RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 LCA10Q71F78 164 aa5.18□□□□□ -1.58
SNRPF-204ENST00000552085 MT1XP80297 61 aa5.17□□□□□ -1.58
SNRPF-204ENST00000552085 KRTAP5-7Q6L8G8 165 aa5.17□□□□□ -1.58
SNRPF-204ENST00000552085 NREPQ16612 68 aa5.16□□□□□ -1.58
SNRPF-204ENST00000552085 VAMP8Q9BV40 100 aa5.16□□□□□ -1.58
SNRPF-204ENST00000552085 SCGB1C2P0DMR2 95 aa5.15□□□□□ -1.59
SNRPF-204ENST00000552085 HSD52Q0P140 79 aa5.15□□□□□ -1.59
SNRPF-204ENST00000552085 AHNAK2Q8IVF2 5795 aa5.14□□□□□ -1.59
SNRPF-204ENST00000552085 HMCN1Q96RW7 5635 aa5.13□□□□□ -1.59
SNRPF-204ENST00000552085 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
SNRPF-204ENST00000552085 K7EQZ3 153 aa5.13□□□□□ -1.59
SNRPF-204ENST00000552085 S100A1P23297 94 aa5.11□□□□□ -1.59
SNRPF-204ENST00000552085 C1orf64Q8NEQ6 169 aa5.1□□□□□ -1.59
SNRPF-204ENST00000552085 CXCL6P80162 114 aa5.09□□□□□ -1.59
SNRPF-204ENST00000552085 HCG22E2RYF7 251 aa5.07□□□□□ -1.6
SNRPF-204ENST00000552085 C14orf132Q9NPU4 83 aa5.07□□□□□ -1.6
SNRPF-204ENST00000552085 SPRR5A0A1B0GTR4 108 aa5.06□□□□□ -1.6
SNRPF-204ENST00000552085 MT4P47944 62 aa5.05□□□□□ -1.6
SNRPF-204ENST00000552085 ATXN8Q156A1 80 aa5.05□□□□□ -1.6
SNRPF-204ENST00000552085 CASC2Q6XLA1 102 aa5.05□□□□□ -1.6
SNRPF-204ENST00000552085 BPY2O14599 106 aa5.03□□□□□ -1.6
SNRPF-204ENST00000552085 TMA7Q9Y2S6 64 aaKnown RBP5.01□□□□□ -1.61
SNRPF-204ENST00000552085 KRTAP15-1Q3LI76 137 aa5□□□□□ -1.61
SNRPF-204ENST00000552085 H0YAA0 97 aa4.97□□□□□ -1.61
SNRPF-204ENST00000552085 Q8N9L7 120 aa4.96□□□□□ -1.62
SNRPF-204ENST00000552085 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
SNRPF-204ENST00000552085 A8MUN3 132 aa4.94□□□□□ -1.62
SNRPF-204ENST00000552085 UQCR10Q9UDW1 63 aa4.94□□□□□ -1.62
SNRPF-204ENST00000552085 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
SNRPF-204ENST00000552085 KRTAP10-12P60413 245 aa4.9□□□□□ -1.63
SNRPF-204ENST00000552085 A0A087WVE0 104 aa4.89□□□□□ -1.63
SNRPF-204ENST00000552085 PYY3Q5JQD4 70 aa4.89□□□□□ -1.63
SNRPF-204ENST00000552085 TP53AIP1Q9HCN2 124 aa4.88□□□□□ -1.63
SNRPF-204ENST00000552085 NDUFC1O43677 76 aa4.86□□□□□ -1.63
SNRPF-204ENST00000552085 NAA38Q9BRA0 125 aaKnown RBP4.86□□□□□ -1.63
SNRPF-204ENST00000552085 ADM2Q7Z4H4 148 aa4.84□□□□□ -1.63
SNRPF-204ENST00000552085 CYP4F30PQ9H0H9 118 aa4.84□□□□□ -1.63
SNRPF-204ENST00000552085 H3BT86 120 aa4.82□□□□□ -1.64
SNRPF-204ENST00000552085 M0R143 59 aa4.8□□□□□ -1.64
SNRPF-204ENST00000552085 R4GN34 69 aa4.78□□□□□ -1.64
SNRPF-204ENST00000552085 TSTD3H0UI37 97 aa4.77□□□□□ -1.65
SNRPF-204ENST00000552085 KRTAP19-3Q7Z4W3 81 aa4.77□□□□□ -1.65
SNRPF-204ENST00000552085 UBL5Q9BZL1 73 aa4.75□□□□□ -1.65
SNRPF-204ENST00000552085 KRTAP5-4Q6L8H1 288 aa4.74□□□□□ -1.65
SNRPF-204ENST00000552085 CYSTM1Q9H1C7 97 aa4.74□□□□□ -1.65
SNRPF-204ENST00000552085 LOC101927531A0A1B0GV80 90 aa4.73□□□□□ -1.65
SNRPF-204ENST00000552085 TRAV22A0A0B4J277 110 aa4.7□□□□□ -1.66
SNRPF-204ENST00000552085 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
SNRPF-204ENST00000552085 K7EP34 96 aa4.69□□□□□ -1.66
SNRPF-204ENST00000552085 M0QZ58 72 aa4.69□□□□□ -1.66
SNRPF-204ENST00000552085 ACYP1P07311 99 aa4.69□□□□□ -1.66
SNRPF-204ENST00000552085 P0C880 135 aa4.67□□□□□ -1.66
SNRPF-204ENST00000552085 MT1EP04732 61 aa4.64□□□□□ -1.67
SNRPF-204ENST00000552085 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
SNRPF-204ENST00000552085 A0A1W2PPM0 123 aa4.62□□□□□ -1.67
SNRPF-204ENST00000552085 LINC01554Q52M75 96 aa4.62□□□□□ -1.67
SNRPF-204ENST00000552085 ATOX1O00244 68 aa4.59□□□□□ -1.67
SNRPF-204ENST00000552085 SPCS1Q9Y6A9 102 aa4.59□□□□□ -1.67
SNRPF-204ENST00000552085 MT1GP13640 62 aa4.56□□□□□ -1.68
SNRPF-204ENST00000552085 TAX1BP3O14907 124 aa4.55□□□□□ -1.68
SNRPF-204ENST00000552085 BATFQ16520 125 aa4.55□□□□□ -1.68
SNRPF-204ENST00000552085 UQCRQO14949 82 aa4.54□□□□□ -1.68
SNRPF-204ENST00000552085 PP632Q6XCG6 107 aa4.54□□□□□ -1.68
SNRPF-204ENST00000552085 H0Y9P7 68 aa4.53□□□□□ -1.68
SNRPF-204ENST00000552085 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.68
SNRPF-204ENST00000552085 MT1MQ8N339 61 aa4.48□□□□□ -1.69
SNRPF-204ENST00000552085 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
SNRPF-204ENST00000552085 PRO0461Q9UI25 63 aa4.47□□□□□ -1.69
SNRPF-204ENST00000552085 MT-ATP8P03928 68 aa4.46□□□□□ -1.7
SNRPF-204ENST00000552085 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
SNRPF-204ENST00000552085 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
SNRPF-204ENST00000552085 LINC00208Q96KT6 92 aa4.42□□□□□ -1.7
SNRPF-204ENST00000552085 KRTAP4-3Q9BYR4 195 aa4.41□□□□□ -1.7
SNRPF-204ENST00000552085 SMIM6P0DI80 62 aa4.4□□□□□ -1.71
SNRPF-204ENST00000552085 KRTAP5-11Q6L8G4 156 aa4.4□□□□□ -1.71
SNRPF-204ENST00000552085 DMAC1Q96GE9 116 aa4.38□□□□□ -1.71
SNRPF-204ENST00000552085 MP68P56378 58 aa4.35□□□□□ -1.71
SNRPF-204ENST00000552085 ATP5EP2Q5VTU8 51 aa4.35□□□□□ -1.71
SNRPF-204ENST00000552085 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.71
SNRPF-204ENST00000552085 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
SNRPF-204ENST00000552085 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
SNRPF-204ENST00000552085 MUC5BQ9HC84 5762 aaPredicted RBP4.31□□□□□ -1.72
SNRPF-204ENST00000552085 ETDBQ3ZM63 59 aa4.3□□□□□ -1.72
SNRPF-204ENST00000552085 MT1LQ93083 61 aa4.3□□□□□ -1.72
SNRPF-204ENST00000552085 TRAV7A0A075B6U4 112 aa4.29□□□□□ -1.72
SNRPF-204ENST00000552085 F8W1H4 67 aa4.29□□□□□ -1.72
SNRPF-204ENST00000552085 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
SNRPF-204ENST00000552085 OCR1Q9BZK8 76 aa4.28□□□□□ -1.72
SNRPF-204ENST00000552085 KRTAP5-8O75690 187 aa4.27□□□□□ -1.73
SNRPF-204ENST00000552085 H3BPC8 53 aa4.26□□□□□ -1.73
SNRPF-204ENST00000552085 COL5A1-AS1Q5SY13 56 aa4.25□□□□□ -1.73
SNRPF-204ENST00000552085 SPTSSBQ8NFR3 76 aa4.24□□□□□ -1.73
SNRPF-204ENST00000552085 A0A0D9SG42 100 aa4.23□□□□□ -1.73
SNRPF-204ENST00000552085 FAM240AA0A1B0GVK7 77 aa4.23□□□□□ -1.73
SNRPF-204ENST00000552085 GTF2H5Q6ZYL4 71 aa4.23□□□□□ -1.73
SNRPF-204ENST00000552085 ACYP2P14621 99 aa4.19□□□□□ -1.74
SNRPF-204ENST00000552085 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
SNRPF-204ENST00000552085 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
SNRPF-204ENST00000552085 LINC00643Q86TS7 51 aa4.14□□□□□ -1.75
SNRPF-204ENST00000552085 SVIPQ8NHG7 77 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms