RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 CSAG1Q6PB30 78 aa6.32□□□□□ -1.4
PCNX4-209ENST00000555569 LCA10Q71F78 164 aa6.3□□□□□ -1.4
PCNX4-209ENST00000555569 PCP4L1A6NKN8 68 aa6.27□□□□□ -1.41
PCNX4-209ENST00000555569 SYNE2Q8WXH0 6885 aaKnown RBP6.26□□□□□ -1.41
PCNX4-209ENST00000555569 CYP4F30PQ9H0H9 118 aa6.25□□□□□ -1.41
PCNX4-209ENST00000555569 TRAV22A0A0B4J277 110 aa6.22□□□□□ -1.41
PCNX4-209ENST00000555569 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
PCNX4-209ENST00000555569 MT1BP07438 61 aa6.21□□□□□ -1.42
PCNX4-209ENST00000555569 KRTAP6-3Q3LI67 103 aa6.21□□□□□ -1.42
PCNX4-209ENST00000555569 Q5VV11 94 aa6.21□□□□□ -1.42
PCNX4-209ENST00000555569 LOC101927531A0A1B0GV80 90 aa6.2□□□□□ -1.42
PCNX4-209ENST00000555569 ACYP1P07311 99 aa6.2□□□□□ -1.42
PCNX4-209ENST00000555569 KRTAP19-8Q3LI54 63 aa6.2□□□□□ -1.42
PCNX4-209ENST00000555569 KLKP1Q107X0 134 aa6.19□□□□□ -1.42
PCNX4-209ENST00000555569 A6NN06 94 aa6.17□□□□□ -1.42
PCNX4-209ENST00000555569 ATP5EP2Q5VTU8 51 aa6.17□□□□□ -1.42
PCNX4-209ENST00000555569 FAM240AA0A1B0GVK7 77 aa6.16□□□□□ -1.42
PCNX4-209ENST00000555569 A0A087WVE0 104 aa6.15□□□□□ -1.42
PCNX4-209ENST00000555569 HIST1H4AP62805 103 aaKnown RBP6.15□□□□□ -1.42
PCNX4-209ENST00000555569 UQCRQO14949 82 aa6.14□□□□□ -1.43
PCNX4-209ENST00000555569 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
PCNX4-209ENST00000555569 H0Y9P7 68 aa6.12□□□□□ -1.43
PCNX4-209ENST00000555569 ATOX1O00244 68 aa6.11□□□□□ -1.43
PCNX4-209ENST00000555569 KRTAP10-5P60370 271 aa6.09□□□□□ -1.43
PCNX4-209ENST00000555569 IMUPQ9GZP8 106 aa6.09□□□□□ -1.43
PCNX4-209ENST00000555569 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
PCNX4-209ENST00000555569 NDUFC1O43677 76 aa6.07□□□□□ -1.44
PCNX4-209ENST00000555569 LINC00643Q86TS7 51 aa6.06□□□□□ -1.44
PCNX4-209ENST00000555569 H0YAA0 97 aa6.03□□□□□ -1.44
PCNX4-209ENST00000555569 A8MUN3 132 aa6.02□□□□□ -1.45
PCNX4-209ENST00000555569 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
PCNX4-209ENST00000555569 MP68P56378 58 aa5.97□□□□□ -1.45
PCNX4-209ENST00000555569 ADM2Q7Z4H4 148 aa5.97□□□□□ -1.45
PCNX4-209ENST00000555569 OCR1Q9BZK8 76 aa5.97□□□□□ -1.45
PCNX4-209ENST00000555569 A0A1B0GV90 55 aa5.92□□□□□ -1.46
PCNX4-209ENST00000555569 NEBP20929 6669 aa5.9□□□□□ -1.46
PCNX4-209ENST00000555569 KRTAP5-9P26371 169 aa5.89□□□□□ -1.47
PCNX4-209ENST00000555569 H3BPC8 53 aa5.88□□□□□ -1.47
PCNX4-209ENST00000555569 MUC12Q9UKN1 5478 aa5.84□□□□□ -1.47
PCNX4-209ENST00000555569 J3QR89 54 aa5.84□□□□□ -1.47
PCNX4-209ENST00000555569 DMAC1Q96GE9 116 aa5.83□□□□□ -1.48
PCNX4-209ENST00000555569 PRO2289Q9P1D8 64 aa5.83□□□□□ -1.48
PCNX4-209ENST00000555569 P0C880 135 aa5.82□□□□□ -1.48
PCNX4-209ENST00000555569 SCGB1A1P11684 91 aa5.82□□□□□ -1.48
PCNX4-209ENST00000555569 C20orf197Q8N268 126 aa5.82□□□□□ -1.48
PCNX4-209ENST00000555569 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
PCNX4-209ENST00000555569 R4GN34 69 aa5.82□□□□□ -1.48
PCNX4-209ENST00000555569 MT1XP80297 61 aa5.8□□□□□ -1.48
PCNX4-209ENST00000555569 H3BS24 57 aa5.79□□□□□ -1.48
PCNX4-209ENST00000555569 KRTAP20-1Q3LI63 56 aa5.79□□□□□ -1.48
PCNX4-209ENST00000555569 M0QZ58 72 aa5.77□□□□□ -1.49
PCNX4-209ENST00000555569 KMT2DO14686 5537 aa5.75□□□□□ -1.49
PCNX4-209ENST00000555569 TRAV7A0A075B6U4 112 aa5.71□□□□□ -1.5
PCNX4-209ENST00000555569 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.5
PCNX4-209ENST00000555569 LINC01554Q52M75 96 aa5.69□□□□□ -1.5
PCNX4-209ENST00000555569 ACYP2P14621 99 aa5.68□□□□□ -1.5
PCNX4-209ENST00000555569 KRTAP12-2P59991 146 aa5.68□□□□□ -1.5
PCNX4-209ENST00000555569 MDN1Q9NU22 5596 aa5.66□□□□□ -1.5
PCNX4-209ENST00000555569 KRTAP8-1Q8IUC2 63 aa5.66□□□□□ -1.5
PCNX4-209ENST00000555569 MT-ATP8P03928 68 aa5.65□□□□□ -1.5
PCNX4-209ENST00000555569 SPRR2EP22531 72 aa5.64□□□□□ -1.51
PCNX4-209ENST00000555569 SPRR2BP35325 72 aa5.64□□□□□ -1.51
PCNX4-209ENST00000555569 SPRR2AP35326 72 aa5.64□□□□□ -1.51
PCNX4-209ENST00000555569 SMIM20Q8N5G0 67 aa5.64□□□□□ -1.51
PCNX4-209ENST00000555569 SPTSSBQ8NFR3 76 aa5.64□□□□□ -1.51
PCNX4-209ENST00000555569 KRTAP2-3P0C7H8 128 aa5.61□□□□□ -1.51
PCNX4-209ENST00000555569 KRTAP2-4Q9BYR9 128 aa5.61□□□□□ -1.51
PCNX4-209ENST00000555569 CHKB-CPT1BH3BT56 60 aa5.58□□□□□ -1.52
PCNX4-209ENST00000555569 K7ERU9 68 aa5.58□□□□□ -1.52
PCNX4-209ENST00000555569 LCE1AQ5T7P2 110 aa5.56□□□□□ -1.52
PCNX4-209ENST00000555569 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
PCNX4-209ENST00000555569 SNURFQ9Y675 71 aa5.54□□□□□ -1.52
PCNX4-209ENST00000555569 KRTAP10-12P60413 245 aa5.51□□□□□ -1.53
PCNX4-209ENST00000555569 SPANXA2-OT1Q8N9U9 137 aa5.48□□□□□ -1.53
PCNX4-209ENST00000555569 SPRR2DP22532 72 aa5.45□□□□□ -1.54
PCNX4-209ENST00000555569 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
PCNX4-209ENST00000555569 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
PCNX4-209ENST00000555569 SERP2Q8N6R1 65 aa5.42□□□□□ -1.54
PCNX4-209ENST00000555569 KRTAP13-4Q3LI77 160 aa5.41□□□□□ -1.54
PCNX4-209ENST00000555569 CAMK2N1Q7Z7J9 78 aa5.34□□□□□ -1.55
PCNX4-209ENST00000555569 COA5Q86WW8 74 aa5.34□□□□□ -1.55
PCNX4-209ENST00000555569 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.32□□□□□ -1.56
PCNX4-209ENST00000555569 SEC61GP60059 68 aa5.28□□□□□ -1.56
PCNX4-209ENST00000555569 SERP1Q9Y6X1 66 aa5.27□□□□□ -1.57
PCNX4-209ENST00000555569 A0A0D9SG42 100 aa5.24□□□□□ -1.57
PCNX4-209ENST00000555569 COX7CP15954 63 aa5.23□□□□□ -1.57
PCNX4-209ENST00000555569 SPATA8Q6RVD6 105 aa5.21□□□□□ -1.58
PCNX4-209ENST00000555569 A0A1B0GU33 70 aa5.19□□□□□ -1.58
PCNX4-209ENST00000555569 KRTAP19-7Q3SYF9 63 aa5.18□□□□□ -1.58
PCNX4-209ENST00000555569 H7BZZ5 65 aa5.17□□□□□ -1.58
PCNX4-209ENST00000555569 SPINT4Q6UDR6 99 aa5.17□□□□□ -1.58
PCNX4-209ENST00000555569 MT1EP04732 61 aa5.15□□□□□ -1.59
PCNX4-209ENST00000555569 CYSTM1Q9H1C7 97 aa5.15□□□□□ -1.59
PCNX4-209ENST00000555569 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
PCNX4-209ENST00000555569 KRTAP19-3Q7Z4W3 81 aa5.12□□□□□ -1.59
PCNX4-209ENST00000555569 DSTQ03001 7570 aaKnown RBP5.07□□□□□ -1.6
PCNX4-209ENST00000555569 A0A1B0GU69 56 aa5.06□□□□□ -1.6
PCNX4-209ENST00000555569 SMIM26A0A096LP01 95 aa5.05□□□□□ -1.6
PCNX4-209ENST00000555569 SVIPQ8NHG7 77 aa5.05□□□□□ -1.6
PCNX4-209ENST00000555569 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms