RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 FAM236BA0A1B0GV22 79 aa8.2□□□□□ -1.1
CDK4-207ENST00000550419 TRAV7A0A075B6U4 112 aa8.17□□□□□ -1.1
CDK4-207ENST00000550419 KRTAP3-3Q9BYR6 98 aa8.17□□□□□ -1.1
CDK4-207ENST00000550419 LCE2BO14633 110 aa8.13□□□□□ -1.11
CDK4-207ENST00000550419 NDUFC1O43677 76 aa8.08□□□□□ -1.12
CDK4-207ENST00000550419 DMAC1Q96GE9 116 aa8.05□□□□□ -1.12
CDK4-207ENST00000550419 USH2AO75445 5202 aa8.03□□□□□ -1.12
CDK4-207ENST00000550419 SERP2Q8N6R1 65 aa8□□□□□ -1.13
CDK4-207ENST00000550419 H0YAA0 97 aa7.99□□□□□ -1.13
CDK4-207ENST00000550419 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
CDK4-207ENST00000550419 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
CDK4-207ENST00000550419 SPRR2GQ9BYE4 73 aa7.92□□□□□ -1.14
CDK4-207ENST00000550419 SNURFQ9Y675 71 aa7.92□□□□□ -1.14
CDK4-207ENST00000550419 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
CDK4-207ENST00000550419 ACYP2P14621 99 aa7.9□□□□□ -1.14
CDK4-207ENST00000550419 C20orf197Q8N268 126 aa7.9□□□□□ -1.14
CDK4-207ENST00000550419 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.89□□□□□ -1.15
CDK4-207ENST00000550419 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
CDK4-207ENST00000550419 KRTAP9-7A8MTY7 169 aa7.85□□□□□ -1.15
CDK4-207ENST00000550419 KRTAP19-6Q3LI70 58 aa7.84□□□□□ -1.15
CDK4-207ENST00000550419 COX7CP15954 63 aa7.82□□□□□ -1.16
CDK4-207ENST00000550419 KRTAP19-8Q3LI54 63 aa7.82□□□□□ -1.16
CDK4-207ENST00000550419 ADM2Q7Z4H4 148 aa7.82□□□□□ -1.16
CDK4-207ENST00000550419 FCGBPQ9Y6R7 5405 aaPredicted RBP7.82□□□□□ -1.16
CDK4-207ENST00000550419 Q5VV11 94 aa7.77□□□□□ -1.17
CDK4-207ENST00000550419 SPTSSBQ8NFR3 76 aa7.77□□□□□ -1.17
CDK4-207ENST00000550419 MT1BP07438 61 aa7.75□□□□□ -1.17
CDK4-207ENST00000550419 CHKB-CPT1BH3BT56 60 aa7.71□□□□□ -1.18
CDK4-207ENST00000550419 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
CDK4-207ENST00000550419 P0C880 135 aa7.68□□□□□ -1.18
CDK4-207ENST00000550419 ANAPC13Q9BS18 74 aa7.66□□□□□ -1.18
CDK4-207ENST00000550419 H7BZZ5 65 aa7.64□□□□□ -1.19
CDK4-207ENST00000550419 R4GN34 69 aa7.63□□□□□ -1.19
CDK4-207ENST00000550419 CYSTM1Q9H1C7 97 aa7.6□□□□□ -1.19
CDK4-207ENST00000550419 MACF1Q9UPN3 7388 aaKnown RBP7.59□□□□□ -1.19
CDK4-207ENST00000550419 COA5Q86WW8 74 aa7.57□□□□□ -1.2
CDK4-207ENST00000550419 A6NN06 94 aa7.55□□□□□ -1.2
CDK4-207ENST00000550419 M0QZ58 72 aa7.55□□□□□ -1.2
CDK4-207ENST00000550419 KRTAP10-5P60370 271 aa7.53□□□□□ -1.2
CDK4-207ENST00000550419 SYNE2Q8WXH0 6885 aaKnown RBP7.52□□□□□ -1.2
CDK4-207ENST00000550419 CCDC179H3BU77 68 aa7.48□□□□□ -1.21
CDK4-207ENST00000550419 PLAC4Q8WY50 150 aa7.45□□□□□ -1.22
CDK4-207ENST00000550419 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
CDK4-207ENST00000550419 ATP5EP56381 51 aaPredicted RBP7.38□□□□□ -1.23
CDK4-207ENST00000550419 PRO2289Q9P1D8 64 aa7.38□□□□□ -1.23
CDK4-207ENST00000550419 SEC61GP60059 68 aa7.36□□□□□ -1.23
CDK4-207ENST00000550419 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
CDK4-207ENST00000550419 MT1XP80297 61 aa7.33□□□□□ -1.24
CDK4-207ENST00000550419 SERP1Q9Y6X1 66 aa7.33□□□□□ -1.24
CDK4-207ENST00000550419 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
CDK4-207ENST00000550419 TMEM258P61165 79 aa7.27□□□□□ -1.25
CDK4-207ENST00000550419 A0A1B0GU33 70 aa7.21□□□□□ -1.26
CDK4-207ENST00000550419 A0A1B0GU69 56 aa7.19□□□□□ -1.26
CDK4-207ENST00000550419 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
CDK4-207ENST00000550419 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
CDK4-207ENST00000550419 NEBP20929 6669 aa7.07□□□□□ -1.28
CDK4-207ENST00000550419 KRTAP5-9P26371 169 aa7.07□□□□□ -1.28
CDK4-207ENST00000550419 PRR15LQ9BU68 103 aa7.07□□□□□ -1.28
CDK4-207ENST00000550419 LINC01558Q9Y6Z2 57 aa7.07□□□□□ -1.28
CDK4-207ENST00000550419 A0A0D9SG42 100 aa7.06□□□□□ -1.28
CDK4-207ENST00000550419 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
CDK4-207ENST00000550419 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
CDK4-207ENST00000550419 SMIM26A0A096LP01 95 aa7.02□□□□□ -1.29
CDK4-207ENST00000550419 KRTAP10-12P60413 245 aa7□□□□□ -1.29
CDK4-207ENST00000550419 KRTAP12-1P59990 96 aa6.98□□□□□ -1.29
CDK4-207ENST00000550419 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
CDK4-207ENST00000550419 SPINT4Q6UDR6 99 aa6.95□□□□□ -1.3
CDK4-207ENST00000550419 KRTAP8-1Q8IUC2 63 aa6.94□□□□□ -1.3
CDK4-207ENST00000550419 KMT2DO14686 5537 aa6.9□□□□□ -1.3
CDK4-207ENST00000550419 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
CDK4-207ENST00000550419 A8MU10 97 aa6.89□□□□□ -1.31
CDK4-207ENST00000550419 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
CDK4-207ENST00000550419 KRTAP20-1Q3LI63 56 aa6.88□□□□□ -1.31
CDK4-207ENST00000550419 MDN1Q9NU22 5596 aa6.87□□□□□ -1.31
CDK4-207ENST00000550419 SPRR2FQ96RM1 72 aa6.86□□□□□ -1.31
CDK4-207ENST00000550419 UQCR11O14957 56 aa6.85□□□□□ -1.31
CDK4-207ENST00000550419 V9GYY9 64 aa6.84□□□□□ -1.31
CDK4-207ENST00000550419 PCP4P48539 62 aa6.82□□□□□ -1.32
CDK4-207ENST00000550419 Q1T7F1 81 aa6.8□□□□□ -1.32
CDK4-207ENST00000550419 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
CDK4-207ENST00000550419 PSPHP1O15172 72 aa6.69□□□□□ -1.34
CDK4-207ENST00000550419 SPRR2EP22531 72 aa6.69□□□□□ -1.34
CDK4-207ENST00000550419 SPRR2BP35325 72 aa6.69□□□□□ -1.34
CDK4-207ENST00000550419 SPRR2AP35326 72 aa6.69□□□□□ -1.34
CDK4-207ENST00000550419 MIR22HGQ0VDD5 57 aa6.69□□□□□ -1.34
CDK4-207ENST00000550419 KRTAP2-3P0C7H8 128 aa6.68□□□□□ -1.34
CDK4-207ENST00000550419 LCE1AQ5T7P2 110 aa6.68□□□□□ -1.34
CDK4-207ENST00000550419 KRTAP2-4Q9BYR9 128 aa6.68□□□□□ -1.34
CDK4-207ENST00000550419 C10orf95Q9H7T3 257 aa6.63□□□□□ -1.35
CDK4-207ENST00000550419 TNP1P09430 55 aa6.59□□□□□ -1.35
CDK4-207ENST00000550419 KRTAP19-7Q3SYF9 63 aa6.55□□□□□ -1.36
CDK4-207ENST00000550419 K7ERS5 55 aa6.54□□□□□ -1.36
CDK4-207ENST00000550419 A6NED7 52 aa6.5□□□□□ -1.37
CDK4-207ENST00000550419 MT1EP04732 61 aa6.48□□□□□ -1.37
CDK4-207ENST00000550419 SPRR2DP22532 72 aa6.47□□□□□ -1.37
CDK4-207ENST00000550419 KRTAP2-2Q9BYT5 123 aa6.46□□□□□ -1.38
CDK4-207ENST00000550419 KRTAP2-1Q9BYU5 128 aa6.46□□□□□ -1.38
CDK4-207ENST00000550419 KRTAP19-5Q3LI72 72 aa6.44□□□□□ -1.38
CDK4-207ENST00000550419 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
CDK4-207ENST00000550419 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms