RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 K7ERU9 68 aa6.96□□□□□ -1.3
ACTN1-217ENST00000556203 A8MUN3 132 aa6.94□□□□□ -1.3
ACTN1-217ENST00000556203 MT-ATP8P03928 68 aa6.94□□□□□ -1.3
ACTN1-217ENST00000556203 FCGBPQ9Y6R7 5405 aaPredicted RBP6.94□□□□□ -1.3
ACTN1-217ENST00000556203 H3BPC8 53 aa6.93□□□□□ -1.3
ACTN1-217ENST00000556203 IMUPQ9GZP8 106 aa6.93□□□□□ -1.3
ACTN1-217ENST00000556203 NDUFC1O43677 76 aa6.91□□□□□ -1.3
ACTN1-217ENST00000556203 KRTAP19-6Q3LI70 58 aa6.9□□□□□ -1.3
ACTN1-217ENST00000556203 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
ACTN1-217ENST00000556203 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
ACTN1-217ENST00000556203 SMIM20Q8N5G0 67 aa6.81□□□□□ -1.32
ACTN1-217ENST00000556203 DMAC1Q96GE9 116 aa6.8□□□□□ -1.32
ACTN1-217ENST00000556203 TRAV7A0A075B6U4 112 aa6.79□□□□□ -1.32
ACTN1-217ENST00000556203 H0YAA0 97 aa6.79□□□□□ -1.32
ACTN1-217ENST00000556203 KRTAP19-8Q3LI54 63 aa6.78□□□□□ -1.32
ACTN1-217ENST00000556203 Q5VV11 94 aa6.78□□□□□ -1.32
ACTN1-217ENST00000556203 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
ACTN1-217ENST00000556203 MT1BP07438 61 aa6.77□□□□□ -1.33
ACTN1-217ENST00000556203 MACF1Q9UPN3 7388 aaKnown RBP6.75□□□□□ -1.33
ACTN1-217ENST00000556203 ADM2Q7Z4H4 148 aa6.75□□□□□ -1.33
ACTN1-217ENST00000556203 KRTAP9-7A8MTY7 169 aa6.74□□□□□ -1.33
ACTN1-217ENST00000556203 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
ACTN1-217ENST00000556203 SNURFQ9Y675 71 aa6.66□□□□□ -1.34
ACTN1-217ENST00000556203 A6NN06 94 aa6.65□□□□□ -1.34
ACTN1-217ENST00000556203 ACYP2P14621 99 aa6.65□□□□□ -1.34
ACTN1-217ENST00000556203 SERP2Q8N6R1 65 aa6.62□□□□□ -1.35
ACTN1-217ENST00000556203 P0C880 135 aa6.6□□□□□ -1.35
ACTN1-217ENST00000556203 C20orf197Q8N268 126 aa6.6□□□□□ -1.35
ACTN1-217ENST00000556203 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
ACTN1-217ENST00000556203 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
ACTN1-217ENST00000556203 CHKB-CPT1BH3BT56 60 aa6.56□□□□□ -1.36
ACTN1-217ENST00000556203 R4GN34 69 aa6.56□□□□□ -1.36
ACTN1-217ENST00000556203 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
ACTN1-217ENST00000556203 SPANXA2-OT1Q8N9U9 137 aa6.54□□□□□ -1.36
ACTN1-217ENST00000556203 M0QZ58 72 aa6.53□□□□□ -1.36
ACTN1-217ENST00000556203 KRTAP6-3Q3LI67 103 aa6.46□□□□□ -1.38
ACTN1-217ENST00000556203 PLAC4Q8WY50 150 aa6.46□□□□□ -1.38
ACTN1-217ENST00000556203 COX7CP15954 63 aa6.45□□□□□ -1.38
ACTN1-217ENST00000556203 LINC01554Q52M75 96 aa6.43□□□□□ -1.38
ACTN1-217ENST00000556203 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
ACTN1-217ENST00000556203 MT1XP80297 61 aa6.38□□□□□ -1.39
ACTN1-217ENST00000556203 COA5Q86WW8 74 aa6.37□□□□□ -1.39
ACTN1-217ENST00000556203 CYSTM1Q9H1C7 97 aa6.35□□□□□ -1.39
ACTN1-217ENST00000556203 H7BZZ5 65 aa6.33□□□□□ -1.4
ACTN1-217ENST00000556203 ANAPC13Q9BS18 74 aa6.3□□□□□ -1.4
ACTN1-217ENST00000556203 NEBP20929 6669 aa6.29□□□□□ -1.4
ACTN1-217ENST00000556203 MUC12Q9UKN1 5478 aa6.26□□□□□ -1.41
ACTN1-217ENST00000556203 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
ACTN1-217ENST00000556203 KRTAP5-9P26371 169 aa6.22□□□□□ -1.41
ACTN1-217ENST00000556203 KMT2DO14686 5537 aa6.22□□□□□ -1.41
ACTN1-217ENST00000556203 SEC61GP60059 68 aa6.21□□□□□ -1.42
ACTN1-217ENST00000556203 KRTAP12-2P59991 146 aa6.19□□□□□ -1.42
ACTN1-217ENST00000556203 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
ACTN1-217ENST00000556203 CCDC179H3BU77 68 aa6.17□□□□□ -1.42
ACTN1-217ENST00000556203 KRTAP8-1Q8IUC2 63 aa6.11□□□□□ -1.43
ACTN1-217ENST00000556203 KRTAP10-7P60409 375 aaPredicted RBP6.1□□□□□ -1.43
ACTN1-217ENST00000556203 SPRR2FQ96RM1 72 aa6.09□□□□□ -1.43
ACTN1-217ENST00000556203 MDN1Q9NU22 5596 aa6.08□□□□□ -1.44
ACTN1-217ENST00000556203 A0A1B0GU33 70 aa6.08□□□□□ -1.44
ACTN1-217ENST00000556203 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
ACTN1-217ENST00000556203 A0A0D9SG42 100 aa6.07□□□□□ -1.44
ACTN1-217ENST00000556203 KRTAP4-8A0A0G2JLE6 195 aa6.07□□□□□ -1.44
ACTN1-217ENST00000556203 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
ACTN1-217ENST00000556203 CAMK2N1Q7Z7J9 78 aa6.06□□□□□ -1.44
ACTN1-217ENST00000556203 A0A1B0GU69 56 aa6.05□□□□□ -1.44
ACTN1-217ENST00000556203 KRTAP10-12P60413 245 aa6.05□□□□□ -1.44
ACTN1-217ENST00000556203 ATP5EP56381 51 aaPredicted RBP6.04□□□□□ -1.44
ACTN1-217ENST00000556203 SPINT4Q6UDR6 99 aa5.98□□□□□ -1.45
ACTN1-217ENST00000556203 SPRR2EP22531 72 aa5.97□□□□□ -1.45
ACTN1-217ENST00000556203 SPRR2BP35325 72 aa5.97□□□□□ -1.45
ACTN1-217ENST00000556203 SPRR2AP35326 72 aa5.97□□□□□ -1.45
ACTN1-217ENST00000556203 TMEM258P61165 79 aa5.94□□□□□ -1.46
ACTN1-217ENST00000556203 KRTAP12-1P59990 96 aa5.93□□□□□ -1.46
ACTN1-217ENST00000556203 KRTAP20-1Q3LI63 56 aa5.93□□□□□ -1.46
ACTN1-217ENST00000556203 SMIM26A0A096LP01 95 aa5.91□□□□□ -1.46
ACTN1-217ENST00000556203 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
ACTN1-217ENST00000556203 PRR15LQ9BU68 103 aa5.89□□□□□ -1.47
ACTN1-217ENST00000556203 A8MU10 97 aa5.88□□□□□ -1.47
ACTN1-217ENST00000556203 LINC01558Q9Y6Z2 57 aa5.87□□□□□ -1.47
ACTN1-217ENST00000556203 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
ACTN1-217ENST00000556203 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
ACTN1-217ENST00000556203 SPRR2DP22532 72 aa5.77□□□□□ -1.49
ACTN1-217ENST00000556203 KRTAP19-7Q3SYF9 63 aa5.7□□□□□ -1.5
ACTN1-217ENST00000556203 UQCR11O14957 56 aa5.69□□□□□ -1.5
ACTN1-217ENST00000556203 C10orf95Q9H7T3 257 aa5.66□□□□□ -1.5
ACTN1-217ENST00000556203 MT1EP04732 61 aa5.65□□□□□ -1.5
ACTN1-217ENST00000556203 KRTAP2-2Q9BYT5 123 aa5.63□□□□□ -1.51
ACTN1-217ENST00000556203 KRTAP2-1Q9BYU5 128 aa5.63□□□□□ -1.51
ACTN1-217ENST00000556203 TNP1P09430 55 aa5.61□□□□□ -1.51
ACTN1-217ENST00000556203 KRTAP19-5Q3LI72 72 aa5.61□□□□□ -1.51
ACTN1-217ENST00000556203 MIR22HGQ0VDD5 57 aa5.59□□□□□ -1.51
ACTN1-217ENST00000556203 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
ACTN1-217ENST00000556203 V9GYY9 64 aa5.59□□□□□ -1.51
ACTN1-217ENST00000556203 PSPHP1O15172 72 aa5.57□□□□□ -1.52
ACTN1-217ENST00000556203 KRTAP19-3Q7Z4W3 81 aa5.57□□□□□ -1.52
ACTN1-217ENST00000556203 Q1T7F1 81 aa5.56□□□□□ -1.52
ACTN1-217ENST00000556203 LCE5AQ5TCM9 118 aa5.56□□□□□ -1.52
ACTN1-217ENST00000556203 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
ACTN1-217ENST00000556203 K7ERS5 55 aa5.45□□□□□ -1.54
ACTN1-217ENST00000556203 MT1GP13640 62 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms