RNA–Protein interactions for RNA: ENST00000552448.1

TUBA1C-209, Transcript of tubulin alpha 1c, humanhuman

TSL 3

Gene TUBA1C, Length 1,800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-209ENST00000552448 KIAA1109Q2LD37 5005 aa5.93□□□□□ -1.46
TUBA1C-209ENST00000552448 LRP1Q07954 4544 aaKnown RBP5.93□□□□□ -1.46
TUBA1C-209ENST00000552448 KRTAP10-8P60410 259 aa5.92□□□□□ -1.46
TUBA1C-209ENST00000552448 P0C880 135 aa5.92□□□□□ -1.46
TUBA1C-209ENST00000552448 FAT3Q8TDW7 4589 aa5.91□□□□□ -1.46
TUBA1C-209ENST00000552448 FLG2Q5D862 2391 aaPredicted RBP5.88□□□□□ -1.47
TUBA1C-209ENST00000552448 COX6B2Q6YFQ2 88 aa5.88□□□□□ -1.47
TUBA1C-209ENST00000552448 C9orf92A6NGG3 77 aa5.87□□□□□ -1.47
TUBA1C-209ENST00000552448 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
TUBA1C-209ENST00000552448 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
TUBA1C-209ENST00000552448 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
TUBA1C-209ENST00000552448 SPINT4Q6UDR6 99 aa5.84□□□□□ -1.47
TUBA1C-209ENST00000552448 KRTAP3-1Q9BYR8 98 aa5.83□□□□□ -1.48
TUBA1C-209ENST00000552448 MYCBP2O75592 4640 aa5.81□□□□□ -1.48
TUBA1C-209ENST00000552448 MT1HL1P0DM35 61 aa5.81□□□□□ -1.48
TUBA1C-209ENST00000552448 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
TUBA1C-209ENST00000552448 BIRC6Q9NR09 4857 aa5.77□□□□□ -1.49
TUBA1C-209ENST00000552448 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
TUBA1C-209ENST00000552448 DMBT1Q9UGM3 2413 aaPredicted RBP5.74□□□□□ -1.49
TUBA1C-209ENST00000552448 TPRXLQ17RH7 258 aa5.74□□□□□ -1.49
TUBA1C-209ENST00000552448 KRTAP4-5Q9BYR2 181 aa5.72□□□□□ -1.49
TUBA1C-209ENST00000552448 HERC2O95714 4834 aa5.71□□□□□ -1.5
TUBA1C-209ENST00000552448 NDUFAF8A1L188 74 aa5.69□□□□□ -1.5
TUBA1C-209ENST00000552448 KRTAP10-6P60371 365 aaPredicted RBP5.68□□□□□ -1.5
TUBA1C-209ENST00000552448 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
TUBA1C-209ENST00000552448 ABCA13Q86UQ4 5058 aa5.67□□□□□ -1.5
TUBA1C-209ENST00000552448 XP32Q5T750 250 aa5.64□□□□□ -1.51
TUBA1C-209ENST00000552448 J3QL48 77 aa5.64□□□□□ -1.51
TUBA1C-209ENST00000552448 A0A0D9SG42 100 aa5.61□□□□□ -1.51
TUBA1C-209ENST00000552448 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
TUBA1C-209ENST00000552448 KRTAP3-2Q9BYR7 98 aa5.6□□□□□ -1.51
TUBA1C-209ENST00000552448 S4R3F8 94 aa5.6□□□□□ -1.51
TUBA1C-209ENST00000552448 KRTAP3-3Q9BYR6 98 aa5.58□□□□□ -1.52
TUBA1C-209ENST00000552448 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
TUBA1C-209ENST00000552448 LRP2P98164 4655 aa5.54□□□□□ -1.52
TUBA1C-209ENST00000552448 LPAP08519 4548 aa5.51□□□□□ -1.53
TUBA1C-209ENST00000552448 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
TUBA1C-209ENST00000552448 PCLOQ9Y6V0 5065 aa5.49□□□□□ -1.53
TUBA1C-209ENST00000552448 M0QZ58 72 aa5.48□□□□□ -1.53
TUBA1C-209ENST00000552448 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
TUBA1C-209ENST00000552448 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
TUBA1C-209ENST00000552448 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
TUBA1C-209ENST00000552448 LUZP6Q538Z0 58 aa5.38□□□□□ -1.55
TUBA1C-209ENST00000552448 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
TUBA1C-209ENST00000552448 HERC1Q15751 4861 aa5.35□□□□□ -1.55
TUBA1C-209ENST00000552448 PLAC4Q8WY50 150 aa5.34□□□□□ -1.55
TUBA1C-209ENST00000552448 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
TUBA1C-209ENST00000552448 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
TUBA1C-209ENST00000552448 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
TUBA1C-209ENST00000552448 R4GN34 69 aa5.17□□□□□ -1.58
TUBA1C-209ENST00000552448 KRTAP19-2Q3LHN2 52 aa5.16□□□□□ -1.58
TUBA1C-209ENST00000552448 MUC2Q02817 5179 aa5.13□□□□□ -1.59
TUBA1C-209ENST00000552448 FLGP20930 4061 aaPredicted RBP5.12□□□□□ -1.59
TUBA1C-209ENST00000552448 RNF213Q63HN8 5207 aa5.05□□□□□ -1.6
TUBA1C-209ENST00000552448 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
TUBA1C-209ENST00000552448 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
TUBA1C-209ENST00000552448 LORP23490 312 aaPredicted RBP5□□□□□ -1.61
TUBA1C-209ENST00000552448 LCE2CQ5TA81 110 aa4.97□□□□□ -1.61
TUBA1C-209ENST00000552448 CAMK2N1Q7Z7J9 78 aa4.95□□□□□ -1.62
TUBA1C-209ENST00000552448 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
TUBA1C-209ENST00000552448 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
TUBA1C-209ENST00000552448 MT1HP80294 61 aa4.88□□□□□ -1.63
TUBA1C-209ENST00000552448 M0R2T5 61 aa4.87□□□□□ -1.63
TUBA1C-209ENST00000552448 TNP1P09430 55 aa4.87□□□□□ -1.63
TUBA1C-209ENST00000552448 PRO2289Q9P1D8 64 aa4.83□□□□□ -1.64
TUBA1C-209ENST00000552448 INE1O15225 51 aa4.77□□□□□ -1.65
TUBA1C-209ENST00000552448 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
TUBA1C-209ENST00000552448 MT2AP02795 61 aa4.69□□□□□ -1.66
TUBA1C-209ENST00000552448 SPRR2GQ9BYE4 73 aa4.69□□□□□ -1.66
TUBA1C-209ENST00000552448 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
TUBA1C-209ENST00000552448 KRTAP19-1Q8IUB9 90 aa4.68□□□□□ -1.66
TUBA1C-209ENST00000552448 MT1FP04733 61 aa4.66□□□□□ -1.66
TUBA1C-209ENST00000552448 LCE2AQ5TA79 106 aaPredicted RBP4.65□□□□□ -1.66
TUBA1C-209ENST00000552448 LCE2BO14633 110 aa4.64□□□□□ -1.67
TUBA1C-209ENST00000552448 KRTAP19-8Q3LI54 63 aa4.54□□□□□ -1.68
TUBA1C-209ENST00000552448 KRTAP9-3Q9BYQ3 159 aa4.54□□□□□ -1.68
TUBA1C-209ENST00000552448 MT1BP07438 61 aa4.46□□□□□ -1.69
TUBA1C-209ENST00000552448 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
TUBA1C-209ENST00000552448 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
TUBA1C-209ENST00000552448 KRTAP10-5P60370 271 aa4.39□□□□□ -1.71
TUBA1C-209ENST00000552448 MT1XP80297 61 aa4.38□□□□□ -1.71
TUBA1C-209ENST00000552448 KRTAP12-3P60328 96 aa4.28□□□□□ -1.72
TUBA1C-209ENST00000552448 USH2AO75445 5202 aa4.27□□□□□ -1.73
TUBA1C-209ENST00000552448 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
TUBA1C-209ENST00000552448 KRTAP10-12P60413 245 aa4.23□□□□□ -1.73
TUBA1C-209ENST00000552448 SSPOA2VEC9 5147 aa4.18□□□□□ -1.74
TUBA1C-209ENST00000552448 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
TUBA1C-209ENST00000552448 FSIP2Q5CZC0 6907 aa4.06□□□□□ -1.76
TUBA1C-209ENST00000552448 LCE3CQ5T5A8 94 aa4.06□□□□□ -1.76
TUBA1C-209ENST00000552448 KMT2DO14686 5537 aa4.05□□□□□ -1.76
TUBA1C-209ENST00000552448 KRTAP19-5Q3LI72 72 aa4.02□□□□□ -1.77
TUBA1C-209ENST00000552448 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
TUBA1C-209ENST00000552448 KRTAP4-8Q9BYQ9 185 aa4□□□□□ -1.77
TUBA1C-209ENST00000552448 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
TUBA1C-209ENST00000552448 KRTAP9-2Q9BYQ4 174 aa3.99□□□□□ -1.77
TUBA1C-209ENST00000552448 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
TUBA1C-209ENST00000552448 KRTAP4-6Q9BYQ5 205 aa3.98□□□□□ -1.77
TUBA1C-209ENST00000552448 KRTAP2-3P0C7H8 128 aa3.96□□□□□ -1.78
TUBA1C-209ENST00000552448 KRTAP2-4Q9BYR9 128 aa3.96□□□□□ -1.78
TUBA1C-209ENST00000552448 KRTAP2-1Q9BYU5 128 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms