RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 FAM236BA0A1B0GV22 79 aa7.05□□□□□ -1.28
BRF1-220ENST00000552127 CSAG1Q6PB30 78 aa7.05□□□□□ -1.28
BRF1-220ENST00000552127 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
BRF1-220ENST00000552127 CYP4F30PQ9H0H9 118 aa7.04□□□□□ -1.28
BRF1-220ENST00000552127 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
BRF1-220ENST00000552127 HIST1H4AP62805 103 aaKnown RBP7□□□□□ -1.29
BRF1-220ENST00000552127 LINC00643Q86TS7 51 aa7□□□□□ -1.29
BRF1-220ENST00000552127 K7ERU9 68 aa6.99□□□□□ -1.29
BRF1-220ENST00000552127 KRTAP2-2Q9BYT5 123 aa6.98□□□□□ -1.29
BRF1-220ENST00000552127 KRTAP2-1Q9BYU5 128 aa6.98□□□□□ -1.29
BRF1-220ENST00000552127 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
BRF1-220ENST00000552127 UQCRQO14949 82 aa6.95□□□□□ -1.3
BRF1-220ENST00000552127 H0Y9P7 68 aa6.94□□□□□ -1.3
BRF1-220ENST00000552127 ATOX1O00244 68 aa6.93□□□□□ -1.3
BRF1-220ENST00000552127 SPRR2GQ9BYE4 73 aa6.93□□□□□ -1.3
BRF1-220ENST00000552127 A0A087WVE0 104 aa6.91□□□□□ -1.3
BRF1-220ENST00000552127 KLKP1Q107X0 134 aa6.91□□□□□ -1.3
BRF1-220ENST00000552127 MT1BP07438 61 aa6.9□□□□□ -1.3
BRF1-220ENST00000552127 Q5VV11 94 aa6.9□□□□□ -1.3
BRF1-220ENST00000552127 GPR98Q8WXG9 6306 aa6.9□□□□□ -1.31
BRF1-220ENST00000552127 SPRR2EP22531 72 aa6.89□□□□□ -1.31
BRF1-220ENST00000552127 SPRR2BP35325 72 aa6.89□□□□□ -1.31
BRF1-220ENST00000552127 SPRR2AP35326 72 aa6.89□□□□□ -1.31
BRF1-220ENST00000552127 KRTAP19-8Q3LI54 63 aa6.89□□□□□ -1.31
BRF1-220ENST00000552127 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
BRF1-220ENST00000552127 MT-ATP8P03928 68 aa6.85□□□□□ -1.31
BRF1-220ENST00000552127 NDUFC1O43677 76 aa6.81□□□□□ -1.32
BRF1-220ENST00000552127 LINC00208Q96KT6 92 aa6.81□□□□□ -1.32
BRF1-220ENST00000552127 IMUPQ9GZP8 106 aa6.81□□□□□ -1.32
BRF1-220ENST00000552127 CRIPTQ9P021 101 aa6.81□□□□□ -1.32
BRF1-220ENST00000552127 A8MUN3 132 aa6.8□□□□□ -1.32
BRF1-220ENST00000552127 SPRR2FQ96RM1 72 aa6.8□□□□□ -1.32
BRF1-220ENST00000552127 OCR1Q9BZK8 76 aa6.8□□□□□ -1.32
BRF1-220ENST00000552127 MP68P56378 58 aa6.78□□□□□ -1.32
BRF1-220ENST00000552127 H0YAA0 97 aa6.77□□□□□ -1.33
BRF1-220ENST00000552127 SCGB1A1P11684 91 aa6.7□□□□□ -1.34
BRF1-220ENST00000552127 LCE1AQ5T7P2 110 aa6.69□□□□□ -1.34
BRF1-220ENST00000552127 H3BPC8 53 aa6.68□□□□□ -1.34
BRF1-220ENST00000552127 ADM2Q7Z4H4 148 aa6.68□□□□□ -1.34
BRF1-220ENST00000552127 SPRR2DP22532 72 aa6.67□□□□□ -1.34
BRF1-220ENST00000552127 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
BRF1-220ENST00000552127 TRAV7A0A075B6U4 112 aa6.58□□□□□ -1.36
BRF1-220ENST00000552127 SMIM20Q8N5G0 67 aa6.58□□□□□ -1.36
BRF1-220ENST00000552127 LCE3BQ5TA77 95 aa6.56□□□□□ -1.36
BRF1-220ENST00000552127 C20orf197Q8N268 126 aa6.54□□□□□ -1.36
BRF1-220ENST00000552127 P0C880 135 aa6.53□□□□□ -1.36
BRF1-220ENST00000552127 R4GN34 69 aa6.52□□□□□ -1.37
BRF1-220ENST00000552127 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
BRF1-220ENST00000552127 SERP2Q8N6R1 65 aa6.49□□□□□ -1.37
BRF1-220ENST00000552127 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
BRF1-220ENST00000552127 PLAC4Q8WY50 150 aa6.48□□□□□ -1.37
BRF1-220ENST00000552127 PRO2289Q9P1D8 64 aa6.48□□□□□ -1.37
BRF1-220ENST00000552127 M0QZ58 72 aa6.47□□□□□ -1.37
BRF1-220ENST00000552127 MT1XP80297 61 aa6.47□□□□□ -1.37
BRF1-220ENST00000552127 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
BRF1-220ENST00000552127 SNURFQ9Y675 71 aa6.45□□□□□ -1.38
BRF1-220ENST00000552127 ACYP2P14621 99 aa6.42□□□□□ -1.38
BRF1-220ENST00000552127 COX7CP15954 63 aa6.4□□□□□ -1.38
BRF1-220ENST00000552127 ANAPC13Q9BS18 74 aa6.38□□□□□ -1.39
BRF1-220ENST00000552127 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
BRF1-220ENST00000552127 SPTSSBQ8NFR3 76 aa6.37□□□□□ -1.39
BRF1-220ENST00000552127 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
BRF1-220ENST00000552127 CHKB-CPT1BH3BT56 60 aa6.32□□□□□ -1.4
BRF1-220ENST00000552127 PCP4P48539 62 aa6.32□□□□□ -1.4
BRF1-220ENST00000552127 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
BRF1-220ENST00000552127 CYSTM1Q9H1C7 97 aa6.29□□□□□ -1.4
BRF1-220ENST00000552127 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
BRF1-220ENST00000552127 SPANXA2-OT1Q8N9U9 137 aa6.26□□□□□ -1.41
BRF1-220ENST00000552127 KRTAP4-8A0A0G2JLE6 195 aa6.25□□□□□ -1.41
BRF1-220ENST00000552127 KRTAP4-8Q9BYQ9 185 aa6.25□□□□□ -1.41
BRF1-220ENST00000552127 H7BZZ5 65 aa6.22□□□□□ -1.41
BRF1-220ENST00000552127 KRTAP10-7P60409 375 aaPredicted RBP6.16□□□□□ -1.42
BRF1-220ENST00000552127 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
BRF1-220ENST00000552127 KRTAP13-4Q3LI77 160 aa6.1□□□□□ -1.43
BRF1-220ENST00000552127 COA5Q86WW8 74 aa6.1□□□□□ -1.43
BRF1-220ENST00000552127 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
BRF1-220ENST00000552127 HMCN1Q96RW7 5635 aa6.08□□□□□ -1.44
BRF1-220ENST00000552127 KRTAP5-10Q6L8G5 202 aa6.05□□□□□ -1.44
BRF1-220ENST00000552127 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
BRF1-220ENST00000552127 ATP5EP56381 51 aaPredicted RBP6.03□□□□□ -1.44
BRF1-220ENST00000552127 TMEM258P61165 79 aa6.02□□□□□ -1.45
BRF1-220ENST00000552127 CAMK2N1Q7Z7J9 78 aa5.99□□□□□ -1.45
BRF1-220ENST00000552127 SEC61GP60059 68 aa5.97□□□□□ -1.45
BRF1-220ENST00000552127 SERP1Q9Y6X1 66 aa5.96□□□□□ -1.46
BRF1-220ENST00000552127 MT4P47944 62 aa5.92□□□□□ -1.46
BRF1-220ENST00000552127 KRTAP5-7Q6L8G8 165 aa5.92□□□□□ -1.46
BRF1-220ENST00000552127 A0A0D9SG42 100 aa5.91□□□□□ -1.46
BRF1-220ENST00000552127 SPATA8Q6RVD6 105 aa5.89□□□□□ -1.47
BRF1-220ENST00000552127 A0A1B0GU33 70 aa5.87□□□□□ -1.47
BRF1-220ENST00000552127 LCE5AQ5TCM9 118 aa5.83□□□□□ -1.48
BRF1-220ENST00000552127 LCE4AQ5TA78 99 aa5.82□□□□□ -1.48
BRF1-220ENST00000552127 SPINT4Q6UDR6 99 aa5.82□□□□□ -1.48
BRF1-220ENST00000552127 KRTAP12-1P59990 96 aa5.79□□□□□ -1.48
BRF1-220ENST00000552127 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
BRF1-220ENST00000552127 KRTAP19-7Q3SYF9 63 aa5.78□□□□□ -1.48
BRF1-220ENST00000552127 A0A1B0GU69 56 aa5.77□□□□□ -1.49
BRF1-220ENST00000552127 MT1EP04732 61 aa5.73□□□□□ -1.49
BRF1-220ENST00000552127 SMIM26A0A096LP01 95 aa5.72□□□□□ -1.49
BRF1-220ENST00000552127 H3BS24 57 aa5.72□□□□□ -1.49
BRF1-220ENST00000552127 KRTAP5-3Q6L8H2 238 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms