RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 LINC00643Q86TS7 51 aa3.68□□□□□ -1.82
VTI1B-206ENST00000556461 H0Y9P7 68 aa3.67□□□□□ -1.82
VTI1B-206ENST00000556461 UQCRQO14949 82 aa3.67□□□□□ -1.82
VTI1B-206ENST00000556461 MT1BP07438 61 aa3.65□□□□□ -1.83
VTI1B-206ENST00000556461 SPRR2GQ9BYE4 73 aa3.64□□□□□ -1.83
VTI1B-206ENST00000556461 ATOX1O00244 68 aa3.63□□□□□ -1.83
VTI1B-206ENST00000556461 KLKP1Q107X0 134 aa3.63□□□□□ -1.83
VTI1B-206ENST00000556461 KRTAP19-8Q3LI54 63 aa3.63□□□□□ -1.83
VTI1B-206ENST00000556461 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
VTI1B-206ENST00000556461 LINC00208Q96KT6 92 aa3.61□□□□□ -1.83
VTI1B-206ENST00000556461 Q5VV11 94 aa3.6□□□□□ -1.83
VTI1B-206ENST00000556461 NDUFC1O43677 76 aa3.57□□□□□ -1.84
VTI1B-206ENST00000556461 A8MUN3 132 aa3.56□□□□□ -1.84
VTI1B-206ENST00000556461 MP68P56378 58 aa3.56□□□□□ -1.84
VTI1B-206ENST00000556461 IMUPQ9GZP8 106 aa3.56□□□□□ -1.84
VTI1B-206ENST00000556461 A6NN06 94 aa3.55□□□□□ -1.84
VTI1B-206ENST00000556461 J3QR89 54 aa3.55□□□□□ -1.84
VTI1B-206ENST00000556461 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
VTI1B-206ENST00000556461 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
VTI1B-206ENST00000556461 KRTAP6-3Q3LI67 103 aa3.54□□□□□ -1.84
VTI1B-206ENST00000556461 ADM2Q7Z4H4 148 aa3.54□□□□□ -1.84
VTI1B-206ENST00000556461 H0YAA0 97 aa3.53□□□□□ -1.84
VTI1B-206ENST00000556461 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
VTI1B-206ENST00000556461 H3BPC8 53 aa3.51□□□□□ -1.85
VTI1B-206ENST00000556461 MT-ATP8P03928 68 aa3.51□□□□□ -1.85
VTI1B-206ENST00000556461 SCGB1A1P11684 91 aa3.51□□□□□ -1.85
VTI1B-206ENST00000556461 DMAC1Q96GE9 116 aa3.5□□□□□ -1.85
VTI1B-206ENST00000556461 NEBP20929 6669 aa3.5□□□□□ -1.85
VTI1B-206ENST00000556461 KRTAP4-12Q9BQ66 201 aa3.49□□□□□ -1.85
VTI1B-206ENST00000556461 MUC12Q9UKN1 5478 aa3.48□□□□□ -1.85
VTI1B-206ENST00000556461 P0C880 135 aa3.48□□□□□ -1.85
VTI1B-206ENST00000556461 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
VTI1B-206ENST00000556461 K7ERU9 68 aa3.44□□□□□ -1.86
VTI1B-206ENST00000556461 KMT2DO14686 5537 aa3.43□□□□□ -1.86
VTI1B-206ENST00000556461 MT1XP80297 61 aa3.43□□□□□ -1.86
VTI1B-206ENST00000556461 R4GN34 69 aa3.41□□□□□ -1.86
VTI1B-206ENST00000556461 M0QZ58 72 aa3.4□□□□□ -1.87
VTI1B-206ENST00000556461 SMIM20Q8N5G0 67 aa3.4□□□□□ -1.87
VTI1B-206ENST00000556461 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
VTI1B-206ENST00000556461 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
VTI1B-206ENST00000556461 ACYP2P14621 99 aa3.39□□□□□ -1.87
VTI1B-206ENST00000556461 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
VTI1B-206ENST00000556461 C20orf197Q8N268 126 aa3.38□□□□□ -1.87
VTI1B-206ENST00000556461 PLAC4Q8WY50 150 aa3.38□□□□□ -1.87
VTI1B-206ENST00000556461 LCE3BQ5TA77 95 aa3.37□□□□□ -1.87
VTI1B-206ENST00000556461 LINC01554Q52M75 96 aa3.36□□□□□ -1.87
VTI1B-206ENST00000556461 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
VTI1B-206ENST00000556461 PRO2289Q9P1D8 64 aa3.35□□□□□ -1.87
VTI1B-206ENST00000556461 KRTAP19-4Q3LI73 84 aa3.34□□□□□ -1.87
VTI1B-206ENST00000556461 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
VTI1B-206ENST00000556461 SERP2Q8N6R1 65 aa3.32□□□□□ -1.88
VTI1B-206ENST00000556461 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
VTI1B-206ENST00000556461 KRTAP9-4Q9BYQ2 154 aa3.32□□□□□ -1.88
VTI1B-206ENST00000556461 SPTSSBQ8NFR3 76 aa3.31□□□□□ -1.88
VTI1B-206ENST00000556461 KRTAP12-2P59991 146 aa3.3□□□□□ -1.88
VTI1B-206ENST00000556461 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
VTI1B-206ENST00000556461 KRTAP4-8A0A0G2JLE6 195 aa3.29□□□□□ -1.88
VTI1B-206ENST00000556461 SPRR2FQ96RM1 72 aa3.29□□□□□ -1.88
VTI1B-206ENST00000556461 KRTAP10-7P60409 375 aaPredicted RBP3.28□□□□□ -1.88
VTI1B-206ENST00000556461 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
VTI1B-206ENST00000556461 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
VTI1B-206ENST00000556461 KRTAP8-1Q8IUC2 63 aa3.27□□□□□ -1.89
VTI1B-206ENST00000556461 COA5Q86WW8 74 aa3.24□□□□□ -1.89
VTI1B-206ENST00000556461 CYSTM1Q9H1C7 97 aa3.24□□□□□ -1.89
VTI1B-206ENST00000556461 COX7CP15954 63 aa3.23□□□□□ -1.89
VTI1B-206ENST00000556461 SPRR2EP22531 72 aa3.23□□□□□ -1.89
VTI1B-206ENST00000556461 SPRR2BP35325 72 aa3.23□□□□□ -1.89
VTI1B-206ENST00000556461 SPRR2AP35326 72 aa3.23□□□□□ -1.89
VTI1B-206ENST00000556461 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
VTI1B-206ENST00000556461 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
VTI1B-206ENST00000556461 H7BZZ5 65 aa3.19□□□□□ -1.9
VTI1B-206ENST00000556461 KRTAP23-1A1A580 65 aa3.17□□□□□ -1.9
VTI1B-206ENST00000556461 KRTAP2-3P0C7H8 128 aa3.17□□□□□ -1.9
VTI1B-206ENST00000556461 KRTAP2-4Q9BYR9 128 aa3.17□□□□□ -1.9
VTI1B-206ENST00000556461 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
VTI1B-206ENST00000556461 SPATA8Q6RVD6 105 aa3.15□□□□□ -1.91
VTI1B-206ENST00000556461 A0A0D9SG42 100 aa3.14□□□□□ -1.91
VTI1B-206ENST00000556461 SPRR2DP22532 72 aa3.13□□□□□ -1.91
VTI1B-206ENST00000556461 CAMK2N1Q7Z7J9 78 aa3.13□□□□□ -1.91
VTI1B-206ENST00000556461 SERP1Q9Y6X1 66 aa3.13□□□□□ -1.91
VTI1B-206ENST00000556461 SEC61GP60059 68 aa3.12□□□□□ -1.91
VTI1B-206ENST00000556461 A0A1B0GU33 70 aa3.11□□□□□ -1.91
VTI1B-206ENST00000556461 CCDC179H3BU77 68 aa3.1□□□□□ -1.91
VTI1B-206ENST00000556461 ANAPC13Q9BS18 74 aa3.1□□□□□ -1.91
VTI1B-206ENST00000556461 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
VTI1B-206ENST00000556461 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
VTI1B-206ENST00000556461 KRTAP4-7Q9BYR0 210 aa3.08□□□□□ -1.92
VTI1B-206ENST00000556461 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
VTI1B-206ENST00000556461 KRTAP2-1Q9BYU5 128 aa3.08□□□□□ -1.92
VTI1B-206ENST00000556461 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
VTI1B-206ENST00000556461 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
VTI1B-206ENST00000556461 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
VTI1B-206ENST00000556461 A0A1B0GU69 56 aa3.05□□□□□ -1.92
VTI1B-206ENST00000556461 A8MU10 97 aa3.05□□□□□ -1.92
VTI1B-206ENST00000556461 MT1EP04732 61 aa3.03□□□□□ -1.92
VTI1B-206ENST00000556461 SMIM26A0A096LP01 95 aa3□□□□□ -1.93
VTI1B-206ENST00000556461 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
VTI1B-206ENST00000556461 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
VTI1B-206ENST00000556461 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
VTI1B-206ENST00000556461 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms