RNA–Protein interactions for RNA: ENST00000550504.5

RAB5C-207, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-207ENST00000550504 LCE2CQ5TA81 110 aa5.16□□□□□ -1.58
RAB5C-207ENST00000550504 KRTAP3-1Q9BYR8 98 aa5.13□□□□□ -1.59
RAB5C-207ENST00000550504 Q1T7F1 81 aa5.11□□□□□ -1.59
RAB5C-207ENST00000550504 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
RAB5C-207ENST00000550504 LCE2DQ5TA82 110 aaPredicted RBP5.11□□□□□ -1.59
RAB5C-207ENST00000550504 SPANXA2-OT1Q8N9U9 137 aa5.11□□□□□ -1.59
RAB5C-207ENST00000550504 V9GYY9 64 aa5.09□□□□□ -1.59
RAB5C-207ENST00000550504 MT1HP80294 61 aa5.07□□□□□ -1.6
RAB5C-207ENST00000550504 DMAC1Q96GE9 116 aa5.06□□□□□ -1.6
RAB5C-207ENST00000550504 A8MUN3 132 aa5.05□□□□□ -1.6
RAB5C-207ENST00000550504 M0R2T5 61 aa5.05□□□□□ -1.6
RAB5C-207ENST00000550504 SEC61GP60059 68 aa5.05□□□□□ -1.6
RAB5C-207ENST00000550504 CRCT1Q9UGL9 99 aa5.05□□□□□ -1.6
RAB5C-207ENST00000550504 S4R3F8 94 aa5.03□□□□□ -1.6
RAB5C-207ENST00000550504 FLGP20930 4061 aaPredicted RBP5.01□□□□□ -1.61
RAB5C-207ENST00000550504 ACYP2P14621 99 aa5□□□□□ -1.61
RAB5C-207ENST00000550504 LCA10Q71F78 164 aa5□□□□□ -1.61
RAB5C-207ENST00000550504 BRK1Q8WUW1 75 aa4.99□□□□□ -1.61
RAB5C-207ENST00000550504 KRTAP3-3Q9BYR6 98 aa4.96□□□□□ -1.62
RAB5C-207ENST00000550504 CHKB-CPT1BH3BT56 60 aa4.95□□□□□ -1.62
RAB5C-207ENST00000550504 Q5VV11 94 aa4.95□□□□□ -1.62
RAB5C-207ENST00000550504 COA5Q86WW8 74 aa4.94□□□□□ -1.62
RAB5C-207ENST00000550504 CSAG1Q6PB30 78 aa4.93□□□□□ -1.62
RAB5C-207ENST00000550504 PSPHP1O15172 72 aa4.92□□□□□ -1.62
RAB5C-207ENST00000550504 KRTAP10-6P60371 365 aaPredicted RBP4.92□□□□□ -1.62
RAB5C-207ENST00000550504 PMAIP1Q13794 54 aa4.91□□□□□ -1.62
RAB5C-207ENST00000550504 LORP23490 312 aaPredicted RBP4.89□□□□□ -1.63
RAB5C-207ENST00000550504 LINC01558Q9Y6Z2 57 aa4.89□□□□□ -1.63
RAB5C-207ENST00000550504 SPTSSBQ8NFR3 76 aa4.87□□□□□ -1.63
RAB5C-207ENST00000550504 PRR15LQ9BU68 103 aa4.86□□□□□ -1.63
RAB5C-207ENST00000550504 SSPOA2VEC9 5147 aa4.84□□□□□ -1.63
RAB5C-207ENST00000550504 KRTAP9-8Q9BYQ0 159 aa4.84□□□□□ -1.63
RAB5C-207ENST00000550504 MT2AP02795 61 aa4.83□□□□□ -1.64
RAB5C-207ENST00000550504 A8MU10 97 aa4.81□□□□□ -1.64
RAB5C-207ENST00000550504 MT1FP04733 61 aa4.8□□□□□ -1.64
RAB5C-207ENST00000550504 KRTAP10-10P60014 251 aa4.8□□□□□ -1.64
RAB5C-207ENST00000550504 ADM2Q7Z4H4 148 aa4.79□□□□□ -1.64
RAB5C-207ENST00000550504 CDC42SE1Q9NRR8 79 aa4.79□□□□□ -1.64
RAB5C-207ENST00000550504 USH2AO75445 5202 aa4.78□□□□□ -1.64
RAB5C-207ENST00000550504 H0YAA0 97 aa4.78□□□□□ -1.64
RAB5C-207ENST00000550504 A6NED7 52 aa4.76□□□□□ -1.65
RAB5C-207ENST00000550504 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
RAB5C-207ENST00000550504 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.75□□□□□ -1.65
RAB5C-207ENST00000550504 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
RAB5C-207ENST00000550504 A6NN06 94 aa4.74□□□□□ -1.65
RAB5C-207ENST00000550504 P0C880 135 aa4.73□□□□□ -1.65
RAB5C-207ENST00000550504 KRTAP3-2Q9BYR7 98 aa4.73□□□□□ -1.65
RAB5C-207ENST00000550504 KRTAP9-3Q9BYQ3 159 aa4.68□□□□□ -1.66
RAB5C-207ENST00000550504 A0A1B0GU69 56 aa4.67□□□□□ -1.66
RAB5C-207ENST00000550504 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
RAB5C-207ENST00000550504 SYNE2Q8WXH0 6885 aaKnown RBP4.64□□□□□ -1.67
RAB5C-207ENST00000550504 SPATA8Q6RVD6 105 aa4.64□□□□□ -1.67
RAB5C-207ENST00000550504 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
RAB5C-207ENST00000550504 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
RAB5C-207ENST00000550504 R4GN34 69 aa4.63□□□□□ -1.67
RAB5C-207ENST00000550504 M0QZ58 72 aa4.62□□□□□ -1.67
RAB5C-207ENST00000550504 MACF1Q9UPN3 7388 aaKnown RBP4.61□□□□□ -1.67
RAB5C-207ENST00000550504 LCE2BO14633 110 aa4.6□□□□□ -1.67
RAB5C-207ENST00000550504 SPRR2GQ9BYE4 73 aa4.6□□□□□ -1.67
RAB5C-207ENST00000550504 A0A1B0GU33 70 aa4.59□□□□□ -1.67
RAB5C-207ENST00000550504 UQCR11O14957 56 aa4.56□□□□□ -1.68
RAB5C-207ENST00000550504 KRTAP13-4Q3LI77 160 aa4.56□□□□□ -1.68
RAB5C-207ENST00000550504 LINC01554Q52M75 96 aa4.56□□□□□ -1.68
RAB5C-207ENST00000550504 MIR22HGQ0VDD5 57 aa4.55□□□□□ -1.68
RAB5C-207ENST00000550504 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
RAB5C-207ENST00000550504 A0A0D9SG42 100 aa4.49□□□□□ -1.69
RAB5C-207ENST00000550504 MT1BP07438 61 aa4.49□□□□□ -1.69
RAB5C-207ENST00000550504 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
RAB5C-207ENST00000550504 PRAC1Q96KF2 57 aa4.42□□□□□ -1.7
RAB5C-207ENST00000550504 SPINT4Q6UDR6 99 aa4.4□□□□□ -1.71
RAB5C-207ENST00000550504 NEBP20929 6669 aa4.39□□□□□ -1.71
RAB5C-207ENST00000550504 H3BS24 57 aa4.38□□□□□ -1.71
RAB5C-207ENST00000550504 KRTAP12-1P59990 96 aa4.37□□□□□ -1.71
RAB5C-207ENST00000550504 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
RAB5C-207ENST00000550504 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
RAB5C-207ENST00000550504 KRTAP6-3Q3LI67 103 aa4.34□□□□□ -1.71
RAB5C-207ENST00000550504 CAMK2N1Q7Z7J9 78 aa4.33□□□□□ -1.72
RAB5C-207ENST00000550504 KRTAP10-5P60370 271 aa4.3□□□□□ -1.72
RAB5C-207ENST00000550504 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
RAB5C-207ENST00000550504 MT1XP80297 61 aa4.29□□□□□ -1.72
RAB5C-207ENST00000550504 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
RAB5C-207ENST00000550504 K7ERS5 55 aa4.25□□□□□ -1.73
RAB5C-207ENST00000550504 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
RAB5C-207ENST00000550504 ROMO1P60602 79 aa4.17□□□□□ -1.74
RAB5C-207ENST00000550504 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
RAB5C-207ENST00000550504 KRTAP10-7P60409 375 aaPredicted RBP4.13□□□□□ -1.75
RAB5C-207ENST00000550504 KMT2DO14686 5537 aa4.11□□□□□ -1.75
RAB5C-207ENST00000550504 KRTAP20-1Q3LI63 56 aa4.11□□□□□ -1.75
RAB5C-207ENST00000550504 MDN1Q9NU22 5596 aa4.1□□□□□ -1.75
RAB5C-207ENST00000550504 TNP1P09430 55 aa4.06□□□□□ -1.76
RAB5C-207ENST00000550504 KRTAP5-9P26371 169 aa4.06□□□□□ -1.76
RAB5C-207ENST00000550504 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
RAB5C-207ENST00000550504 KRTAP4-8A0A0G2JLE6 195 aa4.02□□□□□ -1.77
RAB5C-207ENST00000550504 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
RAB5C-207ENST00000550504 KRTAP8-1Q8IUC2 63 aa3.97□□□□□ -1.77
RAB5C-207ENST00000550504 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
RAB5C-207ENST00000550504 LCE3AQ5TA76 89 aa3.94□□□□□ -1.78
RAB5C-207ENST00000550504 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
RAB5C-207ENST00000550504 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
RAB5C-207ENST00000550504 SPRR2FQ96RM1 72 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms