RNA–Protein interactions for RNA: ENST00000555155.5

RCCD1-203, Transcript of RCC1 domain containing 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene RCCD1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-203ENST00000555155 H1FX-AS1Q4G0G2 97 aa11.98□□□□□ -0.49
RCCD1-203ENST00000555155 LCA10Q71F78 164 aa11.95□□□□□ -0.5
RCCD1-203ENST00000555155 S4R3F8 94 aa11.95□□□□□ -0.5
RCCD1-203ENST00000555155 PSPHP1O15172 72 aa11.93□□□□□ -0.5
RCCD1-203ENST00000555155 V9GYY9 64 aa11.91□□□□□ -0.5
RCCD1-203ENST00000555155 SPTSSBQ8NFR3 76 aa11.89□□□□□ -0.51
RCCD1-203ENST00000555155 PRR15LQ9BU68 103 aa11.89□□□□□ -0.51
RCCD1-203ENST00000555155 LINC01558Q9Y6Z2 57 aa11.89□□□□□ -0.51
RCCD1-203ENST00000555155 KRTAP3-3Q9BYR6 98 aa11.88□□□□□ -0.51
RCCD1-203ENST00000555155 KRTAP19-2Q3LHN2 52 aa11.84□□□□□ -0.51
RCCD1-203ENST00000555155 FAT4Q6V0I7 4981 aa11.78□□□□□ -0.52
RCCD1-203ENST00000555155 Q5VV11 94 aa11.75□□□□□ -0.53
RCCD1-203ENST00000555155 A0A1B0GU69 56 aa11.74□□□□□ -0.53
RCCD1-203ENST00000555155 LCE2CQ5TA81 110 aa11.72□□□□□ -0.53
RCCD1-203ENST00000555155 FLGP20930 4061 aaPredicted RBP11.64□□□□□ -0.55
RCCD1-203ENST00000555155 SEC61GP60059 68 aa11.63□□□□□ -0.55
RCCD1-203ENST00000555155 CSAG1Q6PB30 78 aa11.63□□□□□ -0.55
RCCD1-203ENST00000555155 A6NED7 52 aa11.51□□□□□ -0.57
RCCD1-203ENST00000555155 MT1HP80294 61 aa11.49□□□□□ -0.57
RCCD1-203ENST00000555155 ADM2Q7Z4H4 148 aa11.46□□□□□ -0.58
RCCD1-203ENST00000555155 KRTAP3-2Q9BYR7 98 aa11.46□□□□□ -0.58
RCCD1-203ENST00000555155 BRK1Q8WUW1 75 aa11.44□□□□□ -0.58
RCCD1-203ENST00000555155 KRTAP10-6P60371 365 aaPredicted RBP11.44□□□□□ -0.58
RCCD1-203ENST00000555155 P0C880 135 aa11.42□□□□□ -0.58
RCCD1-203ENST00000555155 A8MU10 97 aa11.38□□□□□ -0.59
RCCD1-203ENST00000555155 A0A1B0GU33 70 aa11.37□□□□□ -0.59
RCCD1-203ENST00000555155 UQCR11O14957 56 aa11.35□□□□□ -0.59
RCCD1-203ENST00000555155 M0R2T5 61 aa11.34□□□□□ -0.59
RCCD1-203ENST00000555155 LCE2AQ5TA79 106 aaPredicted RBP11.31□□□□□ -0.6
RCCD1-203ENST00000555155 H0YAA0 97 aa11.29□□□□□ -0.6
RCCD1-203ENST00000555155 SPATA8Q6RVD6 105 aa11.27□□□□□ -0.6
RCCD1-203ENST00000555155 MIR22HGQ0VDD5 57 aa11.27□□□□□ -0.61
RCCD1-203ENST00000555155 CDC42SE1Q9NRR8 79 aa11.25□□□□□ -0.61
RCCD1-203ENST00000555155 KRTAP13-4Q3LI77 160 aa11.21□□□□□ -0.62
RCCD1-203ENST00000555155 LORP23490 312 aaPredicted RBP11.13□□□□□ -0.63
RCCD1-203ENST00000555155 PRO0628Q9UI54 55 aa11.1□□□□□ -0.63
RCCD1-203ENST00000555155 A0A0D9SG42 100 aa11.05□□□□□ -0.64
RCCD1-203ENST00000555155 M0QZ58 72 aa11.03□□□□□ -0.64
RCCD1-203ENST00000555155 KRTAP9-8Q9BYQ0 159 aa11.02□□□□□ -0.64
RCCD1-203ENST00000555155 R4GN34 69 aa11.01□□□□□ -0.65
RCCD1-203ENST00000555155 MT2AP02795 61 aa10.95□□□□□ -0.66
RCCD1-203ENST00000555155 LINC01554Q52M75 96 aa10.92□□□□□ -0.66
RCCD1-203ENST00000555155 MT1FP04733 61 aa10.89□□□□□ -0.67
RCCD1-203ENST00000555155 KRTAP10-10P60014 251 aa10.83□□□□□ -0.68
RCCD1-203ENST00000555155 PMAIP1Q13794 54 aa10.77□□□□□ -0.69
RCCD1-203ENST00000555155 CRIPTQ9P021 101 aa10.77□□□□□ -0.69
RCCD1-203ENST00000555155 SPINT4Q6UDR6 99 aa10.75□□□□□ -0.69
RCCD1-203ENST00000555155 KRTAP12-2P59991 146 aa10.74□□□□□ -0.69
RCCD1-203ENST00000555155 KRTAP12-1P59990 96 aa10.72□□□□□ -0.69
RCCD1-203ENST00000555155 A6NN06 94 aa10.69□□□□□ -0.7
RCCD1-203ENST00000555155 K7ERS5 55 aa10.69□□□□□ -0.7
RCCD1-203ENST00000555155 KRTAP19-1Q8IUB9 90 aa10.64□□□□□ -0.71
RCCD1-203ENST00000555155 KRTAP9-3Q9BYQ3 159 aa10.64□□□□□ -0.71
RCCD1-203ENST00000555155 SPRR2GQ9BYE4 73 aa10.61□□□□□ -0.71
RCCD1-203ENST00000555155 LCE2BO14633 110 aa10.42□□□□□ -0.74
RCCD1-203ENST00000555155 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
RCCD1-203ENST00000555155 CAMK2N1Q7Z7J9 78 aa10.34□□□□□ -0.75
RCCD1-203ENST00000555155 KRTAP19-8Q3LI54 63 aa10.32□□□□□ -0.76
RCCD1-203ENST00000555155 PLAC4Q8WY50 150 aa10.32□□□□□ -0.76
RCCD1-203ENST00000555155 ROMO1P60602 79 aa10.3□□□□□ -0.76
RCCD1-203ENST00000555155 KTN1-AS1Q86SY8 53 aa10.29□□□□□ -0.76
RCCD1-203ENST00000555155 USH2AO75445 5202 aa10.28□□□□□ -0.76
RCCD1-203ENST00000555155 MT1BP07438 61 aa10.25□□□□□ -0.77
RCCD1-203ENST00000555155 KRTAP9-2Q9BYQ4 174 aa10.21□□□□□ -0.78
RCCD1-203ENST00000555155 PRAC1Q96KF2 57 aa10.19□□□□□ -0.78
RCCD1-203ENST00000555155 FSIP2Q5CZC0 6907 aa10.18□□□□□ -0.78
RCCD1-203ENST00000555155 C10orf95Q9H7T3 257 aa10.17□□□□□ -0.78
RCCD1-203ENST00000555155 SSPOA2VEC9 5147 aa10.03□□□□□ -0.8
RCCD1-203ENST00000555155 MT1XP80297 61 aa9.93□□□□□ -0.82
RCCD1-203ENST00000555155 KRTAP10-5P60370 271 aa9.92□□□□□ -0.82
RCCD1-203ENST00000555155 KRTAP25-1Q3LHN0 102 aa9.83□□□□□ -0.84
RCCD1-203ENST00000555155 KRTAP19-6Q3LI70 58 aa9.82□□□□□ -0.84
RCCD1-203ENST00000555155 TNP1P09430 55 aa9.79□□□□□ -0.84
RCCD1-203ENST00000555155 CRCT1Q9UGL9 99 aa9.78□□□□□ -0.84
RCCD1-203ENST00000555155 PRO2289Q9P1D8 64 aa9.74□□□□□ -0.85
RCCD1-203ENST00000555155 FCGBPQ9Y6R7 5405 aaPredicted RBP9.65□□□□□ -0.86
RCCD1-203ENST00000555155 KRTAP10-7P60409 375 aaPredicted RBP9.59□□□□□ -0.87
RCCD1-203ENST00000555155 KRTAP9-6A0A140TA67 174 aa9.53□□□□□ -0.88
RCCD1-203ENST00000555155 LCE3AQ5TA76 89 aa9.45□□□□□ -0.9
RCCD1-203ENST00000555155 KRTAP10-12P60413 245 aa9.43□□□□□ -0.9
RCCD1-203ENST00000555155 PP632Q6XCG6 107 aa9.42□□□□□ -0.9
RCCD1-203ENST00000555155 KMT2DO14686 5537 aa9.36□□□□□ -0.91
RCCD1-203ENST00000555155 KRTAP23-1A1A580 65 aa9.36□□□□□ -0.91
RCCD1-203ENST00000555155 MACF1Q9UPN3 7388 aaKnown RBP9.27□□□□□ -0.93
RCCD1-203ENST00000555155 KRTAP4-8A0A0G2JLE6 195 aa9.23□□□□□ -0.93
RCCD1-203ENST00000555155 KRTAP4-8Q9BYQ9 185 aa9.23□□□□□ -0.93
RCCD1-203ENST00000555155 KRTAP8-1Q8IUC2 63 aa9.15□□□□□ -0.95
RCCD1-203ENST00000555155 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.07□□□□□ -0.96
RCCD1-203ENST00000555155 SYNE2Q8WXH0 6885 aaKnown RBP9.04□□□□□ -0.96
RCCD1-203ENST00000555155 KRTAP12-3P60328 96 aa9.02□□□□□ -0.96
RCCD1-203ENST00000555155 KRTAP19-5Q3LI72 72 aa9.02□□□□□ -0.96
RCCD1-203ENST00000555155 KRTAP19-7Q3SYF9 63 aa8.85□□□□□ -0.99
RCCD1-203ENST00000555155 KRTAP15-1Q3LI76 137 aa8.83□□□□□ -1
RCCD1-203ENST00000555155 KRTAP6-3Q3LI67 103 aa8.72□□□□□ -1.01
RCCD1-203ENST00000555155 SPRR2FQ96RM1 72 aa8.72□□□□□ -1.01
RCCD1-203ENST00000555155 KRTAP5-9P26371 169 aa8.71□□□□□ -1.01
RCCD1-203ENST00000555155 MT1EP04732 61 aa8.69□□□□□ -1.02
RCCD1-203ENST00000555155 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
RCCD1-203ENST00000555155 MUC12Q9UKN1 5478 aa8.67□□□□□ -1.02
RCCD1-203ENST00000555155 MDN1Q9NU22 5596 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms