3-211ENST00000556536 NEBP20929 6669 aa7.65□□□□□ -1.18
TUBB3-211ENST00000556536 MT1BP07438 61 aa7.65□□□□□ -1.18
TUBB3-211ENST00000556536 Q5VV11 94 aa7.64□□□□□ -1.19
TUBB3-211ENST00000556536 A0A1B0GU69 56 aa7.63□□□□□ -1.19
TUBB3-211ENST00000556536 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
TUBB3-211ENST00000556536 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
TUBB3-211ENST00000556536 LINC01554Q52M75 96 aa7.57□□□□□ -1.2
TUBB3-211ENST00000556536 A0A1B0GU33 70 aa7.56□□□□□ -1.2
TUBB3-211ENST00000556536 PRR15LQ9BU68 103 aa7.52□□□□□ -1.21
TUBB3-211ENST00000556536 RPS28P62857 69 aaKnown RBP7.51□□□□□ -1.21
TUBB3-211ENST00000556536 SPATA8Q6RVD6 105 aa7.49□□□□□ -1.21
TUBB3-211ENST00000556536 SMIM26A0A096LP01 95 aa7.48□□□□□ -1.21
TUBB3-211ENST00000556536 Q1T7F1 81 aa7.45□□□□□ -1.22
TUBB3-211ENST00000556536 KRTAP20-1Q3LI63 56 aa7.44□□□□□ -1.22
TUBB3-211ENST00000556536 PLAC4Q8WY50 150 aa7.44□□□□□ -1.22
TUBB3-211ENST00000556536 V9GYY9 64 aa7.43□□□□□ -1.22
TUBB3-211ENST00000556536 MUC12Q9UKN1 5478 aa7.43□□□□□ -1.22
TUBB3-211ENST00000556536 A0A0D9SG42 100 aa7.4□□□□□ -1.22
TUBB3-211ENST00000556536 A6NN06 94 aa7.39□□□□□ -1.23
TUBB3-211ENST00000556536 PSPHP1O15172 72 aa7.38□□□□□ -1.23
TUBB3-211ENST00000556536 KRTAP10-5P60370 271 aa7.35□□□□□ -1.23
TUBB3-211ENST00000556536 A8MU10 97 aa7.33□□□□□ -1.24
TUBB3-211ENST00000556536 UQCR11O14957 56 aa7.3□□□□□ -1.24
TUBB3-211ENST00000556536 MT1XP80297 61 aa7.3□□□□□ -1.24
TUBB3-211ENST00000556536 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
TUBB3-211ENST00000556536 SPINT4Q6UDR6 99 aa7.24□□□□□ -1.25
TUBB3-211ENST00000556536 KRTAP12-2P59991 146 aa7.23□□□□□ -1.25
TUBB3-211ENST00000556536 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
TUBB3-211ENST00000556536 MIR22HGQ0VDD5 57 aa7.2□□□□□ -1.26
TUBB3-211ENST00000556536 CAMK2N1Q7Z7J9 78 aa7.18□□□□□ -1.26
TUBB3-211ENST00000556536 MDN1Q9NU22 5596 aa7.18□□□□□ -1.26
TUBB3-211ENST00000556536 A6NED7 52 aa7.13□□□□□ -1.27
TUBB3-211ENST00000556536 KMT2DO14686 5537 aa7.12□□□□□ -1.27
TUBB3-211ENST00000556536 KRTAP5-9P26371 169 aa7.11□□□□□ -1.27
TUBB3-211ENST00000556536 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
TUBB3-211ENST00000556536 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
TUBB3-211ENST00000556536 KRTAP10-7P60409 375 aaPredicted RBP6.99□□□□□ -1.29
TUBB3-211ENST00000556536 K7ERS5 55 aa6.92□□□□□ -1.3
TUBB3-211ENST00000556536 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
TUBB3-211ENST00000556536 KRTAP10-12P60413 245 aa6.91□□□□□ -1.3
TUBB3-211ENST00000556536 C10orf95Q9H7T3 257 aa6.91□□□□□ -1.3
TUBB3-211ENST00000556536 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
TUBB3-211ENST00000556536 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
TUBB3-211ENST00000556536 GPR98Q8WXG9 6306 aa6.81□□□□□ -1.32
TUBB3-211ENST00000556536 SPRR2EP22531 72 aa6.79□□□□□ -1.32
TUBB3-211ENST00000556536 SPRR2BP35325 72 aa6.79□□□□□ -1.32
TUBB3-211ENST00000556536 SPRR2AP35326 72 aa6.79□□□□□ -1.32
TUBB3-211ENST00000556536 KRTAP2-2Q9BYT5 123 aa6.78□□□□□ -1.32
TUBB3-211ENST00000556536 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
TUBB3-211ENST00000556536 SPRR2FQ96RM1 72 aa6.77□□□□□ -1.33
TUBB3-211ENST00000556536 KRTAP8-1Q8IUC2 63 aa6.75□□□□□ -1.33
TUBB3-211ENST00000556536 TNP1P09430 55 aa6.73□□□□□ -1.33
TUBB3-211ENST00000556536 BRK1Q8WUW1 75 aa6.7□□□□□ -1.34
TUBB3-211ENST00000556536 LCE1AQ5T7P2 110 aa6.62□□□□□ -1.35
TUBB3-211ENST00000556536 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
TUBB3-211ENST00000556536 ROMO1P60602 79 aa6.6□□□□□ -1.35
TUBB3-211ENST00000556536 LCE3AQ5TA76 89 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms