RNA–Protein interactions for RNA: ENST00000552422.5

CNOT2-238, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 3

Gene CNOT2, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-238	ENST00000552422	CXCL6	P80162	114 aa		3.36	□□□□□ -1.87
CNOT2-238	ENST00000552422	CASC2	Q6XLA1	102 aa		3.36	□□□□□ -1.87
CNOT2-238	ENST00000552422	WFDC13	Q8IUB5	93 aa		3.36	□□□□□ -1.87
CNOT2-238	ENST00000552422	HCG22	E2RYF7	251 aa		3.35	□□□□□ -1.87
CNOT2-238	ENST00000552422	NDUFS5	O43920	106 aa		3.35	□□□□□ -1.87
CNOT2-238	ENST00000552422	ACYP1	P07311	99 aa		3.35	□□□□□ -1.87
CNOT2-238	ENST00000552422	SPINK7	P58062	85 aa		3.34	□□□□□ -1.87
CNOT2-238	ENST00000552422	RBM12B-AS1	Q9P1G2	102 aa		3.33	□□□□□ -1.88
CNOT2-238	ENST00000552422		M0R2T5	61 aa		3.32	□□□□□ -1.88
CNOT2-238	ENST00000552422	ATP5EP2	Q5VTU8	51 aa		3.32	□□□□□ -1.88
CNOT2-238	ENST00000552422		Q5W150	140 aa		3.32	□□□□□ -1.88
CNOT2-238	ENST00000552422	FAM236D	A0A1B0GTK5	79 aa		3.31	□□□□□ -1.88
CNOT2-238	ENST00000552422	FAM236C	P0DP71	79 aa		3.31	□□□□□ -1.88
CNOT2-238	ENST00000552422	LCE3E	Q5T5B0	92 aa		3.31	□□□□□ -1.88
CNOT2-238	ENST00000552422	C7orf65	Q6ZTY9	151 aa		3.29	□□□□□ -1.88
CNOT2-238	ENST00000552422	LINC00643	Q86TS7	51 aa		3.29	□□□□□ -1.88
CNOT2-238	ENST00000552422	TP53AIP1	Q9HCN2	124 aa		3.28	□□□□□ -1.88
CNOT2-238	ENST00000552422	MT-ATP8	P03928	68 aa		3.27	□□□□□ -1.89
CNOT2-238	ENST00000552422	HIST1H4A	P62805	103 aa	Known RBP	3.26	□□□□□ -1.89
CNOT2-238	ENST00000552422	IMUP	Q9GZP8	106 aa		3.26	□□□□□ -1.89
CNOT2-238	ENST00000552422	KRTAP12-2	P59991	146 aa		3.25	□□□□□ -1.89
CNOT2-238	ENST00000552422	SCGB1A1	P11684	91 aa		3.24	□□□□□ -1.89
CNOT2-238	ENST00000552422		A0A087WVE0	104 aa		3.23	□□□□□ -1.89
CNOT2-238	ENST00000552422	TRAV22	A0A0B4J277	110 aa		3.23	□□□□□ -1.89
CNOT2-238	ENST00000552422		A8MU10	97 aa		3.22	□□□□□ -1.89
CNOT2-238	ENST00000552422	C4orf26	Q17RF5	130 aa		3.22	□□□□□ -1.89
CNOT2-238	ENST00000552422	H1FX-AS1	Q4G0G2	97 aa		3.22	□□□□□ -1.89
CNOT2-238	ENST00000552422	UQCRQ	O14949	82 aa		3.2	□□□□□ -1.9
CNOT2-238	ENST00000552422	CYP4F30P	Q9H0H9	118 aa		3.2	□□□□□ -1.9
CNOT2-238	ENST00000552422	LOC101927531	A0A1B0GV80	90 aa		3.19	□□□□□ -1.9
CNOT2-238	ENST00000552422	MT2A	P02795	61 aa		3.19	□□□□□ -1.9
CNOT2-238	ENST00000552422	OCR1	Q9BZK8	76 aa		3.19	□□□□□ -1.9
CNOT2-238	ENST00000552422		H0Y9P7	68 aa		3.18	□□□□□ -1.9
CNOT2-238	ENST00000552422	ATOX1	O00244	68 aa		3.18	□□□□□ -1.9
CNOT2-238	ENST00000552422	MT1F	P04733	61 aa		3.17	□□□□□ -1.9
CNOT2-238	ENST00000552422	LCE3A	Q5TA76	89 aa		3.17	□□□□□ -1.9
CNOT2-238	ENST00000552422	C1orf64	Q8NEQ6	169 aa		3.17	□□□□□ -1.9
CNOT2-238	ENST00000552422	FSIP2	Q5CZC0	6907 aa		3.16	□□□□□ -1.9
CNOT2-238	ENST00000552422	FAM236A	A0A1B0GUQ0	79 aa		3.14	□□□□□ -1.91
CNOT2-238	ENST00000552422	FAM236B	A0A1B0GV22	79 aa		3.14	□□□□□ -1.91
CNOT2-238	ENST00000552422	KRTAP10-10	P60014	251 aa		3.14	□□□□□ -1.91
CNOT2-238	ENST00000552422		S4R3F8	94 aa		3.14	□□□□□ -1.91
CNOT2-238	ENST00000552422	MP68	P56378	58 aa		3.13	□□□□□ -1.91
CNOT2-238	ENST00000552422	C5orf47	Q569G3	176 aa		3.13	□□□□□ -1.91
CNOT2-238	ENST00000552422	LINC00208	Q96KT6	92 aa		3.13	□□□□□ -1.91
CNOT2-238	ENST00000552422	LCA10	Q71F78	164 aa		3.12	□□□□□ -1.91
CNOT2-238	ENST00000552422	KRTAP4-3	Q9BYR4	195 aa		3.12	□□□□□ -1.91
CNOT2-238	ENST00000552422	CRCT1	Q9UGL9	99 aa		3.12	□□□□□ -1.91
CNOT2-238	ENST00000552422		H3BPC8	53 aa		3.11	□□□□□ -1.91
CNOT2-238	ENST00000552422	KLKP1	Q107X0	134 aa		3.11	□□□□□ -1.91
CNOT2-238	ENST00000552422	SMIM20	Q8N5G0	67 aa		3.11	□□□□□ -1.91
CNOT2-238	ENST00000552422	ANAPC13	Q9BS18	74 aa		3.11	□□□□□ -1.91
CNOT2-238	ENST00000552422	USH2A	O75445	5202 aa		3.1	□□□□□ -1.91
CNOT2-238	ENST00000552422	SERP2	Q8N6R1	65 aa		3.1	□□□□□ -1.91
CNOT2-238	ENST00000552422	OBSCN	Q5VST9	7968 aa		3.1	□□□□□ -1.91
CNOT2-238	ENST00000552422	TRAV7	A0A075B6U4	112 aa		3.09	□□□□□ -1.91
CNOT2-238	ENST00000552422		A8MUN3	132 aa		3.09	□□□□□ -1.91
CNOT2-238	ENST00000552422	COX7C	P15954	63 aa		3.09	□□□□□ -1.91
CNOT2-238	ENST00000552422	CSAG1	Q6PB30	78 aa		3.09	□□□□□ -1.91
CNOT2-238	ENST00000552422	SSPO	A2VEC9	5147 aa		3.08	□□□□□ -1.92
CNOT2-238	ENST00000552422	CCDC179	H3BU77	68 aa		3.06	□□□□□ -1.92
CNOT2-238	ENST00000552422	NDUFC1	O43677	76 aa		3.04	□□□□□ -1.92
CNOT2-238	ENST00000552422	DMAC1	Q96GE9	116 aa		3.04	□□□□□ -1.92
CNOT2-238	ENST00000552422		H0YAA0	97 aa		3.01	□□□□□ -1.93
CNOT2-238	ENST00000552422	C20orf197	Q8N268	126 aa		3.01	□□□□□ -1.93
CNOT2-238	ENST00000552422	SPRR2G	Q9BYE4	73 aa		3	□□□□□ -1.93
CNOT2-238	ENST00000552422	CYSTM1	Q9H1C7	97 aa		3	□□□□□ -1.93
CNOT2-238	ENST00000552422	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	2.99	□□□□□ -1.93
CNOT2-238	ENST00000552422	SNURF	Q9Y675	71 aa		2.99	□□□□□ -1.93
CNOT2-238	ENST00000552422		H7BZZ5	65 aa		2.98	□□□□□ -1.93
CNOT2-238	ENST00000552422	KRTAP19-6	Q3LI70	58 aa		2.97	□□□□□ -1.93
CNOT2-238	ENST00000552422	CRIPT	Q9P021	101 aa		2.97	□□□□□ -1.93
CNOT2-238	ENST00000552422	ACYP2	P14621	99 aa		2.96	□□□□□ -1.94
CNOT2-238	ENST00000552422	SPANXA2-OT1	Q8N9U9	137 aa		2.96	□□□□□ -1.94
CNOT2-238	ENST00000552422	TMEM258	P61165	79 aa		2.95	□□□□□ -1.94
CNOT2-238	ENST00000552422	KRTAP19-8	Q3LI54	63 aa		2.95	□□□□□ -1.94
CNOT2-238	ENST00000552422	ADM2	Q7Z4H4	148 aa		2.95	□□□□□ -1.94
CNOT2-238	ENST00000552422	MT1B	P07438	61 aa		2.94	□□□□□ -1.94
CNOT2-238	ENST00000552422		Q5VV11	94 aa		2.93	□□□□□ -1.94
CNOT2-238	ENST00000552422		P0C880	135 aa		2.91	□□□□□ -1.94
CNOT2-238	ENST00000552422	RPS28	P62857	69 aa	Known RBP	2.91	□□□□□ -1.94
CNOT2-238	ENST00000552422	CHKB-CPT1B	H3BT56	60 aa		2.9	□□□□□ -1.95
CNOT2-238	ENST00000552422	ATP5E	P56381	51 aa	Predicted RBP	2.9	□□□□□ -1.95
CNOT2-238	ENST00000552422	SPTSSB	Q8NFR3	76 aa		2.9	□□□□□ -1.95
CNOT2-238	ENST00000552422	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.88	□□□□□ -1.95
CNOT2-238	ENST00000552422	MACF1	Q9UPN3	7388 aa	Known RBP	2.88	□□□□□ -1.95
CNOT2-238	ENST00000552422	SERP1	Q9Y6X1	66 aa		2.87	□□□□□ -1.95
CNOT2-238	ENST00000552422		R4GN34	69 aa		2.87	□□□□□ -1.95
CNOT2-238	ENST00000552422	COA5	Q86WW8	74 aa		2.86	□□□□□ -1.95
CNOT2-238	ENST00000552422		A6NN06	94 aa		2.85	□□□□□ -1.95
CNOT2-238	ENST00000552422		M0QZ58	72 aa		2.85	□□□□□ -1.95
CNOT2-238	ENST00000552422	KRTAP5-2	Q701N4	177 aa		2.82	□□□□□ -1.96
CNOT2-238	ENST00000552422	SMIM26	A0A096LP01	95 aa		2.8	□□□□□ -1.96
CNOT2-238	ENST00000552422	LINC01554	Q52M75	96 aa		2.8	□□□□□ -1.96
CNOT2-238	ENST00000552422	PLAC4	Q8WY50	150 aa		2.8	□□□□□ -1.96
CNOT2-238	ENST00000552422	MT1X	P80297	61 aa		2.79	□□□□□ -1.96
CNOT2-238	ENST00000552422	SYNE2	Q8WXH0	6885 aa	Known RBP	2.79	□□□□□ -1.96
CNOT2-238	ENST00000552422	PRO2289	Q9P1D8	64 aa		2.78	□□□□□ -1.96
CNOT2-238	ENST00000552422		Q1T7F1	81 aa		2.76	□□□□□ -1.97
CNOT2-238	ENST00000552422	KRTAP13-4	Q3LI77	160 aa		2.76	□□□□□ -1.97

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms