RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ATOX1O00244 68 aa5.84□□□□□ -1.47
ACTN1-207ENST00000553290 KLKP1Q107X0 134 aa5.83□□□□□ -1.48
ACTN1-207ENST00000553290 Q5VV11 94 aa5.83□□□□□ -1.48
ACTN1-207ENST00000553290 H0Y9P7 68 aa5.82□□□□□ -1.48
ACTN1-207ENST00000553290 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
ACTN1-207ENST00000553290 MT1BP07438 61 aa5.81□□□□□ -1.48
ACTN1-207ENST00000553290 KRTAP19-8Q3LI54 63 aa5.81□□□□□ -1.48
ACTN1-207ENST00000553290 LINC00643Q86TS7 51 aa5.81□□□□□ -1.48
ACTN1-207ENST00000553290 A0A087WVE0 104 aa5.8□□□□□ -1.48
ACTN1-207ENST00000553290 A6NN06 94 aa5.77□□□□□ -1.49
ACTN1-207ENST00000553290 IMUPQ9GZP8 106 aa5.77□□□□□ -1.49
ACTN1-207ENST00000553290 CRIPTQ9P021 101 aa5.77□□□□□ -1.49
ACTN1-207ENST00000553290 NDUFC1O43677 76 aa5.76□□□□□ -1.49
ACTN1-207ENST00000553290 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
ACTN1-207ENST00000553290 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
ACTN1-207ENST00000553290 A8MUN3 132 aa5.74□□□□□ -1.49
ACTN1-207ENST00000553290 LINC00208Q96KT6 92 aa5.73□□□□□ -1.49
ACTN1-207ENST00000553290 H0YAA0 97 aa5.72□□□□□ -1.49
ACTN1-207ENST00000553290 MP68P56378 58 aa5.71□□□□□ -1.5
ACTN1-207ENST00000553290 OCR1Q9BZK8 76 aa5.7□□□□□ -1.5
ACTN1-207ENST00000553290 KRTAP10-5P60370 271 aa5.69□□□□□ -1.5
ACTN1-207ENST00000553290 H3BPC8 53 aa5.64□□□□□ -1.51
ACTN1-207ENST00000553290 ADM2Q7Z4H4 148 aa5.63□□□□□ -1.51
ACTN1-207ENST00000553290 ANAPC13Q9BS18 74 aa5.61□□□□□ -1.51
ACTN1-207ENST00000553290 MT-ATP8P03928 68 aa5.57□□□□□ -1.52
ACTN1-207ENST00000553290 DMAC1Q96GE9 116 aa5.55□□□□□ -1.52
ACTN1-207ENST00000553290 C20orf197Q8N268 126 aa5.53□□□□□ -1.52
ACTN1-207ENST00000553290 SMIM20Q8N5G0 67 aa5.51□□□□□ -1.53
ACTN1-207ENST00000553290 R4GN34 69 aa5.51□□□□□ -1.53
ACTN1-207ENST00000553290 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
ACTN1-207ENST00000553290 P0C880 135 aa5.49□□□□□ -1.53
ACTN1-207ENST00000553290 KRTAP5-9P26371 169 aa5.49□□□□□ -1.53
ACTN1-207ENST00000553290 RPS28P62857 69 aaKnown RBP5.49□□□□□ -1.53
ACTN1-207ENST00000553290 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
ACTN1-207ENST00000553290 CCDC179H3BU77 68 aa5.46□□□□□ -1.54
ACTN1-207ENST00000553290 TRAV7A0A075B6U4 112 aa5.45□□□□□ -1.54
ACTN1-207ENST00000553290 M0QZ58 72 aa5.45□□□□□ -1.54
ACTN1-207ENST00000553290 MUC12Q9UKN1 5478 aa5.44□□□□□ -1.54
ACTN1-207ENST00000553290 MT1XP80297 61 aa5.44□□□□□ -1.54
ACTN1-207ENST00000553290 KRTAP3-2Q9BYR7 98 aa5.44□□□□□ -1.54
ACTN1-207ENST00000553290 ACYP2P14621 99 aa5.43□□□□□ -1.54
ACTN1-207ENST00000553290 NEBP20929 6669 aa5.4□□□□□ -1.54
ACTN1-207ENST00000553290 SPTSSBQ8NFR3 76 aa5.39□□□□□ -1.55
ACTN1-207ENST00000553290 KMT2DO14686 5537 aa5.37□□□□□ -1.55
ACTN1-207ENST00000553290 LINC01554Q52M75 96 aa5.36□□□□□ -1.55
ACTN1-207ENST00000553290 COX7CP15954 63 aa5.35□□□□□ -1.55
ACTN1-207ENST00000553290 KRTAP12-2P59991 146 aa5.34□□□□□ -1.55
ACTN1-207ENST00000553290 TMEM258P61165 79 aa5.34□□□□□ -1.55
ACTN1-207ENST00000553290 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
ACTN1-207ENST00000553290 CHKB-CPT1BH3BT56 60 aa5.32□□□□□ -1.56
ACTN1-207ENST00000553290 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
ACTN1-207ENST00000553290 MDN1Q9NU22 5596 aa5.3□□□□□ -1.56
ACTN1-207ENST00000553290 KRTAP8-1Q8IUC2 63 aa5.3□□□□□ -1.56
ACTN1-207ENST00000553290 SNURFQ9Y675 71 aa5.3□□□□□ -1.56
ACTN1-207ENST00000553290 SPANXA2-OT1Q8N9U9 137 aa5.26□□□□□ -1.57
ACTN1-207ENST00000553290 SERP2Q8N6R1 65 aa5.25□□□□□ -1.57
ACTN1-207ENST00000553290 SPRR2EP22531 72 aa5.24□□□□□ -1.57
ACTN1-207ENST00000553290 SPRR2BP35325 72 aa5.24□□□□□ -1.57
ACTN1-207ENST00000553290 SPRR2AP35326 72 aa5.24□□□□□ -1.57
ACTN1-207ENST00000553290 PRO0628Q9UI54 55 aa5.22□□□□□ -1.57
ACTN1-207ENST00000553290 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.58
ACTN1-207ENST00000553290 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.58
ACTN1-207ENST00000553290 KRTAP4-8A0A0G2JLE6 195 aa5.2□□□□□ -1.58
ACTN1-207ENST00000553290 KRTAP4-8Q9BYQ9 185 aa5.2□□□□□ -1.58
ACTN1-207ENST00000553290 KRTAP10-7P60409 375 aaPredicted RBP5.18□□□□□ -1.58
ACTN1-207ENST00000553290 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
ACTN1-207ENST00000553290 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
ACTN1-207ENST00000553290 SERP1Q9Y6X1 66 aa5.17□□□□□ -1.58
ACTN1-207ENST00000553290 ATP5EP56381 51 aaPredicted RBP5.15□□□□□ -1.59
ACTN1-207ENST00000553290 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
ACTN1-207ENST00000553290 CYSTM1Q9H1C7 97 aa5.11□□□□□ -1.59
ACTN1-207ENST00000553290 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
ACTN1-207ENST00000553290 COA5Q86WW8 74 aa5.1□□□□□ -1.59
ACTN1-207ENST00000553290 SPRR2DP22532 72 aa5.08□□□□□ -1.6
ACTN1-207ENST00000553290 H7BZZ5 65 aa5.06□□□□□ -1.6
ACTN1-207ENST00000553290 SEC61GP60059 68 aa5.06□□□□□ -1.6
ACTN1-207ENST00000553290 CAMK2N1Q7Z7J9 78 aa5.06□□□□□ -1.6
ACTN1-207ENST00000553290 V9GYY9 64 aa5.06□□□□□ -1.6
ACTN1-207ENST00000553290 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
ACTN1-207ENST00000553290 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
ACTN1-207ENST00000553290 A0A0D9SG42 100 aa4.96□□□□□ -1.62
ACTN1-207ENST00000553290 A0A1B0GU33 70 aa4.95□□□□□ -1.62
ACTN1-207ENST00000553290 LCE3BQ5TA77 95 aa4.94□□□□□ -1.62
ACTN1-207ENST00000553290 SPATA8Q6RVD6 105 aa4.94□□□□□ -1.62
ACTN1-207ENST00000553290 BRK1Q8WUW1 75 aa4.91□□□□□ -1.62
ACTN1-207ENST00000553290 PMAIP1Q13794 54 aa4.9□□□□□ -1.63
ACTN1-207ENST00000553290 Q1T7F1 81 aa4.9□□□□□ -1.63
ACTN1-207ENST00000553290 SPINT4Q6UDR6 99 aa4.9□□□□□ -1.63
ACTN1-207ENST00000553290 KRTAP12-1P59990 96 aa4.87□□□□□ -1.63
ACTN1-207ENST00000553290 A0A1B0GU69 56 aa4.85□□□□□ -1.63
ACTN1-207ENST00000553290 KRTAP19-7Q3SYF9 63 aa4.85□□□□□ -1.63
ACTN1-207ENST00000553290 MT1EP04732 61 aa4.82□□□□□ -1.64
ACTN1-207ENST00000553290 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
ACTN1-207ENST00000553290 KRTAP19-3Q7Z4W3 81 aa4.8□□□□□ -1.64
ACTN1-207ENST00000553290 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
ACTN1-207ENST00000553290 A8MU10 97 aa4.74□□□□□ -1.65
ACTN1-207ENST00000553290 KRTAP19-5Q3LI72 72 aa4.73□□□□□ -1.65
ACTN1-207ENST00000553290 PRR15LQ9BU68 103 aa4.72□□□□□ -1.65
ACTN1-207ENST00000553290 MT1GP13640 62 aa4.7□□□□□ -1.66
ACTN1-207ENST00000553290 TNP1P09430 55 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms