RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 OCR1Q9BZK8 76 aa8.59□□□□□ -1.03
DDX54-208ENST00000551344 SPRR2GQ9BYE4 73 aa8.58□□□□□ -1.04
DDX54-208ENST00000551344 MP68P56378 58 aa8.57□□□□□ -1.04
DDX54-208ENST00000551344 KLKP1Q107X0 134 aa8.57□□□□□ -1.04
DDX54-208ENST00000551344 A8MUN3 132 aa8.56□□□□□ -1.04
DDX54-208ENST00000551344 NDUFC1O43677 76 aa8.54□□□□□ -1.04
DDX54-208ENST00000551344 IMUPQ9GZP8 106 aa8.52□□□□□ -1.05
DDX54-208ENST00000551344 KRTAP19-8Q3LI54 63 aa8.51□□□□□ -1.05
DDX54-208ENST00000551344 Q5VV11 94 aa8.5□□□□□ -1.05
DDX54-208ENST00000551344 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
DDX54-208ENST00000551344 MT1BP07438 61 aa8.48□□□□□ -1.05
DDX54-208ENST00000551344 MACF1Q9UPN3 7388 aaKnown RBP8.47□□□□□ -1.05
DDX54-208ENST00000551344 H3BPC8 53 aa8.47□□□□□ -1.05
DDX54-208ENST00000551344 H0YAA0 97 aa8.46□□□□□ -1.06
DDX54-208ENST00000551344 SCGB1A1P11684 91 aa8.45□□□□□ -1.06
DDX54-208ENST00000551344 A6NN06 94 aa8.38□□□□□ -1.07
DDX54-208ENST00000551344 SYNE2Q8WXH0 6885 aaKnown RBP8.35□□□□□ -1.07
DDX54-208ENST00000551344 ADM2Q7Z4H4 148 aa8.33□□□□□ -1.08
DDX54-208ENST00000551344 DMAC1Q96GE9 116 aa8.31□□□□□ -1.08
DDX54-208ENST00000551344 K7ERU9 68 aa8.3□□□□□ -1.08
DDX54-208ENST00000551344 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
DDX54-208ENST00000551344 KRTAP6-3Q3LI67 103 aa8.29□□□□□ -1.08
DDX54-208ENST00000551344 MT-ATP8P03928 68 aa8.27□□□□□ -1.09
DDX54-208ENST00000551344 SMIM20Q8N5G0 67 aa8.25□□□□□ -1.09
DDX54-208ENST00000551344 TRAV7A0A075B6U4 112 aa8.21□□□□□ -1.1
DDX54-208ENST00000551344 C20orf197Q8N268 126 aa8.18□□□□□ -1.1
DDX54-208ENST00000551344 ACYP2P14621 99 aa8.15□□□□□ -1.1
DDX54-208ENST00000551344 P0C880 135 aa8.13□□□□□ -1.11
DDX54-208ENST00000551344 R4GN34 69 aa8.13□□□□□ -1.11
DDX54-208ENST00000551344 KRTAP3-2Q9BYR7 98 aa8.09□□□□□ -1.11
DDX54-208ENST00000551344 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
DDX54-208ENST00000551344 M0QZ58 72 aa8.05□□□□□ -1.12
DDX54-208ENST00000551344 SPTSSBQ8NFR3 76 aa8.04□□□□□ -1.12
DDX54-208ENST00000551344 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
DDX54-208ENST00000551344 SNURFQ9Y675 71 aa8.01□□□□□ -1.13
DDX54-208ENST00000551344 CHKB-CPT1BH3BT56 60 aa7.97□□□□□ -1.13
DDX54-208ENST00000551344 MT1XP80297 61 aa7.97□□□□□ -1.13
DDX54-208ENST00000551344 SERP2Q8N6R1 65 aa7.96□□□□□ -1.14
DDX54-208ENST00000551344 SPANXA2-OT1Q8N9U9 137 aa7.95□□□□□ -1.14
DDX54-208ENST00000551344 KRTAP5-9P26371 169 aa7.94□□□□□ -1.14
DDX54-208ENST00000551344 LINC01554Q52M75 96 aa7.92□□□□□ -1.14
DDX54-208ENST00000551344 NEBP20929 6669 aa7.84□□□□□ -1.15
DDX54-208ENST00000551344 MUC12Q9UKN1 5478 aa7.83□□□□□ -1.16
DDX54-208ENST00000551344 KRTAP12-2P59991 146 aa7.8□□□□□ -1.16
DDX54-208ENST00000551344 KMT2DO14686 5537 aa7.75□□□□□ -1.17
DDX54-208ENST00000551344 COX7CP15954 63 aa7.72□□□□□ -1.17
DDX54-208ENST00000551344 KRTAP8-1Q8IUC2 63 aa7.7□□□□□ -1.18
DDX54-208ENST00000551344 COA5Q86WW8 74 aa7.69□□□□□ -1.18
DDX54-208ENST00000551344 SPRR2FQ96RM1 72 aa7.69□□□□□ -1.18
DDX54-208ENST00000551344 KRTAP20-1Q3LI63 56 aa7.63□□□□□ -1.19
DDX54-208ENST00000551344 MDN1Q9NU22 5596 aa7.62□□□□□ -1.19
DDX54-208ENST00000551344 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
DDX54-208ENST00000551344 KRTAP4-8A0A0G2JLE6 195 aa7.6□□□□□ -1.19
DDX54-208ENST00000551344 KRTAP10-7P60409 375 aaPredicted RBP7.6□□□□□ -1.19
DDX54-208ENST00000551344 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
DDX54-208ENST00000551344 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
DDX54-208ENST00000551344 H7BZZ5 65 aa7.58□□□□□ -1.2
DDX54-208ENST00000551344 SEC61GP60059 68 aa7.58□□□□□ -1.2
DDX54-208ENST00000551344 SERP1Q9Y6X1 66 aa7.57□□□□□ -1.2
DDX54-208ENST00000551344 SPRR2EP22531 72 aa7.56□□□□□ -1.2
DDX54-208ENST00000551344 SPRR2BP35325 72 aa7.56□□□□□ -1.2
DDX54-208ENST00000551344 SPRR2AP35326 72 aa7.56□□□□□ -1.2
DDX54-208ENST00000551344 CYSTM1Q9H1C7 97 aa7.53□□□□□ -1.2
DDX54-208ENST00000551344 LCE1AQ5T7P2 110 aa7.49□□□□□ -1.21
DDX54-208ENST00000551344 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
DDX54-208ENST00000551344 CAMK2N1Q7Z7J9 78 aa7.48□□□□□ -1.21
DDX54-208ENST00000551344 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
DDX54-208ENST00000551344 ANAPC13Q9BS18 74 aa7.45□□□□□ -1.22
DDX54-208ENST00000551344 A0A1B0GU33 70 aa7.43□□□□□ -1.22
DDX54-208ENST00000551344 A0A0D9SG42 100 aa7.39□□□□□ -1.23
DDX54-208ENST00000551344 SPATA8Q6RVD6 105 aa7.39□□□□□ -1.23
DDX54-208ENST00000551344 A0A1B0GU69 56 aa7.31□□□□□ -1.24
DDX54-208ENST00000551344 SPRR2DP22532 72 aa7.31□□□□□ -1.24
DDX54-208ENST00000551344 SPINT4Q6UDR6 99 aa7.3□□□□□ -1.24
DDX54-208ENST00000551344 CCDC179H3BU77 68 aa7.29□□□□□ -1.24
DDX54-208ENST00000551344 KRTAP12-1P59990 96 aa7.26□□□□□ -1.25
DDX54-208ENST00000551344 KRTAP2-2Q9BYT5 123 aa7.25□□□□□ -1.25
DDX54-208ENST00000551344 KRTAP2-1Q9BYU5 128 aa7.25□□□□□ -1.25
DDX54-208ENST00000551344 SMIM26A0A096LP01 95 aa7.24□□□□□ -1.25
DDX54-208ENST00000551344 ATP5EP56381 51 aaPredicted RBP7.23□□□□□ -1.25
DDX54-208ENST00000551344 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
DDX54-208ENST00000551344 KRTAP19-7Q3SYF9 63 aa7.12□□□□□ -1.27
DDX54-208ENST00000551344 LCE3BQ5TA77 95 aa7.12□□□□□ -1.27
DDX54-208ENST00000551344 A8MU10 97 aa7.11□□□□□ -1.27
DDX54-208ENST00000551344 MT1EP04732 61 aa7.06□□□□□ -1.28
DDX54-208ENST00000551344 LINC01558Q9Y6Z2 57 aa7.06□□□□□ -1.28
DDX54-208ENST00000551344 TMEM258P61165 79 aa7.04□□□□□ -1.28
DDX54-208ENST00000551344 LCE5AQ5TCM9 118 aa7.02□□□□□ -1.29
DDX54-208ENST00000551344 KRTAP19-3Q7Z4W3 81 aa7□□□□□ -1.29
DDX54-208ENST00000551344 KRTAP19-5Q3LI72 72 aa6.96□□□□□ -1.3
DDX54-208ENST00000551344 C10orf95Q9H7T3 257 aa6.94□□□□□ -1.3
DDX54-208ENST00000551344 TNP1P09430 55 aa6.93□□□□□ -1.3
DDX54-208ENST00000551344 UQCR11O14957 56 aa6.89□□□□□ -1.31
DDX54-208ENST00000551344 MT1GP13640 62 aa6.88□□□□□ -1.31
DDX54-208ENST00000551344 LCE3AQ5TA76 89 aa6.82□□□□□ -1.32
DDX54-208ENST00000551344 DSTQ03001 7570 aaKnown RBP6.82□□□□□ -1.32
DDX54-208ENST00000551344 PP632Q6XCG6 107 aa6.81□□□□□ -1.32
DDX54-208ENST00000551344 MT1LQ93083 61 aa6.76□□□□□ -1.33
DDX54-208ENST00000551344 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
DDX54-208ENST00000551344 MT1MQ8N339 61 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 151.2 ms