RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 S4R3F8 94 aa8.91□□□□□ -0.98
PPP4R3A-203ENST00000554511 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
PPP4R3A-203ENST00000554511 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
PPP4R3A-203ENST00000554511 ACYP2P14621 99 aa8.86□□□□□ -0.99
PPP4R3A-203ENST00000554511 CCDC179H3BU77 68 aa8.83□□□□□ -1
PPP4R3A-203ENST00000554511 CSAG1Q6PB30 78 aa8.82□□□□□ -1
PPP4R3A-203ENST00000554511 LCA10Q71F78 164 aa8.81□□□□□ -1
PPP4R3A-203ENST00000554511 H7BZZ5 65 aa8.79□□□□□ -1
PPP4R3A-203ENST00000554511 CYSTM1Q9H1C7 97 aa8.74□□□□□ -1.01
PPP4R3A-203ENST00000554511 CHKB-CPT1BH3BT56 60 aa8.71□□□□□ -1.02
PPP4R3A-203ENST00000554511 SPTSSBQ8NFR3 76 aa8.7□□□□□ -1.02
PPP4R3A-203ENST00000554511 KRTAP9-8Q9BYQ0 159 aa8.7□□□□□ -1.02
PPP4R3A-203ENST00000554511 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
PPP4R3A-203ENST00000554511 ATP5EP56381 51 aaPredicted RBP8.66□□□□□ -1.02
PPP4R3A-203ENST00000554511 USH2AO75445 5202 aa8.63□□□□□ -1.03
PPP4R3A-203ENST00000554511 SSPOA2VEC9 5147 aa8.62□□□□□ -1.03
PPP4R3A-203ENST00000554511 TMEM258P61165 79 aa8.61□□□□□ -1.03
PPP4R3A-203ENST00000554511 COA5Q86WW8 74 aa8.59□□□□□ -1.03
PPP4R3A-203ENST00000554511 PCP4P48539 62 aa8.58□□□□□ -1.04
PPP4R3A-203ENST00000554511 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
PPP4R3A-203ENST00000554511 MT2AP02795 61 aa8.56□□□□□ -1.04
PPP4R3A-203ENST00000554511 KRTAP10-10P60014 251 aa8.56□□□□□ -1.04
PPP4R3A-203ENST00000554511 KRTAP9-7A8MTY7 169 aa8.53□□□□□ -1.04
PPP4R3A-203ENST00000554511 H0YAA0 97 aa8.53□□□□□ -1.04
PPP4R3A-203ENST00000554511 MT1FP04733 61 aa8.48□□□□□ -1.05
PPP4R3A-203ENST00000554511 LCE2BO14633 110 aa8.45□□□□□ -1.06
PPP4R3A-203ENST00000554511 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
PPP4R3A-203ENST00000554511 KRTAP9-3Q9BYQ3 159 aa8.43□□□□□ -1.06
PPP4R3A-203ENST00000554511 FCGBPQ9Y6R7 5405 aaPredicted RBP8.42□□□□□ -1.06
PPP4R3A-203ENST00000554511 KRTAP19-1Q8IUB9 90 aa8.4□□□□□ -1.06
PPP4R3A-203ENST00000554511 CRIPTQ9P021 101 aa8.39□□□□□ -1.07
PPP4R3A-203ENST00000554511 SEC61GP60059 68 aa8.35□□□□□ -1.07
PPP4R3A-203ENST00000554511 SERP1Q9Y6X1 66 aa8.34□□□□□ -1.07
PPP4R3A-203ENST00000554511 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
PPP4R3A-203ENST00000554511 P0C880 135 aa8.26□□□□□ -1.09
PPP4R3A-203ENST00000554511 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
PPP4R3A-203ENST00000554511 R4GN34 69 aa8.23□□□□□ -1.09
PPP4R3A-203ENST00000554511 SPRR2GQ9BYE4 73 aa8.21□□□□□ -1.1
PPP4R3A-203ENST00000554511 SYNE2Q8WXH0 6885 aaKnown RBP8.2□□□□□ -1.1
PPP4R3A-203ENST00000554511 A0A1B0GU69 56 aa8.19□□□□□ -1.1
PPP4R3A-203ENST00000554511 KRTAP19-6Q3LI70 58 aa8.18□□□□□ -1.1
PPP4R3A-203ENST00000554511 PRR15LQ9BU68 103 aa8.17□□□□□ -1.1
PPP4R3A-203ENST00000554511 M0QZ58 72 aa8.16□□□□□ -1.1
PPP4R3A-203ENST00000554511 RPS28P62857 69 aaKnown RBP8.14□□□□□ -1.11
PPP4R3A-203ENST00000554511 LINC01558Q9Y6Z2 57 aa8.14□□□□□ -1.11
PPP4R3A-203ENST00000554511 V9GYY9 64 aa8.11□□□□□ -1.11
PPP4R3A-203ENST00000554511 A0A1B0GU33 70 aa8.08□□□□□ -1.12
PPP4R3A-203ENST00000554511 SMIM26A0A096LP01 95 aa8.07□□□□□ -1.12
PPP4R3A-203ENST00000554511 Q5VV11 94 aa8.07□□□□□ -1.12
PPP4R3A-203ENST00000554511 KRTAP19-8Q3LI54 63 aa8.05□□□□□ -1.12
PPP4R3A-203ENST00000554511 Q1T7F1 81 aa8□□□□□ -1.13
PPP4R3A-203ENST00000554511 LINC01554Q52M75 96 aa8□□□□□ -1.13
PPP4R3A-203ENST00000554511 PLAC4Q8WY50 150 aa7.95□□□□□ -1.14
PPP4R3A-203ENST00000554511 MT1BP07438 61 aa7.93□□□□□ -1.14
PPP4R3A-203ENST00000554511 KRTAP6-3Q3LI67 103 aa7.93□□□□□ -1.14
PPP4R3A-203ENST00000554511 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
PPP4R3A-203ENST00000554511 SPATA8Q6RVD6 105 aa7.89□□□□□ -1.15
PPP4R3A-203ENST00000554511 A6NN06 94 aa7.88□□□□□ -1.15
PPP4R3A-203ENST00000554511 UQCR11O14957 56 aa7.88□□□□□ -1.15
PPP4R3A-203ENST00000554511 PSPHP1O15172 72 aa7.86□□□□□ -1.15
PPP4R3A-203ENST00000554511 A0A0D9SG42 100 aa7.81□□□□□ -1.16
PPP4R3A-203ENST00000554511 MIR22HGQ0VDD5 57 aa7.73□□□□□ -1.17
PPP4R3A-203ENST00000554511 PRO2289Q9P1D8 64 aa7.73□□□□□ -1.17
PPP4R3A-203ENST00000554511 SPINT4Q6UDR6 99 aa7.71□□□□□ -1.18
PPP4R3A-203ENST00000554511 NEBP20929 6669 aa7.71□□□□□ -1.18
PPP4R3A-203ENST00000554511 A8MU10 97 aa7.69□□□□□ -1.18
PPP4R3A-203ENST00000554511 A6NED7 52 aa7.68□□□□□ -1.18
PPP4R3A-203ENST00000554511 KRTAP10-5P60370 271 aa7.68□□□□□ -1.18
PPP4R3A-203ENST00000554511 CAMK2N1Q7Z7J9 78 aa7.67□□□□□ -1.18
PPP4R3A-203ENST00000554511 MUC12Q9UKN1 5478 aa7.65□□□□□ -1.19
PPP4R3A-203ENST00000554511 KRTAP12-1P59990 96 aa7.64□□□□□ -1.19
PPP4R3A-203ENST00000554511 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
PPP4R3A-203ENST00000554511 MT1XP80297 61 aa7.58□□□□□ -1.2
PPP4R3A-203ENST00000554511 K7ERS5 55 aa7.57□□□□□ -1.2
PPP4R3A-203ENST00000554511 KRTAP5-9P26371 169 aa7.47□□□□□ -1.21
PPP4R3A-203ENST00000554511 KRTAP20-1Q3LI63 56 aa7.46□□□□□ -1.22
PPP4R3A-203ENST00000554511 CDC42SE1Q9NRR8 79 aa7.45□□□□□ -1.22
PPP4R3A-203ENST00000554511 KMT2DO14686 5537 aa7.42□□□□□ -1.22
PPP4R3A-203ENST00000554511 MDN1Q9NU22 5596 aa7.39□□□□□ -1.23
PPP4R3A-203ENST00000554511 C10orf95Q9H7T3 257 aa7.25□□□□□ -1.25
PPP4R3A-203ENST00000554511 KRTAP10-7P60409 375 aaPredicted RBP7.24□□□□□ -1.25
PPP4R3A-203ENST00000554511 KRTAP10-12P60413 245 aa7.23□□□□□ -1.25
PPP4R3A-203ENST00000554511 BRK1Q8WUW1 75 aa7.23□□□□□ -1.25
PPP4R3A-203ENST00000554511 TNP1P09430 55 aa7.22□□□□□ -1.25
PPP4R3A-203ENST00000554511 SPRR2FQ96RM1 72 aa7.21□□□□□ -1.26
PPP4R3A-203ENST00000554511 KRTAP2-3P0C7H8 128 aa7.2□□□□□ -1.26
PPP4R3A-203ENST00000554511 KRTAP2-4Q9BYR9 128 aa7.2□□□□□ -1.26
PPP4R3A-203ENST00000554511 SPRR2EP22531 72 aa7.15□□□□□ -1.26
PPP4R3A-203ENST00000554511 SPRR2BP35325 72 aa7.15□□□□□ -1.26
PPP4R3A-203ENST00000554511 SPRR2AP35326 72 aa7.15□□□□□ -1.26
PPP4R3A-203ENST00000554511 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
PPP4R3A-203ENST00000554511 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
PPP4R3A-203ENST00000554511 ROMO1P60602 79 aa7.08□□□□□ -1.28
PPP4R3A-203ENST00000554511 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
PPP4R3A-203ENST00000554511 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
PPP4R3A-203ENST00000554511 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
PPP4R3A-203ENST00000554511 KRTAP2-2Q9BYT5 123 aa6.96□□□□□ -1.3
PPP4R3A-203ENST00000554511 KRTAP2-1Q9BYU5 128 aa6.96□□□□□ -1.3
PPP4R3A-203ENST00000554511 SPRR2DP22532 72 aa6.92□□□□□ -1.3
PPP4R3A-203ENST00000554511 LCE3AQ5TA76 89 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms