RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SMCO4Q9NRQ5 59 aa-0.29□□□□□ -2.46
LSM6P2-201ENST00000552208 THOC2Q8NI27 1593 aaKnown RBP-0.29□□□□□ -2.46
LSM6P2-201ENST00000552208 MT1BP07438 61 aa-0.3□□□□□ -2.46
LSM6P2-201ENST00000552208 KRTAP8-1Q8IUC2 63 aa-0.3□□□□□ -2.46
LSM6P2-201ENST00000552208 PARP4Q9UKK3 1724 aaKnown RBP-0.3□□□□□ -2.46
LSM6P2-201ENST00000552208 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
LSM6P2-201ENST00000552208 UBL5Q9BZL1 73 aa-0.31□□□□□ -2.46
LSM6P2-201ENST00000552208 DNAH17Q9UFH2 4485 aa-0.31□□□□□ -2.46
LSM6P2-201ENST00000552208 ASXL1Q8IXJ9 1541 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 DUOX2Q9NRD8 1548 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 MRPL33O75394 65 aaKnown RBP-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 DEFB130BP0DP73 79 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 DEFB130AP0DP74 79 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 DNAH11Q96DT5 4516 aa-0.32□□□□□ -2.46
LSM6P2-201ENST00000552208 ITSN1Q15811 1721 aa-0.33□□□□□ -2.46
LSM6P2-201ENST00000552208 PDCD5O14737 125 aa-0.33□□□□□ -2.46
LSM6P2-201ENST00000552208 IAPPP10997 89 aa-0.33□□□□□ -2.46
LSM6P2-201ENST00000552208 ZC3H13Q5T200 1668 aaKnown RBP-0.33□□□□□ -2.46
LSM6P2-201ENST00000552208 DNAH8Q96JB1 4490 aa-0.34□□□□□ -2.46
LSM6P2-201ENST00000552208 CRIP1P50238 77 aa-0.34□□□□□ -2.46
LSM6P2-201ENST00000552208 HILPDAQ9Y5L2 63 aa-0.34□□□□□ -2.46
LSM6P2-201ENST00000552208 INO80Q9ULG1 1556 aaPredicted RBP-0.35□□□□□ -2.47
LSM6P2-201ENST00000552208 DNAH2Q9P225 4427 aa-0.35□□□□□ -2.47
LSM6P2-201ENST00000552208 EEA1Q15075 1411 aa-0.36□□□□□ -2.47
LSM6P2-201ENST00000552208 ATXN8Q156A1 80 aa-0.36□□□□□ -2.47
LSM6P2-201ENST00000552208 ABCA9Q8IUA7 1624 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 NRAPQ86VF7 1730 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 MT1FP04733 61 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 KRTAP19-2Q3LHN2 52 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 NHSQ6T4R5 1651 aa-0.37□□□□□ -2.47
LSM6P2-201ENST00000552208 ETDCA0A1B0GVM5 59 aa-0.38□□□□□ -2.47
LSM6P2-201ENST00000552208 MT1HL1P0DM35 61 aa-0.38□□□□□ -2.47
LSM6P2-201ENST00000552208 PRLHP81277 87 aa-0.39□□□□□ -2.47
LSM6P2-201ENST00000552208 MT2AP02795 61 aa-0.4□□□□□ -2.47
LSM6P2-201ENST00000552208 DEFB114Q30KQ6 69 aa-0.4□□□□□ -2.47
LSM6P2-201ENST00000552208 DEFB104AQ8WTQ1 72 aa-0.41□□□□□ -2.48
LSM6P2-201ENST00000552208 C9orf92A6NGG3 77 aa-0.44□□□□□ -2.48
LSM6P2-201ENST00000552208 DNMBPQ6XZF7 1577 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 UGGT1Q9NYU2 1555 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 PREX2Q70Z35 1606 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 ITSN2Q9NZM3 1697 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 H3BNG1 76 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 MT1GP13640 62 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 MT1MQ8N339 61 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 S4R3F8 94 aa-0.45□□□□□ -2.48
LSM6P2-201ENST00000552208 GNG13Q9P2W3 67 aa-0.46□□□□□ -2.48
LSM6P2-201ENST00000552208 MADDQ8WXG6 1647 aa-0.46□□□□□ -2.48
LSM6P2-201ENST00000552208 C3P01024 1663 aa-0.46□□□□□ -2.48
LSM6P2-201ENST00000552208 MT1AP04731 61 aa-0.47□□□□□ -2.48
LSM6P2-201ENST00000552208 ABCC6O95255 1503 aa-0.48□□□□□ -2.49
LSM6P2-201ENST00000552208 DEFB106AQ8N104 65 aa-0.48□□□□□ -2.49
LSM6P2-201ENST00000552208 EFCAB5A4FU69 1503 aa-0.48□□□□□ -2.49
LSM6P2-201ENST00000552208 RPS27P42677 84 aaKnown RBP-0.49□□□□□ -2.49
LSM6P2-201ENST00000552208 RPS27LQ71UM5 84 aaKnown RBP-0.49□□□□□ -2.49
LSM6P2-201ENST00000552208 CPS1P31327 1500 aa-0.49□□□□□ -2.49
LSM6P2-201ENST00000552208 MT1EP04732 61 aa-0.51□□□□□ -2.49
LSM6P2-201ENST00000552208 WT1-ASQ06250 92 aa-0.51□□□□□ -2.49
LSM6P2-201ENST00000552208 MINOS1Q5TGZ0 78 aa-0.51□□□□□ -2.49
LSM6P2-201ENST00000552208 NRXN3Q9Y4C0 1643 aa-0.51□□□□□ -2.49
LSM6P2-201ENST00000552208 NFAT5O94916 1531 aa-0.52□□□□□ -2.49
LSM6P2-201ENST00000552208 LY75O60449 1722 aa-0.52□□□□□ -2.49
LSM6P2-201ENST00000552208 CROCC2H7BZ55 1655 aa-0.53□□□□□ -2.49
LSM6P2-201ENST00000552208 LINC01549A6NIU2 74 aa-0.53□□□□□ -2.49
LSM6P2-201ENST00000552208 MROH1Q8NDA8 1641 aa-0.53□□□□□ -2.49
LSM6P2-201ENST00000552208 KIF1AQ12756 1690 aa-0.55□□□□□ -2.5
LSM6P2-201ENST00000552208 MT1XP80297 61 aa-0.55□□□□□ -2.5
LSM6P2-201ENST00000552208 ABCA6Q8N139 1617 aa-0.56□□□□□ -2.5
LSM6P2-201ENST00000552208 MAST1Q9Y2H9 1570 aa-0.57□□□□□ -2.5
LSM6P2-201ENST00000552208 NCBP2-AS2Q69YL0 99 aa-0.57□□□□□ -2.5
LSM6P2-201ENST00000552208 C6orf48Q9UBA6 75 aa-0.57□□□□□ -2.5
LSM6P2-201ENST00000552208 KIF21BO75037 1637 aa-0.57□□□□□ -2.5
LSM6P2-201ENST00000552208 A0A087WWC5 75 aa-0.58□□□□□ -2.5
LSM6P2-201ENST00000552208 DEFB124Q8NES8 71 aa-0.58□□□□□ -2.5
LSM6P2-201ENST00000552208 MT1LQ93083 61 aa-0.58□□□□□ -2.5
LSM6P2-201ENST00000552208 TIAM1Q13009 1591 aa-0.58□□□□□ -2.5
LSM6P2-201ENST00000552208 ANKRD36CQ5JPF3 1778 aa-0.6□□□□□ -2.5
LSM6P2-201ENST00000552208 ADCY10Q96PN6 1610 aa-0.6□□□□□ -2.51
LSM6P2-201ENST00000552208 TOGARAM1Q9Y4F4 1720 aa-0.61□□□□□ -2.51
LSM6P2-201ENST00000552208 K7EMI3 77 aa-0.62□□□□□ -2.51
LSM6P2-201ENST00000552208 GLI2P10070 1586 aa-0.62□□□□□ -2.51
LSM6P2-201ENST00000552208 FCER1GP30273 86 aa-0.63□□□□□ -2.51
LSM6P2-201ENST00000552208 RPS29P62273 56 aaKnown RBP-0.63□□□□□ -2.51
LSM6P2-201ENST00000552208 CCDC180Q9P1Z9 1646 aa-0.64□□□□□ -2.51
LSM6P2-201ENST00000552208 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.64□□□□□ -2.51
LSM6P2-201ENST00000552208 IGLV5-48A0A075B6I7 105 aa-0.66□□□□□ -2.52
LSM6P2-201ENST00000552208 IQGAP1P46940 1657 aa-0.66□□□□□ -2.52
LSM6P2-201ENST00000552208 ALS2Q96Q42 1657 aa-0.66□□□□□ -2.52
LSM6P2-201ENST00000552208 M0R1W7 72 aa-0.67□□□□□ -2.52
LSM6P2-201ENST00000552208 SFTA3P0C7M3 94 aa-0.67□□□□□ -2.52
LSM6P2-201ENST00000552208 H3BUA1 57 aa-0.68□□□□□ -2.52
LSM6P2-201ENST00000552208 KRTAP19-5Q3LI72 72 aa-0.68□□□□□ -2.52
LSM6P2-201ENST00000552208 AGLP35573 1532 aa-0.69□□□□□ -2.52
LSM6P2-201ENST00000552208 MROH2BQ7Z745 1585 aa-0.7□□□□□ -2.52
LSM6P2-201ENST00000552208 DEFB110Q30KQ9 67 aa-0.7□□□□□ -2.52
LSM6P2-201ENST00000552208 CDC42BPAQ5VT25 1732 aa-0.71□□□□□ -2.52
LSM6P2-201ENST00000552208 SMIM31A0A1B0GVY4 71 aa-0.71□□□□□ -2.52
LSM6P2-201ENST00000552208 IGIPA6NJ69 53 aa-0.71□□□□□ -2.52
LSM6P2-201ENST00000552208 CLTCL1P53675 1640 aa-0.72□□□□□ -2.52
LSM6P2-201ENST00000552208 DEFB4AO15263 64 aa-0.73□□□□□ -2.53
LSM6P2-201ENST00000552208 LMO7Q8WWI1 1683 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms