RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 KRTAP9-6A0A140TA67 174 aa12.63□□□□□ -0.39
CHPT1-210ENST00000552351 KRTAP3-3Q9BYR6 98 aa12.62□□□□□ -0.39
CHPT1-210ENST00000552351 CRCT1Q9UGL9 99 aa12.61□□□□□ -0.39
CHPT1-210ENST00000552351 NDUFC1O43677 76 aa12.54□□□□□ -0.4
CHPT1-210ENST00000552351 DMAC1Q96GE9 116 aa12.51□□□□□ -0.41
CHPT1-210ENST00000552351 LCE2BO14633 110 aa12.49□□□□□ -0.41
CHPT1-210ENST00000552351 SERP2Q8N6R1 65 aa12.48□□□□□ -0.41
CHPT1-210ENST00000552351 USH2AO75445 5202 aa12.46□□□□□ -0.41
CHPT1-210ENST00000552351 SNURFQ9Y675 71 aa12.37□□□□□ -0.43
CHPT1-210ENST00000552351 H0YAA0 97 aa12.35□□□□□ -0.43
CHPT1-210ENST00000552351 C20orf197Q8N268 126 aa12.35□□□□□ -0.43
CHPT1-210ENST00000552351 ACYP2P14621 99 aa12.3□□□□□ -0.44
CHPT1-210ENST00000552351 SPANXA2-OT1Q8N9U9 137 aa12.25□□□□□ -0.45
CHPT1-210ENST00000552351 SSPOA2VEC9 5147 aa12.24□□□□□ -0.45
CHPT1-210ENST00000552351 KRTAP19-1Q8IUB9 90 aa12.24□□□□□ -0.45
CHPT1-210ENST00000552351 CRIPTQ9P021 101 aa12.23□□□□□ -0.45
CHPT1-210ENST00000552351 COX7CP15954 63 aa12.22□□□□□ -0.45
CHPT1-210ENST00000552351 SPRR2GQ9BYE4 73 aa12.21□□□□□ -0.46
CHPT1-210ENST00000552351 ADM2Q7Z4H4 148 aa12.13□□□□□ -0.47
CHPT1-210ENST00000552351 SPTSSBQ8NFR3 76 aa12.09□□□□□ -0.47
CHPT1-210ENST00000552351 CHKB-CPT1BH3BT56 60 aa12.05□□□□□ -0.48
CHPT1-210ENST00000552351 KRTAP19-6Q3LI70 58 aa12.04□□□□□ -0.48
CHPT1-210ENST00000552351 KRTAP19-8Q3LI54 63 aa12.03□□□□□ -0.48
CHPT1-210ENST00000552351 ANAPC13Q9BS18 74 aa12.01□□□□□ -0.49
CHPT1-210ENST00000552351 Q5VV11 94 aa11.99□□□□□ -0.49
CHPT1-210ENST00000552351 FCGBPQ9Y6R7 5405 aaPredicted RBP11.93□□□□□ -0.5
CHPT1-210ENST00000552351 H7BZZ5 65 aa11.93□□□□□ -0.5
CHPT1-210ENST00000552351 MT1BP07438 61 aa11.93□□□□□ -0.5
CHPT1-210ENST00000552351 P0C880 135 aa11.91□□□□□ -0.5
CHPT1-210ENST00000552351 KRTAP3-2Q9BYR7 98 aa11.89□□□□□ -0.51
CHPT1-210ENST00000552351 CYSTM1Q9H1C7 97 aa11.88□□□□□ -0.51
CHPT1-210ENST00000552351 R4GN34 69 aa11.83□□□□□ -0.52
CHPT1-210ENST00000552351 COA5Q86WW8 74 aa11.81□□□□□ -0.52
CHPT1-210ENST00000552351 M0QZ58 72 aa11.73□□□□□ -0.53
CHPT1-210ENST00000552351 CCDC179H3BU77 68 aa11.72□□□□□ -0.53
CHPT1-210ENST00000552351 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.7□□□□□ -0.54
CHPT1-210ENST00000552351 A6NN06 94 aa11.64□□□□□ -0.55
CHPT1-210ENST00000552351 KRTAP10-5P60370 271 aa11.59□□□□□ -0.55
CHPT1-210ENST00000552351 ATP5EP56381 51 aaPredicted RBP11.55□□□□□ -0.56
CHPT1-210ENST00000552351 PLAC4Q8WY50 150 aa11.55□□□□□ -0.56
CHPT1-210ENST00000552351 LINC01554Q52M75 96 aa11.5□□□□□ -0.57
CHPT1-210ENST00000552351 SEC61GP60059 68 aa11.49□□□□□ -0.57
CHPT1-210ENST00000552351 SERP1Q9Y6X1 66 aa11.45□□□□□ -0.58
CHPT1-210ENST00000552351 MACF1Q9UPN3 7388 aaKnown RBP11.44□□□□□ -0.58
CHPT1-210ENST00000552351 KRTAP9-7A8MTY7 169 aa11.42□□□□□ -0.58
CHPT1-210ENST00000552351 PRO2289Q9P1D8 64 aa11.4□□□□□ -0.58
CHPT1-210ENST00000552351 TMEM258P61165 79 aa11.4□□□□□ -0.59
CHPT1-210ENST00000552351 MT1XP80297 61 aa11.3□□□□□ -0.6
CHPT1-210ENST00000552351 KRTAP13-4Q3LI77 160 aa11.3□□□□□ -0.6
CHPT1-210ENST00000552351 SYNE2Q8WXH0 6885 aaKnown RBP11.25□□□□□ -0.61
CHPT1-210ENST00000552351 A0A1B0GU69 56 aa11.23□□□□□ -0.61
CHPT1-210ENST00000552351 A0A1B0GU33 70 aa11.22□□□□□ -0.61
CHPT1-210ENST00000552351 KRTAP6-3Q3LI67 103 aa11.13□□□□□ -0.63
CHPT1-210ENST00000552351 SPATA8Q6RVD6 105 aa11.07□□□□□ -0.64
CHPT1-210ENST00000552351 PRR15LQ9BU68 103 aa11.06□□□□□ -0.64
CHPT1-210ENST00000552351 LINC01558Q9Y6Z2 57 aa11.03□□□□□ -0.64
CHPT1-210ENST00000552351 KRTAP12-2P59991 146 aa11.01□□□□□ -0.65
CHPT1-210ENST00000552351 A0A0D9SG42 100 aa10.99□□□□□ -0.65
CHPT1-210ENST00000552351 CAMK2N1Q7Z7J9 78 aa10.94□□□□□ -0.66
CHPT1-210ENST00000552351 SMIM26A0A096LP01 95 aa10.93□□□□□ -0.66
CHPT1-210ENST00000552351 KRTAP5-9P26371 169 aa10.84□□□□□ -0.67
CHPT1-210ENST00000552351 KRTAP12-1P59990 96 aa10.83□□□□□ -0.68
CHPT1-210ENST00000552351 SPINT4Q6UDR6 99 aa10.83□□□□□ -0.68
CHPT1-210ENST00000552351 KMT2DO14686 5537 aa10.8□□□□□ -0.68
CHPT1-210ENST00000552351 PCP4P48539 62 aa10.78□□□□□ -0.68
CHPT1-210ENST00000552351 KRTAP10-12P60413 245 aa10.78□□□□□ -0.68
CHPT1-210ENST00000552351 KRTAP10-7P60409 375 aaPredicted RBP10.77□□□□□ -0.69
CHPT1-210ENST00000552351 A8MU10 97 aa10.74□□□□□ -0.69
CHPT1-210ENST00000552351 V9GYY9 64 aa10.72□□□□□ -0.69
CHPT1-210ENST00000552351 KRTAP8-1Q8IUC2 63 aa10.7□□□□□ -0.7
CHPT1-210ENST00000552351 UQCR11O14957 56 aa10.69□□□□□ -0.7
CHPT1-210ENST00000552351 MUC12Q9UKN1 5478 aa10.66□□□□□ -0.7
CHPT1-210ENST00000552351 Q1T7F1 81 aa10.63□□□□□ -0.71
CHPT1-210ENST00000552351 KRTAP4-8A0A0G2JLE6 195 aa10.63□□□□□ -0.71
CHPT1-210ENST00000552351 KRTAP4-8Q9BYQ9 185 aa10.63□□□□□ -0.71
CHPT1-210ENST00000552351 SPRR2FQ96RM1 72 aa10.58□□□□□ -0.72
CHPT1-210ENST00000552351 RPS28P62857 69 aaKnown RBP10.53□□□□□ -0.72
CHPT1-210ENST00000552351 NEBP20929 6669 aa10.5□□□□□ -0.73
CHPT1-210ENST00000552351 PSPHP1O15172 72 aa10.48□□□□□ -0.73
CHPT1-210ENST00000552351 MDN1Q9NU22 5596 aa10.47□□□□□ -0.73
CHPT1-210ENST00000552351 MIR22HGQ0VDD5 57 aa10.46□□□□□ -0.74
CHPT1-210ENST00000552351 SPRR2EP22531 72 aa10.3□□□□□ -0.76
CHPT1-210ENST00000552351 SPRR2BP35325 72 aa10.3□□□□□ -0.76
CHPT1-210ENST00000552351 SPRR2AP35326 72 aa10.3□□□□□ -0.76
CHPT1-210ENST00000552351 C10orf95Q9H7T3 257 aa10.29□□□□□ -0.76
CHPT1-210ENST00000552351 LCE1AQ5T7P2 110 aa10.25□□□□□ -0.77
CHPT1-210ENST00000552351 TNP1P09430 55 aa10.23□□□□□ -0.77
CHPT1-210ENST00000552351 K7ERS5 55 aa10.23□□□□□ -0.77
CHPT1-210ENST00000552351 A6NED7 52 aa10.19□□□□□ -0.78
CHPT1-210ENST00000552351 KRTAP19-7Q3SYF9 63 aa10.11□□□□□ -0.79
CHPT1-210ENST00000552351 KRTAP20-1Q3LI63 56 aa10.06□□□□□ -0.8
CHPT1-210ENST00000552351 MT1EP04732 61 aa9.99□□□□□ -0.81
CHPT1-210ENST00000552351 LCE3AQ5TA76 89 aa9.96□□□□□ -0.82
CHPT1-210ENST00000552351 KRTAP2-3P0C7H8 128 aa9.95□□□□□ -0.82
CHPT1-210ENST00000552351 SPRR2DP22532 72 aa9.95□□□□□ -0.82
CHPT1-210ENST00000552351 KRTAP19-5Q3LI72 72 aa9.95□□□□□ -0.82
CHPT1-210ENST00000552351 KRTAP2-4Q9BYR9 128 aa9.95□□□□□ -0.82
CHPT1-210ENST00000552351 KRTAP25-1Q3LHN0 102 aa9.91□□□□□ -0.82
CHPT1-210ENST00000552351 CDC42SE1Q9NRR8 79 aa9.86□□□□□ -0.83
CHPT1-210ENST00000552351 KRTAP19-3Q7Z4W3 81 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms