RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
TUBB3-202ENST00000553656 CCDC179H3BU77 68 aa6.58□□□□□ -1.36
TUBB3-202ENST00000553656 MT1FP04733 61 aa6.57□□□□□ -1.36
TUBB3-202ENST00000553656 NDUFC1O43677 76 aa6.54□□□□□ -1.36
TUBB3-202ENST00000553656 C20orf197Q8N268 126 aa6.54□□□□□ -1.36
TUBB3-202ENST00000553656 SNURFQ9Y675 71 aa6.54□□□□□ -1.36
TUBB3-202ENST00000553656 DMAC1Q96GE9 116 aa6.53□□□□□ -1.36
TUBB3-202ENST00000553656 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
TUBB3-202ENST00000553656 ACYP2P14621 99 aa6.45□□□□□ -1.38
TUBB3-202ENST00000553656 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
TUBB3-202ENST00000553656 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
TUBB3-202ENST00000553656 SPANXA2-OT1Q8N9U9 137 aa6.42□□□□□ -1.38
TUBB3-202ENST00000553656 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
TUBB3-202ENST00000553656 CHKB-CPT1BH3BT56 60 aa6.38□□□□□ -1.39
TUBB3-202ENST00000553656 H7BZZ5 65 aa6.37□□□□□ -1.39
TUBB3-202ENST00000553656 KRTAP9-6A0A140TA67 174 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 H0YAA0 97 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 TMEM258P61165 79 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 SPTSSBQ8NFR3 76 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 LCE2BO14633 110 aa6.34□□□□□ -1.39
TUBB3-202ENST00000553656 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
TUBB3-202ENST00000553656 CRIPTQ9P021 101 aa6.3□□□□□ -1.4
TUBB3-202ENST00000553656 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
TUBB3-202ENST00000553656 USH2AO75445 5202 aa6.26□□□□□ -1.41
TUBB3-202ENST00000553656 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
TUBB3-202ENST00000553656 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
TUBB3-202ENST00000553656 COA5Q86WW8 74 aa6.23□□□□□ -1.41
TUBB3-202ENST00000553656 Q5VV11 94 aa6.18□□□□□ -1.42
TUBB3-202ENST00000553656 P0C880 135 aa6.17□□□□□ -1.42
TUBB3-202ENST00000553656 SERP1Q9Y6X1 66 aa6.16□□□□□ -1.42
TUBB3-202ENST00000553656 R4GN34 69 aa6.16□□□□□ -1.42
TUBB3-202ENST00000553656 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
TUBB3-202ENST00000553656 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
TUBB3-202ENST00000553656 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
TUBB3-202ENST00000553656 M0QZ58 72 aa6.11□□□□□ -1.43
TUBB3-202ENST00000553656 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
TUBB3-202ENST00000553656 MT1BP07438 61 aa6.09□□□□□ -1.43
TUBB3-202ENST00000553656 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
TUBB3-202ENST00000553656 SEC61GP60059 68 aa6.08□□□□□ -1.44
TUBB3-202ENST00000553656 LINC01554Q52M75 96 aa6.02□□□□□ -1.45
TUBB3-202ENST00000553656 PLAC4Q8WY50 150 aa6□□□□□ -1.45
TUBB3-202ENST00000553656 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
TUBB3-202ENST00000553656 A6NN06 94 aa5.98□□□□□ -1.45
TUBB3-202ENST00000553656 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.45
TUBB3-202ENST00000553656 A0A1B0GU69 56 aa5.94□□□□□ -1.46
TUBB3-202ENST00000553656 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
TUBB3-202ENST00000553656 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
TUBB3-202ENST00000553656 A0A1B0GU33 70 aa5.89□□□□□ -1.47
TUBB3-202ENST00000553656 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
TUBB3-202ENST00000553656 Q1T7F1 81 aa5.87□□□□□ -1.47
TUBB3-202ENST00000553656 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
TUBB3-202ENST00000553656 V9GYY9 64 aa5.87□□□□□ -1.47
TUBB3-202ENST00000553656 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
TUBB3-202ENST00000553656 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
TUBB3-202ENST00000553656 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
TUBB3-202ENST00000553656 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
TUBB3-202ENST00000553656 A0A0D9SG42 100 aa5.79□□□□□ -1.48
TUBB3-202ENST00000553656 MT1XP80297 61 aa5.79□□□□□ -1.48
TUBB3-202ENST00000553656 PSPHP1O15172 72 aa5.76□□□□□ -1.49
TUBB3-202ENST00000553656 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
TUBB3-202ENST00000553656 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
TUBB3-202ENST00000553656 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
TUBB3-202ENST00000553656 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
TUBB3-202ENST00000553656 A8MU10 97 aa5.65□□□□□ -1.5
TUBB3-202ENST00000553656 UQCR11O14957 56 aa5.65□□□□□ -1.5
TUBB3-202ENST00000553656 KRTAP12-1P59990 96 aa5.64□□□□□ -1.51
TUBB3-202ENST00000553656 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
TUBB3-202ENST00000553656 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
TUBB3-202ENST00000553656 A6NED7 52 aa5.6□□□□□ -1.51
TUBB3-202ENST00000553656 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
TUBB3-202ENST00000553656 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
TUBB3-202ENST00000553656 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
TUBB3-202ENST00000553656 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
TUBB3-202ENST00000553656 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
TUBB3-202ENST00000553656 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
TUBB3-202ENST00000553656 K7ERS5 55 aa5.45□□□□□ -1.54
TUBB3-202ENST00000553656 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
TUBB3-202ENST00000553656 KMT2DO14686 5537 aa5.43□□□□□ -1.54
TUBB3-202ENST00000553656 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
TUBB3-202ENST00000553656 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
TUBB3-202ENST00000553656 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
TUBB3-202ENST00000553656 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
TUBB3-202ENST00000553656 NEBP20929 6669 aa5.37□□□□□ -1.55
TUBB3-202ENST00000553656 TNP1P09430 55 aa5.35□□□□□ -1.55
TUBB3-202ENST00000553656 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
TUBB3-202ENST00000553656 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
TUBB3-202ENST00000553656 SPRR2EP22531 72 aa5.27□□□□□ -1.57
TUBB3-202ENST00000553656 SPRR2BP35325 72 aa5.27□□□□□ -1.57
TUBB3-202ENST00000553656 SPRR2AP35326 72 aa5.27□□□□□ -1.57
TUBB3-202ENST00000553656 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
TUBB3-202ENST00000553656 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
TUBB3-202ENST00000553656 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
TUBB3-202ENST00000553656 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
TUBB3-202ENST00000553656 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
TUBB3-202ENST00000553656 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
TUBB3-202ENST00000553656 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
TUBB3-202ENST00000553656 MT1EP04732 61 aa5.12□□□□□ -1.59
TUBB3-202ENST00000553656 SPRR2DP22532 72 aa5.09□□□□□ -1.59
TUBB3-202ENST00000553656 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms