RNA–Protein interactions for RNA: ENST00000552739.5

LETMD1-235, Transcript of LETM1 domain containing 1, humanhuman

TSL 2 BASIC

Gene LETMD1, Length 1,713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-235ENST00000552739 RNF213Q63HN8 5207 aa7.99□□□□□ -1.13
LETMD1-235ENST00000552739 IGKV2D-30A0A075B6S6 120 aa7.98□□□□□ -1.13
LETMD1-235ENST00000552739 A0A1B0GU69 56 aa7.98□□□□□ -1.13
LETMD1-235ENST00000552739 C7orf65Q6ZTY9 151 aa7.98□□□□□ -1.13
LETMD1-235ENST00000552739 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
LETMD1-235ENST00000552739 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
LETMD1-235ENST00000552739 UQCR11O14957 56 aa7.89□□□□□ -1.15
LETMD1-235ENST00000552739 RBM12B-AS1Q9P1G2 102 aa7.84□□□□□ -1.15
LETMD1-235ENST00000552739 MIR22HGQ0VDD5 57 aa7.83□□□□□ -1.16
LETMD1-235ENST00000552739 MUC17Q685J3 4493 aa7.82□□□□□ -1.16
LETMD1-235ENST00000552739 A8MUU9 505 aa7.81□□□□□ -1.16
LETMD1-235ENST00000552739 C20orf166-AS1Q96NR2 134 aa7.81□□□□□ -1.16
LETMD1-235ENST00000552739 MUC2Q02817 5179 aa7.78□□□□□ -1.16
LETMD1-235ENST00000552739 XP32Q5T750 250 aa7.68□□□□□ -1.18
LETMD1-235ENST00000552739 SEC61BP60468 96 aaKnown RBP7.64□□□□□ -1.19
LETMD1-235ENST00000552739 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
LETMD1-235ENST00000552739 KRTAP3-1Q9BYR8 98 aa7.61□□□□□ -1.19
LETMD1-235ENST00000552739 FAT4Q6V0I7 4981 aa7.57□□□□□ -1.2
LETMD1-235ENST00000552739 COX6B2Q6YFQ2 88 aa7.56□□□□□ -1.2
LETMD1-235ENST00000552739 PRAC1Q96KF2 57 aa7.56□□□□□ -1.2
LETMD1-235ENST00000552739 KRTAP4-1Q9BYQ7 146 aa7.56□□□□□ -1.2
LETMD1-235ENST00000552739 H0YAA0 97 aa7.54□□□□□ -1.2
LETMD1-235ENST00000552739 A0A1B0GU33 70 aa7.53□□□□□ -1.2
LETMD1-235ENST00000552739 H1FX-AS1Q4G0G2 97 aa7.53□□□□□ -1.2
LETMD1-235ENST00000552739 ADM2Q7Z4H4 148 aa7.52□□□□□ -1.2
LETMD1-235ENST00000552739 RPL37P61927 97 aaKnown RBP7.5□□□□□ -1.21
LETMD1-235ENST00000552739 LINC01554Q52M75 96 aa7.49□□□□□ -1.21
LETMD1-235ENST00000552739 LCE2AQ5TA79 106 aaPredicted RBP7.49□□□□□ -1.21
LETMD1-235ENST00000552739 CSAG1Q6PB30 78 aa7.4□□□□□ -1.23
LETMD1-235ENST00000552739 K7ERS5 55 aa7.38□□□□□ -1.23
LETMD1-235ENST00000552739 KRTAP19-2Q3LHN2 52 aa7.38□□□□□ -1.23
LETMD1-235ENST00000552739 LCE2CQ5TA81 110 aa7.35□□□□□ -1.23
LETMD1-235ENST00000552739 KRTAP3-3Q9BYR6 98 aa7.31□□□□□ -1.24
LETMD1-235ENST00000552739 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
LETMD1-235ENST00000552739 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
LETMD1-235ENST00000552739 MT1HP80294 61 aa7.25□□□□□ -1.25
LETMD1-235ENST00000552739 S4R3F8 94 aa7.25□□□□□ -1.25
LETMD1-235ENST00000552739 KRTAP3-2Q9BYR7 98 aa7.23□□□□□ -1.25
LETMD1-235ENST00000552739 ROMO1P60602 79 aa7.18□□□□□ -1.26
LETMD1-235ENST00000552739 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
LETMD1-235ENST00000552739 KRTAP9-2Q9BYQ4 174 aa7.16□□□□□ -1.26
LETMD1-235ENST00000552739 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
LETMD1-235ENST00000552739 M0R2T5 61 aa7.1□□□□□ -1.27
LETMD1-235ENST00000552739 LORP23490 312 aaPredicted RBP7.08□□□□□ -1.28
LETMD1-235ENST00000552739 P0C880 135 aa7.04□□□□□ -1.28
LETMD1-235ENST00000552739 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
LETMD1-235ENST00000552739 M0QZ58 72 aa7.01□□□□□ -1.29
LETMD1-235ENST00000552739 A0A0D9SG42 100 aa7□□□□□ -1.29
LETMD1-235ENST00000552739 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
LETMD1-235ENST00000552739 KRTAP12-2P59991 146 aa6.92□□□□□ -1.3
LETMD1-235ENST00000552739 CRIPTQ9P021 101 aa6.9□□□□□ -1.3
LETMD1-235ENST00000552739 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
LETMD1-235ENST00000552739 KRTAP9-8Q9BYQ0 159 aa6.87□□□□□ -1.31
LETMD1-235ENST00000552739 FSIP2Q5CZC0 6907 aa6.83□□□□□ -1.32
LETMD1-235ENST00000552739 SPINT4Q6UDR6 99 aa6.81□□□□□ -1.32
LETMD1-235ENST00000552739 MT2AP02795 61 aa6.8□□□□□ -1.32
LETMD1-235ENST00000552739 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
LETMD1-235ENST00000552739 H3BS24 57 aa6.76□□□□□ -1.33
LETMD1-235ENST00000552739 MT1FP04733 61 aa6.75□□□□□ -1.33
LETMD1-235ENST00000552739 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
LETMD1-235ENST00000552739 R4GN34 69 aa6.7□□□□□ -1.34
LETMD1-235ENST00000552739 KRTAP10-10P60014 251 aa6.69□□□□□ -1.34
LETMD1-235ENST00000552739 USH2AO75445 5202 aa6.68□□□□□ -1.34
LETMD1-235ENST00000552739 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
LETMD1-235ENST00000552739 KRTAP9-3Q9BYQ3 159 aa6.65□□□□□ -1.34
LETMD1-235ENST00000552739 LCE2BO14633 110 aa6.6□□□□□ -1.35
LETMD1-235ENST00000552739 SSPOA2VEC9 5147 aa6.59□□□□□ -1.36
LETMD1-235ENST00000552739 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
LETMD1-235ENST00000552739 KRTAP19-1Q8IUB9 90 aa6.43□□□□□ -1.38
LETMD1-235ENST00000552739 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
LETMD1-235ENST00000552739 NDUFAF8A1L188 74 aa6.39□□□□□ -1.39
LETMD1-235ENST00000552739 KRTAP19-6Q3LI70 58 aa6.35□□□□□ -1.39
LETMD1-235ENST00000552739 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
LETMD1-235ENST00000552739 KRTAP23-1A1A580 65 aa6.33□□□□□ -1.4
LETMD1-235ENST00000552739 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
LETMD1-235ENST00000552739 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.33□□□□□ -1.4
LETMD1-235ENST00000552739 SPRR2GQ9BYE4 73 aa6.3□□□□□ -1.4
LETMD1-235ENST00000552739 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
LETMD1-235ENST00000552739 MACF1Q9UPN3 7388 aaKnown RBP6.23□□□□□ -1.41
LETMD1-235ENST00000552739 MT1BP07438 61 aa6.22□□□□□ -1.41
LETMD1-235ENST00000552739 KRTAP9-7A8MTY7 169 aa6.2□□□□□ -1.42
LETMD1-235ENST00000552739 TNP1P09430 55 aa6.19□□□□□ -1.42
LETMD1-235ENST00000552739 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
LETMD1-235ENST00000552739 LUZP6Q538Z0 58 aa6.08□□□□□ -1.44
LETMD1-235ENST00000552739 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
LETMD1-235ENST00000552739 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
LETMD1-235ENST00000552739 KRTAP6-3Q3LI67 103 aa5.95□□□□□ -1.46
LETMD1-235ENST00000552739 MT1XP80297 61 aa5.87□□□□□ -1.47
LETMD1-235ENST00000552739 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
LETMD1-235ENST00000552739 A0A0A0MQY5 61 aa5.83□□□□□ -1.48
LETMD1-235ENST00000552739 KRTAP8-1Q8IUC2 63 aa5.78□□□□□ -1.48
LETMD1-235ENST00000552739 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
LETMD1-235ENST00000552739 NEBP20929 6669 aa5.75□□□□□ -1.49
LETMD1-235ENST00000552739 KRTAP5-9P26371 169 aa5.74□□□□□ -1.49
LETMD1-235ENST00000552739 MUC12Q9UKN1 5478 aa5.74□□□□□ -1.49
LETMD1-235ENST00000552739 KMT2DO14686 5537 aa5.71□□□□□ -1.5
LETMD1-235ENST00000552739 MDN1Q9NU22 5596 aa5.61□□□□□ -1.51
LETMD1-235ENST00000552739 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
LETMD1-235ENST00000552739 KRTAP10-7P60409 375 aaPredicted RBP5.59□□□□□ -1.51
LETMD1-235ENST00000552739 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms