RNA–Protein interactions for RNA: ENST00000550309.1

AL355112.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL355112.1, Length 1,236 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL355112.1-201ENST00000550309 PKHD1P08F94 4074 aa2.65□□□□□ -1.98
AL355112.1-201ENST00000550309 A0A087WTM6 91 aa2.65□□□□□ -1.99
AL355112.1-201ENST00000550309 CASC2Q6XLA1 102 aa2.65□□□□□ -1.99
AL355112.1-201ENST00000550309 Q8IZM0 81 aa2.65□□□□□ -1.99
AL355112.1-201ENST00000550309 MUC19Q7Z5P9 8384 aa2.65□□□□□ -1.99
AL355112.1-201ENST00000550309 DNAH11Q96DT5 4516 aa2.65□□□□□ -1.99
AL355112.1-201ENST00000550309 A0A087WSZ3 146 aa2.64□□□□□ -1.99
AL355112.1-201ENST00000550309 NDUFB1O75438 58 aa2.64□□□□□ -1.99
AL355112.1-201ENST00000550309 COX17Q14061 63 aa2.64□□□□□ -1.99
AL355112.1-201ENST00000550309 C1orf137Q5JT78 98 aa2.64□□□□□ -1.99
AL355112.1-201ENST00000550309 Q6ZRN7 208 aaPredicted RBP2.64□□□□□ -1.99
AL355112.1-201ENST00000550309 ANGP03950 147 aaKnown RBP2.63□□□□□ -1.99
AL355112.1-201ENST00000550309 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
AL355112.1-201ENST00000550309 ZCCHC13Q8WW36 166 aaKnown RBP2.63□□□□□ -1.99
AL355112.1-201ENST00000550309 HERC2O95714 4834 aa2.62□□□□□ -1.99
AL355112.1-201ENST00000550309 LINC00959A0A1B0GUT2 108 aa2.62□□□□□ -1.99
AL355112.1-201ENST00000550309 HAMPP81172 84 aa2.62□□□□□ -1.99
AL355112.1-201ENST00000550309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.62□□□□□ -1.99
AL355112.1-201ENST00000550309 TOMM7Q9P0U1 55 aa2.62□□□□□ -1.99
AL355112.1-201ENST00000550309 DNAH5Q8TE73 4624 aa2.61□□□□□ -1.99
AL355112.1-201ENST00000550309 COX7BP24311 80 aa2.61□□□□□ -1.99
AL355112.1-201ENST00000550309 RYR1P21817 5038 aa2.6□□□□□ -1.99
AL355112.1-201ENST00000550309 KIAA1109Q2LD37 5005 aa2.6□□□□□ -1.99
AL355112.1-201ENST00000550309 LRP1BQ9NZR2 4599 aa2.6□□□□□ -1.99
AL355112.1-201ENST00000550309 Q5VSD8 79 aa2.6□□□□□ -1.99
AL355112.1-201ENST00000550309 PLAC8Q9NZF1 115 aa2.6□□□□□ -1.99
AL355112.1-201ENST00000550309 HSPG2P98160 4391 aa2.59□□□□□ -1.99
AL355112.1-201ENST00000550309 APOBP04114 4563 aaKnown RBP2.59□□□□□ -1.99
AL355112.1-201ENST00000550309 CNBPP62633 177 aaKnown RBP2.59□□□□□ -1.99
AL355112.1-201ENST00000550309 CLPSL2Q6UWE3 100 aa2.59□□□□□ -1.99
AL355112.1-201ENST00000550309 Q6ZQY7 126 aa2.59□□□□□ -1.99
AL355112.1-201ENST00000550309 PRR15LQ9BU68 103 aa2.59□□□□□ -1.99
AL355112.1-201ENST00000550309 GVQW2A0A096LPI5 108 aaPredicted RBP2.58□□□□□ -2
AL355112.1-201ENST00000550309 LINC01558Q9Y6Z2 57 aa2.58□□□□□ -2
AL355112.1-201ENST00000550309 IGKV3OR2-268A0A0C4DH90 116 aa2.57□□□□□ -2
AL355112.1-201ENST00000550309 KRTAP13-4Q3LI77 160 aa2.57□□□□□ -2
AL355112.1-201ENST00000550309 PCLOQ9Y6V0 5065 aa2.57□□□□□ -2
AL355112.1-201ENST00000550309 IGLV5-48A0A075B6I7 105 aa2.56□□□□□ -2
AL355112.1-201ENST00000550309 SMR3BP02814 79 aaPredicted RBP2.56□□□□□ -2
AL355112.1-201ENST00000550309 Q6ZSA8 131 aa2.56□□□□□ -2
AL355112.1-201ENST00000550309 LINC00208Q96KT6 92 aa2.56□□□□□ -2
AL355112.1-201ENST00000550309 ETDCA0A1B0GVM5 59 aa2.55□□□□□ -2
AL355112.1-201ENST00000550309 RPL37AP61513 92 aaKnown RBP2.55□□□□□ -2
AL355112.1-201ENST00000550309 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
AL355112.1-201ENST00000550309 KRTAP26-1Q6PEX3 210 aa2.55□□□□□ -2
AL355112.1-201ENST00000550309 DNAH8Q96JB1 4490 aa2.54□□□□□ -2
AL355112.1-201ENST00000550309 KCNQ1DNQ9H478 68 aa2.54□□□□□ -2
AL355112.1-201ENST00000550309 ABCA13Q86UQ4 5058 aa2.54□□□□□ -2
AL355112.1-201ENST00000550309 SPAG11BQ08648 103 aa2.53□□□□□ -2
AL355112.1-201ENST00000550309 SPRR4Q96PI1 79 aa2.53□□□□□ -2
AL355112.1-201ENST00000550309 VPS13BQ7Z7G8 4022 aa2.52□□□□□ -2.01
AL355112.1-201ENST00000550309 UNQ6190/PRO20217Q6UXQ8 127 aa2.52□□□□□ -2.01
AL355112.1-201ENST00000550309 C6orf48Q9UBA6 75 aa2.52□□□□□ -2.01
AL355112.1-201ENST00000550309 PCOTHQ58A44 107 aa2.51□□□□□ -2.01
AL355112.1-201ENST00000550309 PKHD1L1Q86WI1 4243 aa2.5□□□□□ -2.01
AL355112.1-201ENST00000550309 A0A096LNI7 61 aa2.49□□□□□ -2.01
AL355112.1-201ENST00000550309 H0Y9P7 68 aa2.49□□□□□ -2.01
AL355112.1-201ENST00000550309 K7EQZ3 153 aa2.49□□□□□ -2.01
AL355112.1-201ENST00000550309 SPRR1AP35321 89 aa2.49□□□□□ -2.01
AL355112.1-201ENST00000550309 CSAG1Q6PB30 78 aa2.49□□□□□ -2.01
AL355112.1-201ENST00000550309 SPAG11AQ6PDA7 123 aa2.49□□□□□ -2.01
AL355112.1-201ENST00000550309 FAT1Q14517 4588 aa2.49□□□□□ -2.01
AL355112.1-201ENST00000550309 KRTAP12-1P59990 96 aa2.48□□□□□ -2.01
AL355112.1-201ENST00000550309 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
AL355112.1-201ENST00000550309 SPATA8Q6RVD6 105 aa2.48□□□□□ -2.01
AL355112.1-201ENST00000550309 SPINK7P58062 85 aa2.47□□□□□ -2.01
AL355112.1-201ENST00000550309 SPINK6Q6UWN8 80 aa2.47□□□□□ -2.01
AL355112.1-201ENST00000550309 Q6ZRX8 168 aa2.47□□□□□ -2.01
AL355112.1-201ENST00000550309 KRTAP10-4P60372 401 aaPredicted RBP2.46□□□□□ -2.02
AL355112.1-201ENST00000550309 MYCBP2O75592 4640 aa2.45□□□□□ -2.02
AL355112.1-201ENST00000550309 DMAC1Q96GE9 116 aa2.45□□□□□ -2.02
AL355112.1-201ENST00000550309 FAT3Q8TDW7 4589 aa2.44□□□□□ -2.02
AL355112.1-201ENST00000550309 UQCR11O14957 56 aa2.44□□□□□ -2.02
AL355112.1-201ENST00000550309 FLG2Q5D862 2391 aaPredicted RBP2.43□□□□□ -2.02
AL355112.1-201ENST00000550309 DMBT1Q9UGM3 2413 aaPredicted RBP2.43□□□□□ -2.02
AL355112.1-201ENST00000550309 INE1O15225 51 aa2.42□□□□□ -2.02
AL355112.1-201ENST00000550309 WFDC13Q8IUB5 93 aa2.42□□□□□ -2.02
AL355112.1-201ENST00000550309 DEFB105AQ8NG35 78 aa2.42□□□□□ -2.02
AL355112.1-201ENST00000550309 SRRM2Q9UQ35 2752 aaKnown RBP2.41□□□□□ -2.02
AL355112.1-201ENST00000550309 MMP24-AS1A0A0U1RRL7 71 aa2.41□□□□□ -2.02
AL355112.1-201ENST00000550309 LINC00472Q9H8W2 130 aa2.41□□□□□ -2.02
AL355112.1-201ENST00000550309 HERC1Q15751 4861 aa2.4□□□□□ -2.03
AL355112.1-201ENST00000550309 SPRR1BP22528 89 aa2.4□□□□□ -2.03
AL355112.1-201ENST00000550309 LRP1Q07954 4544 aaKnown RBP2.39□□□□□ -2.03
AL355112.1-201ENST00000550309 MT1HL1P0DM35 61 aa2.39□□□□□ -2.03
AL355112.1-201ENST00000550309 KRTAP13-1Q8IUC0 172 aa2.39□□□□□ -2.03
AL355112.1-201ENST00000550309 TP53AIP1Q9HCN2 124 aa2.39□□□□□ -2.03
AL355112.1-201ENST00000550309 TNXBP22105 4242 aa2.38□□□□□ -2.03
AL355112.1-201ENST00000550309 Q96NJ1 140 aa2.35□□□□□ -2.03
AL355112.1-201ENST00000550309 HMCN2Q8NDA2 5059 aa2.35□□□□□ -2.03
AL355112.1-201ENST00000550309 PRLHP81277 87 aa2.34□□□□□ -2.03
AL355112.1-201ENST00000550309 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
AL355112.1-201ENST00000550309 KRTAP12-3P60328 96 aa2.32□□□□□ -2.04
AL355112.1-201ENST00000550309 A0A1B0GU69 56 aa2.31□□□□□ -2.04
AL355112.1-201ENST00000550309 MRPL34Q9BQ48 92 aaKnown RBP2.31□□□□□ -2.04
AL355112.1-201ENST00000550309 ACYP2P14621 99 aa2.3□□□□□ -2.04
AL355112.1-201ENST00000550309 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
AL355112.1-201ENST00000550309 SPINK1P00995 79 aa2.28□□□□□ -2.04
AL355112.1-201ENST00000550309 RPS29P62273 56 aaKnown RBP2.28□□□□□ -2.04
AL355112.1-201ENST00000550309 SSBP3-AS1Q7Z2R9 100 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms