RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 LCE1AQ5T7P2 110 aa5.99□□□□□ -1.45
CHMP1A-210ENST00000551981 UBL5Q9BZL1 73 aa5.99□□□□□ -1.45
CHMP1A-210ENST00000551981 BATFQ16520 125 aa5.96□□□□□ -1.46
CHMP1A-210ENST00000551981 A0A087WVE0 104 aa5.95□□□□□ -1.46
CHMP1A-210ENST00000551981 H0YAA0 97 aa5.95□□□□□ -1.46
CHMP1A-210ENST00000551981 SPRR2DP22532 72 aa5.95□□□□□ -1.46
CHMP1A-210ENST00000551981 MT1XP80297 61 aa5.95□□□□□ -1.46
CHMP1A-210ENST00000551981 A0A1W2PPM0 123 aa5.94□□□□□ -1.46
CHMP1A-210ENST00000551981 C9orf118A6NHY6 69 aa5.94□□□□□ -1.46
CHMP1A-210ENST00000551981 A8MUN3 132 aa5.94□□□□□ -1.46
CHMP1A-210ENST00000551981 CYP4F30PQ9H0H9 118 aa5.94□□□□□ -1.46
CHMP1A-210ENST00000551981 NDUFC1O43677 76 aa5.92□□□□□ -1.46
CHMP1A-210ENST00000551981 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
CHMP1A-210ENST00000551981 KRTAP12-2P59991 146 aa5.9□□□□□ -1.46
CHMP1A-210ENST00000551981 GPR98Q8WXG9 6306 aa5.88□□□□□ -1.47
CHMP1A-210ENST00000551981 ADM2Q7Z4H4 148 aa5.88□□□□□ -1.47
CHMP1A-210ENST00000551981 LOC101927531A0A1B0GV80 90 aa5.87□□□□□ -1.47
CHMP1A-210ENST00000551981 TAX1BP3O14907 124 aa5.86□□□□□ -1.47
CHMP1A-210ENST00000551981 TRAV22A0A0B4J277 110 aa5.84□□□□□ -1.47
CHMP1A-210ENST00000551981 K7EP34 96 aa5.83□□□□□ -1.48
CHMP1A-210ENST00000551981 SPCS1Q9Y6A9 102 aa5.83□□□□□ -1.48
CHMP1A-210ENST00000551981 LCE3BQ5TA77 95 aa5.81□□□□□ -1.48
CHMP1A-210ENST00000551981 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
CHMP1A-210ENST00000551981 ACYP1P07311 99 aa5.79□□□□□ -1.48
CHMP1A-210ENST00000551981 KRTAP4-8Q9BYQ9 185 aa5.79□□□□□ -1.48
CHMP1A-210ENST00000551981 R4GN34 69 aa5.78□□□□□ -1.48
CHMP1A-210ENST00000551981 C20orf197Q8N268 126 aa5.73□□□□□ -1.49
CHMP1A-210ENST00000551981 PRO0461Q9UI25 63 aa5.73□□□□□ -1.49
CHMP1A-210ENST00000551981 ATOX1O00244 68 aa5.72□□□□□ -1.49
CHMP1A-210ENST00000551981 M0QZ58 72 aa5.71□□□□□ -1.5
CHMP1A-210ENST00000551981 PCP4L1A6NKN8 68 aa5.69□□□□□ -1.5
CHMP1A-210ENST00000551981 H0Y9P7 68 aa5.69□□□□□ -1.5
CHMP1A-210ENST00000551981 UQCRQO14949 82 aa5.68□□□□□ -1.5
CHMP1A-210ENST00000551981 COL5A1-AS1Q5SY13 56 aa5.67□□□□□ -1.5
CHMP1A-210ENST00000551981 P0C880 135 aa5.66□□□□□ -1.5
CHMP1A-210ENST00000551981 KRTAP10-7P60409 375 aaPredicted RBP5.66□□□□□ -1.5
CHMP1A-210ENST00000551981 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
CHMP1A-210ENST00000551981 LINC01554Q52M75 96 aa5.65□□□□□ -1.5
CHMP1A-210ENST00000551981 DSTQ03001 7570 aaKnown RBP5.65□□□□□ -1.51
CHMP1A-210ENST00000551981 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
CHMP1A-210ENST00000551981 LINC00208Q96KT6 92 aa5.57□□□□□ -1.52
CHMP1A-210ENST00000551981 ETDBQ3ZM63 59 aa5.56□□□□□ -1.52
CHMP1A-210ENST00000551981 ATP5EP2Q5VTU8 51 aa5.55□□□□□ -1.52
CHMP1A-210ENST00000551981 F8W1H4 67 aa5.54□□□□□ -1.52
CHMP1A-210ENST00000551981 GTF2H5Q6ZYL4 71 aa5.54□□□□□ -1.52
CHMP1A-210ENST00000551981 KRTAP3-2Q9BYR7 98 aa5.53□□□□□ -1.52
CHMP1A-210ENST00000551981 MP68P56378 58 aa5.51□□□□□ -1.53
CHMP1A-210ENST00000551981 MT-ATP8P03928 68 aa5.48□□□□□ -1.53
CHMP1A-210ENST00000551981 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
CHMP1A-210ENST00000551981 DMAC1Q96GE9 116 aa5.44□□□□□ -1.54
CHMP1A-210ENST00000551981 FAM240AA0A1B0GVK7 77 aa5.43□□□□□ -1.54
CHMP1A-210ENST00000551981 A0A1B0GV90 55 aa5.42□□□□□ -1.54
CHMP1A-210ENST00000551981 OCR1Q9BZK8 76 aa5.4□□□□□ -1.54
CHMP1A-210ENST00000551981 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
CHMP1A-210ENST00000551981 HMCN1Q96RW7 5635 aa5.39□□□□□ -1.55
CHMP1A-210ENST00000551981 H3BPC8 53 aa5.36□□□□□ -1.55
CHMP1A-210ENST00000551981 TRAV7A0A075B6U4 112 aa5.34□□□□□ -1.55
CHMP1A-210ENST00000551981 KRTAP19-3Q7Z4W3 81 aa5.34□□□□□ -1.55
CHMP1A-210ENST00000551981 LINC00643Q86TS7 51 aa5.33□□□□□ -1.56
CHMP1A-210ENST00000551981 MT1EP04732 61 aa5.31□□□□□ -1.56
CHMP1A-210ENST00000551981 KRTAP19-7Q3SYF9 63 aa5.31□□□□□ -1.56
CHMP1A-210ENST00000551981 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
CHMP1A-210ENST00000551981 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
CHMP1A-210ENST00000551981 AHNAK2Q8IVF2 5795 aa5.3□□□□□ -1.56
CHMP1A-210ENST00000551981 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
CHMP1A-210ENST00000551981 ACYP2P14621 99 aa5.26□□□□□ -1.57
CHMP1A-210ENST00000551981 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
CHMP1A-210ENST00000551981 LCE4AQ5TA78 99 aa5.23□□□□□ -1.57
CHMP1A-210ENST00000551981 MT4P47944 62 aa5.22□□□□□ -1.57
CHMP1A-210ENST00000551981 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
CHMP1A-210ENST00000551981 J3QR89 54 aa5.18□□□□□ -1.58
CHMP1A-210ENST00000551981 SCGB1A1P11684 91 aa5.18□□□□□ -1.58
CHMP1A-210ENST00000551981 MT1GP13640 62 aa5.18□□□□□ -1.58
CHMP1A-210ENST00000551981 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
CHMP1A-210ENST00000551981 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
CHMP1A-210ENST00000551981 KRTAP5-10Q6L8G5 202 aa5.12□□□□□ -1.59
CHMP1A-210ENST00000551981 K7ERU9 68 aa5.11□□□□□ -1.59
CHMP1A-210ENST00000551981 A0A0D9SG42 100 aa5.1□□□□□ -1.59
CHMP1A-210ENST00000551981 KRTAP19-5Q3LI72 72 aa5.1□□□□□ -1.59
CHMP1A-210ENST00000551981 MT1MQ8N339 61 aa5.07□□□□□ -1.6
CHMP1A-210ENST00000551981 KRTAP5-4Q6L8H1 288 aa5.04□□□□□ -1.6
CHMP1A-210ENST00000551981 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
CHMP1A-210ENST00000551981 MT1LQ93083 61 aa5□□□□□ -1.61
CHMP1A-210ENST00000551981 KRTAP5-7Q6L8G8 165 aa4.98□□□□□ -1.61
CHMP1A-210ENST00000551981 SMIM20Q8N5G0 67 aa4.95□□□□□ -1.62
CHMP1A-210ENST00000551981 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
CHMP1A-210ENST00000551981 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
CHMP1A-210ENST00000551981 KRTAP5-3Q6L8H2 238 aa4.92□□□□□ -1.62
CHMP1A-210ENST00000551981 SPANXA2-OT1Q8N9U9 137 aa4.89□□□□□ -1.63
CHMP1A-210ENST00000551981 SEC61GP60059 68 aa4.88□□□□□ -1.63
CHMP1A-210ENST00000551981 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
CHMP1A-210ENST00000551981 SERP1Q9Y6X1 66 aa4.87□□□□□ -1.63
CHMP1A-210ENST00000551981 SPATA8Q6RVD6 105 aa4.86□□□□□ -1.63
CHMP1A-210ENST00000551981 C10orf95Q9H7T3 257 aa4.84□□□□□ -1.63
CHMP1A-210ENST00000551981 KRTAP12-1P59990 96 aa4.83□□□□□ -1.64
CHMP1A-210ENST00000551981 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
CHMP1A-210ENST00000551981 A0A1B0GU33 70 aa4.8□□□□□ -1.64
CHMP1A-210ENST00000551981 KRTAP20-2Q3LI61 65 aa4.79□□□□□ -1.64
CHMP1A-210ENST00000551981 SPRR5A0A1B0GTR4 108 aa4.78□□□□□ -1.64
CHMP1A-210ENST00000551981 COA5Q86WW8 74 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms